| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is ubiG [H]
Identifier: 159900787
GI number: 159900787
Start: 5456388
End: 5457056
Strand: Direct
Name: ubiG [H]
Synonym: Haur_4274
Alternate gene names: 159900787
Gene position: 5456388-5457056 (Clockwise)
Preceding gene: 159900786
Following gene: 159900788
Centisome position: 85.97
GC content: 55.31
Gene sequence:
>669_bases ATGAGCACTAAGATCGACGAAACCAGCTATTTTGCGCCGCAGGTCAGCAAATCCGACCGCAAAATTGCTGTGCAATACCG CCGGATGTTCGCGTTTGGTGGCTTGGCCAAGCACTTACCCCAAGGGCCAGTGCTCGATGTGGGTTGTGGCGCGGGGCCGG GGTTGCGCTATATTCGCAGCCGTGGCGCAACCGCAATTGGCGTAGACCCCAGCATTTATGCTTTGCGCGAAGCAGCCAAA TTGATTGATGTCGATCTGGTGCAGATGGATGCTGCGCCGCGGTTTCCGTTTGCCGACCAAACCTTTGGCATGGTGCTCGC CAACGAGGTGATTGAACATGTGCCCGATGGCGTGGAATTTCTGCTGGAATGCGCTCGGGTACTACAACCTGGCGGCATGG TCTTTCTGACCACTCCCAATCTGTGGGATATCCGACGGGTGCTGGCTCCCTTGGTTGGCAAAGTTTGGTCGGGCGATACC GACCCCACCCATATTAATTTGTATACCCCTTGGCGCTTGCGAAACGATCTCAAAGCCGCCGGCTTTAAACAACCACGGAT CAAAACTGGCTTTAAACCCATTCGCTGGTTGCCACCACATCGCAACCCGCTTGCTATTCCCTACCCGCCCTTGATCGGAA ATGGGATGGTAGCCACTGGAGTACGTTAA
Upstream 100 bases:
>100_bases GCTGCCAAACTCCGCAGCGGTGGGCAGCAAACATGCGAGGTATGGTATAATCCGGCCCGATGGACGACCGCCTTAGAGCA GGTCTATACGCGAGTAATCA
Downstream 100 bases:
>100_bases GTGCAATCGAACAAACCGCAGCGGAGCCTCACCAGTGAGGTTTGGAGCGCAACGCTTTGGAATACGCTGCTGTTTCCAGC CCGCTTTTTAGTTGGCATCA
Product: type 11 methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MSTKIDETSYFAPQVSKSDRKIAVQYRRMFAFGGLAKHLPQGPVLDVGCGAGPGLRYIRSRGATAIGVDPSIYALREAAK LIDVDLVQMDAAPRFPFADQTFGMVLANEVIEHVPDGVEFLLECARVLQPGGMVFLTTPNLWDIRRVLAPLVGKVWSGDT DPTHINLYTPWRLRNDLKAAGFKQPRIKTGFKPIRWLPPHRNPLAIPYPPLIGNGMVATGVR
Sequences:
>Translated_222_residues MSTKIDETSYFAPQVSKSDRKIAVQYRRMFAFGGLAKHLPQGPVLDVGCGAGPGLRYIRSRGATAIGVDPSIYALREAAK LIDVDLVQMDAAPRFPFADQTFGMVLANEVIEHVPDGVEFLLECARVLQPGGMVFLTTPNLWDIRRVLAPLVGKVWSGDT DPTHINLYTPWRLRNDLKAAGFKQPRIKTGFKPIRWLPPHRNPLAIPYPPLIGNGMVATGVR >Mature_221_residues STKIDETSYFAPQVSKSDRKIAVQYRRMFAFGGLAKHLPQGPVLDVGCGAGPGLRYIRSRGATAIGVDPSIYALREAAKL IDVDLVQMDAAPRFPFADQTFGMVLANEVIEHVPDGVEFLLECARVLQPGGMVFLTTPNLWDIRRVLAPLVGKVWSGDTD PTHINLYTPWRLRNDLKAAGFKQPRIKTGFKPIRWLPPHRNPLAIPYPPLIGNGMVATGVR
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=149, Percent_Identity=33.5570469798658, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 24501; Mature: 24370
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKIDETSYFAPQVSKSDRKIAVQYRRMFAFGGLAKHLPQGPVLDVGCGAGPGLRYIRS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCCCCHHHHHHH RGATAIGVDPSIYALREAAKLIDVDLVQMDAAPRFPFADQTFGMVLANEVIEHVPDGVEF CCCEEECCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHH LLECARVLQPGGMVFLTTPNLWDIRRVLAPLVGKVWSGDTDPTHINLYTPWRLRNDLKAA HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHC GFKQPRIKTGFKPIRWLPPHRNPLAIPYPPLIGNGMVATGVR CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEECCCC >Mature Secondary Structure STKIDETSYFAPQVSKSDRKIAVQYRRMFAFGGLAKHLPQGPVLDVGCGAGPGLRYIRS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCCCCHHHHHHH RGATAIGVDPSIYALREAAKLIDVDLVQMDAAPRFPFADQTFGMVLANEVIEHVPDGVEF CCCEEECCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHH LLECARVLQPGGMVFLTTPNLWDIRRVLAPLVGKVWSGDTDPTHINLYTPWRLRNDLKAA HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHC GFKQPRIKTGFKPIRWLPPHRNPLAIPYPPLIGNGMVATGVR CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA