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The map label for this gene is 159900779

Identifier: 159900779

GI number: 159900779

Start: 5441055

End: 5441879

Strand: Reverse

Name: 159900779

Synonym: Haur_4266

Alternate gene names: NA

Gene position: 5441879-5441055 (Counterclockwise)

Preceding gene: 159900800

Following gene: 159900777

Centisome position: 85.74

GC content: 48.48

Gene sequence:

>825_bases
ATGATCGATAATCGTGGAAGTGATCGCTATATTATTGATACTCCCGAAAGTATTGAGTTTGGCTATGATGTGGCTGGAAT
CGGCACACGCTTTGTGGCGGCGGTTATCGATACGGCCTTCTTCTCAATTTTGTTATTTATTGCGCAACGGGTCTATATCG
GGACTGATAACAATCCCAGCGATGCTGCCTATCGGATTTTCTTTTTCTTCTGTATTTTTACAGTCTTGGTTTATTATATC
GCCTTTGAGCGCTTTTGGAATGGGCAAACGCCTGGCAAGCGGCTTTTGGGGATTCGGGTGGTGCAAGAGGCTGGCAAGCC
ATTAACCTTCACTGGTAGCTTGATTCGGAATTTACTGCGGTTAATTGATTTTGTGCCAGCGTATTATTCAACTGGGTTGC
TCACGATGTTGATCGATAAGCGTGCCCGCCGTTTGGGAGATTTGGCTGCTAGCACGTTTGTGGTGCGCGATCGCCAACGG
GTGACGCTTGAAATGTTGTTGCAATCGACCCGCGATGATAAAGTTGCGAGTGCGCTCAAAGATAGTGGTGCAACCTTGCC
CAATATTACTGCCTTACGCCCAAGCGATATGGATTTAGTGCAAAACTTTTTGCTGCGCCGTGCTGTTTTAGCCCCCGATC
GACGCTTGCGGATTGCAACTCAATTGGCTTATGCGCTGTTTGGACGGCTTGGCTACAGCGTGCCTGGTGATCCTGAGCAG
TTTTTGCAACAAGCTAGTGATCAGTATGTATTGGTGCGTGCTCAGGCATTGCAAGCAGCTCCTGCACCTGTGCCAGTAAA
TCCGTATGACGGGCATCGAGGCTAA

Upstream 100 bases:

>100_bases
TTAGCTGGGTTAATCGTTCCCAAGCATGATGTTTGGCATTGATAAAATCTTCTGCTACCATAAAGCTACTCCTCTACTAA
TATATTGTTTGGAGATAGAG

Downstream 100 bases:

>100_bases
CCCGCTTGGGCAAACGCCGAAACCACGCCCCTTGTTTGCGAGCAAAACGATGGGTGTTGAATTTGAGTTGGCTGATGCAA
GCGCCAGCACTTTGTTGGCC

Product: RDD domain-containing protein

Products: NA

Alternate protein names: RDD Domain-Containing Protein; RDD Family Protein; Transmembrane Protein; Rdd Family Protein; RDD Domain Protein; Rdd Domain Protein

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MIDNRGSDRYIIDTPESIEFGYDVAGIGTRFVAAVIDTAFFSILLFIAQRVYIGTDNNPSDAAYRIFFFFCIFTVLVYYI
AFERFWNGQTPGKRLLGIRVVQEAGKPLTFTGSLIRNLLRLIDFVPAYYSTGLLTMLIDKRARRLGDLAASTFVVRDRQR
VTLEMLLQSTRDDKVASALKDSGATLPNITALRPSDMDLVQNFLLRRAVLAPDRRLRIATQLAYALFGRLGYSVPGDPEQ
FLQQASDQYVLVRAQALQAAPAPVPVNPYDGHRG

Sequences:

>Translated_274_residues
MIDNRGSDRYIIDTPESIEFGYDVAGIGTRFVAAVIDTAFFSILLFIAQRVYIGTDNNPSDAAYRIFFFFCIFTVLVYYI
AFERFWNGQTPGKRLLGIRVVQEAGKPLTFTGSLIRNLLRLIDFVPAYYSTGLLTMLIDKRARRLGDLAASTFVVRDRQR
VTLEMLLQSTRDDKVASALKDSGATLPNITALRPSDMDLVQNFLLRRAVLAPDRRLRIATQLAYALFGRLGYSVPGDPEQ
FLQQASDQYVLVRAQALQAAPAPVPVNPYDGHRG
>Mature_274_residues
MIDNRGSDRYIIDTPESIEFGYDVAGIGTRFVAAVIDTAFFSILLFIAQRVYIGTDNNPSDAAYRIFFFFCIFTVLVYYI
AFERFWNGQTPGKRLLGIRVVQEAGKPLTFTGSLIRNLLRLIDFVPAYYSTGLLTMLIDKRARRLGDLAASTFVVRDRQR
VTLEMLLQSTRDDKVASALKDSGATLPNITALRPSDMDLVQNFLLRRAVLAPDRRLRIATQLAYALFGRLGYSVPGDPEQ
FLQQASDQYVLVRAQALQAAPAPVPVNPYDGHRG

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30701; Mature: 30701

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCEEEEEHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHCCCCEEEEEHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA