| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900762
Identifier: 159900762
GI number: 159900762
Start: 5421810
End: 5423483
Strand: Reverse
Name: 159900762
Synonym: Haur_4249
Alternate gene names: NA
Gene position: 5423483-5421810 (Counterclockwise)
Preceding gene: 159900763
Following gene: 159900761
Centisome position: 85.46
GC content: 50.78
Gene sequence:
>1674_bases ATGCCAGAGATTGATTACACACGCTATTATCGTTTCGCTGAGTTGGTGGAAGCGCTAGAAGGCTTTGCCGCCGAATATCC CGATTTGATTAGTTTGCAATCGATCGGTAAAAGTTATGAAGGCCGTGATTTGTGGTTAGCGACCGTTACTAATGTTGCAA CTGGTGGGCCACGCGAAAAGCCAGCCTTTTGGGTTGATGCCAATATCCATGCGAGCGAAGTAACTGGCGCAATGGCTGGC TTACACTTGATCGATACGCTGCTCAAAGGCTATGGCAACGATGCTGAATGCACGCGGTTGCTTGATCGCACGACCTTCTA CATTTTGCCACGCTTCAATCCTGATGGAGCTGAACGGGCCTTGACCACGCCCTATGTAGTGCGGTCGAGCGTGCGACCTT ATCCCTATGCTGAACGCATCGATGGCTTGTATCAAGAAGATATCAACGGCGATGGGATTATTTTGCAGATGCGCTTGGTT GATCCCAACGGCGATTGGCGGGTCTCCGAGCATGATCCACGGGTGATGGTCAAGCGCAAGCCCTATGAAATTGGCGGCAC CTACTATCGAATTTTGCCCGAAGGCTTGATTCAAAATTACGATGGGGTCAATATCAAACTGAGCCGCGCAGTCGAAGGCT TGGATATCAACCGCAACTTTCCAGTTGATTGGCGACCTGAAGCCGAGCAATATGGTGCTGGCCCCTACCCAACCTCTGAG CCAGAAATCCGCGCTGTGGTGCAATTTATCGTCGATCACCCCGAAATTCATAGTGGCCTGACCTACCACACTTATTCGGG CGTGCTGCTGCGACCATATGGCGACCGCGCCGATGATCAGATGAATTTGCATGATCTCGATGTGTTTAAGGCGTTGGGTA AACATGGAACCGAGTTAACCGGTTGGCCCAGTGTTTCGGTTTACCACGATTTTCGTTACCACCCCAAAGATGTGATTACC GGGGTGTTTGATGATTGGGTCTACGATCACTTGGGTATGTTTGCCTGGACAGTCGAATTTTGGGATTTAGTTGGTTCGGC AGGGATCAAAGATCGCAAATTTATCGAGTGGTTCAAAGAGCACCCCGAAGAAGATGATCTTAAAATTATGCAATGGGTGG ATGAGCATGGCGAGGGCTTGTGCTTCTACGATTGGACAGCCTTCGAACATCCCCAGCTTGGCCCAGTTGAAATTGGTGGC TGGCATCCGATGTATGCCTTCCGTAACCCACCGCCAGCCAAATTGCTTGAAACGATTGCGCCTGTGACCCAATTTGCCTT AGCTCATGCCGCGATTGCCCCATTCACCACAATTAGCAGCTTTGAGCTTGAGGCGTTGGGCGATAACGTTTATCGGCTGC AAGCAGTGGTGCAAAATGAAGGTTATTTACCAAGTTATGGCTCGCAAAAAGGCCGCGAACGCAAGGCGACCTTGCCACTT GAAGCCTTGCTCAATCTACCCGAAGGTTCAAGCCTCAAGCTTGGCCAAGCCAAAACCACGATTGGCGATTTGGAAGGGCG TTCAGGCCGAGTTTCATTCTTTGGCTTTAGCAATGGTTCGACCACTGATCGCACCAAAGTCGAGTGGGTGGTGCATGTGC CAAATCCTGGGGTGATTGAATTGACGATCCAAGGTGGACGCGGTGGCATTGCCCGCGCTAAGCTCGAAATCTAA
Upstream 100 bases:
>100_bases ACTCATCCGAGGGTTTTTTGGTTTAATTTGGGCTTGCATCTTGGTAGAACAATAATGCATAATATGCAATATCATGCATA GAGTTAGCAATGGAGTGGCT
Downstream 100 bases:
>100_bases ACTAAAAATCAAGTGATTTCCTTGAACCGCTAGCAGCGATAGCTGTTAGCGGTTTTTGTGTGGCTAGATAAAGCTCCAAC ATTTAAGCCGAAATTTTTGG
Product: peptidase M14 carboxypeptidase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 557; Mature: 556
Protein sequence:
>557_residues MPEIDYTRYYRFAELVEALEGFAAEYPDLISLQSIGKSYEGRDLWLATVTNVATGGPREKPAFWVDANIHASEVTGAMAG LHLIDTLLKGYGNDAECTRLLDRTTFYILPRFNPDGAERALTTPYVVRSSVRPYPYAERIDGLYQEDINGDGIILQMRLV DPNGDWRVSEHDPRVMVKRKPYEIGGTYYRILPEGLIQNYDGVNIKLSRAVEGLDINRNFPVDWRPEAEQYGAGPYPTSE PEIRAVVQFIVDHPEIHSGLTYHTYSGVLLRPYGDRADDQMNLHDLDVFKALGKHGTELTGWPSVSVYHDFRYHPKDVIT GVFDDWVYDHLGMFAWTVEFWDLVGSAGIKDRKFIEWFKEHPEEDDLKIMQWVDEHGEGLCFYDWTAFEHPQLGPVEIGG WHPMYAFRNPPPAKLLETIAPVTQFALAHAAIAPFTTISSFELEALGDNVYRLQAVVQNEGYLPSYGSQKGRERKATLPL EALLNLPEGSSLKLGQAKTTIGDLEGRSGRVSFFGFSNGSTTDRTKVEWVVHVPNPGVIELTIQGGRGGIARAKLEI
Sequences:
>Translated_557_residues MPEIDYTRYYRFAELVEALEGFAAEYPDLISLQSIGKSYEGRDLWLATVTNVATGGPREKPAFWVDANIHASEVTGAMAG LHLIDTLLKGYGNDAECTRLLDRTTFYILPRFNPDGAERALTTPYVVRSSVRPYPYAERIDGLYQEDINGDGIILQMRLV DPNGDWRVSEHDPRVMVKRKPYEIGGTYYRILPEGLIQNYDGVNIKLSRAVEGLDINRNFPVDWRPEAEQYGAGPYPTSE PEIRAVVQFIVDHPEIHSGLTYHTYSGVLLRPYGDRADDQMNLHDLDVFKALGKHGTELTGWPSVSVYHDFRYHPKDVIT GVFDDWVYDHLGMFAWTVEFWDLVGSAGIKDRKFIEWFKEHPEEDDLKIMQWVDEHGEGLCFYDWTAFEHPQLGPVEIGG WHPMYAFRNPPPAKLLETIAPVTQFALAHAAIAPFTTISSFELEALGDNVYRLQAVVQNEGYLPSYGSQKGRERKATLPL EALLNLPEGSSLKLGQAKTTIGDLEGRSGRVSFFGFSNGSTTDRTKVEWVVHVPNPGVIELTIQGGRGGIARAKLEI >Mature_556_residues PEIDYTRYYRFAELVEALEGFAAEYPDLISLQSIGKSYEGRDLWLATVTNVATGGPREKPAFWVDANIHASEVTGAMAGL HLIDTLLKGYGNDAECTRLLDRTTFYILPRFNPDGAERALTTPYVVRSSVRPYPYAERIDGLYQEDINGDGIILQMRLVD PNGDWRVSEHDPRVMVKRKPYEIGGTYYRILPEGLIQNYDGVNIKLSRAVEGLDINRNFPVDWRPEAEQYGAGPYPTSEP EIRAVVQFIVDHPEIHSGLTYHTYSGVLLRPYGDRADDQMNLHDLDVFKALGKHGTELTGWPSVSVYHDFRYHPKDVITG VFDDWVYDHLGMFAWTVEFWDLVGSAGIKDRKFIEWFKEHPEEDDLKIMQWVDEHGEGLCFYDWTAFEHPQLGPVEIGGW HPMYAFRNPPPAKLLETIAPVTQFALAHAAIAPFTTISSFELEALGDNVYRLQAVVQNEGYLPSYGSQKGRERKATLPLE ALLNLPEGSSLKLGQAKTTIGDLEGRSGRVSFFGFSNGSTTDRTKVEWVVHVPNPGVIELTIQGGRGGIARAKLEI
Specific function: Combines the specificities of mammalian Cpase A and B [H]
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M14 family [H]
Homologues:
Organism=Homo sapiens, GI22202611, Length=112, Percent_Identity=34.8214285714286, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI217416390, Length=113, Percent_Identity=34.5132743362832, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI53832021, Length=111, Percent_Identity=37.8378378378378, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI38327526, Length=111, Percent_Identity=37.8378378378378, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI6631081, Length=111, Percent_Identity=37.8378378378378, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI4502997, Length=113, Percent_Identity=33.6283185840708, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI188536053, Length=144, Percent_Identity=34.7222222222222, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI188536051, Length=144, Percent_Identity=34.7222222222222, Blast_Score=67, Evalue=4e-11, Organism=Caenorhabditis elegans, GI25143424, Length=294, Percent_Identity=29.9319727891156, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI71990283, Length=117, Percent_Identity=37.6068376068376, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI32563699, Length=117, Percent_Identity=37.6068376068376, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193203290, Length=294, Percent_Identity=23.469387755102, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI32563693, Length=116, Percent_Identity=33.6206896551724, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI193207630, Length=126, Percent_Identity=36.5079365079365, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71997496, Length=112, Percent_Identity=31.25, Blast_Score=73, Evalue=5e-13, Organism=Caenorhabditis elegans, GI25141274, Length=114, Percent_Identity=29.8245614035088, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71990310, Length=125, Percent_Identity=32.8, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71990304, Length=125, Percent_Identity=32.8, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25146607, Length=128, Percent_Identity=30.46875, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI221372165, Length=108, Percent_Identity=40.7407407407407, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI221372158, Length=108, Percent_Identity=40.7407407407407, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI221372169, Length=108, Percent_Identity=40.7407407407407, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI221372162, Length=108, Percent_Identity=40.7407407407407, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI28574958, Length=134, Percent_Identity=34.3283582089552, Blast_Score=76, Evalue=7e-14, Organism=Drosophila melanogaster, GI45553831, Length=113, Percent_Identity=35.3982300884956, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI221329604, Length=113, Percent_Identity=35.3982300884956, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI28571082, Length=113, Percent_Identity=35.3982300884956, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24638882, Length=113, Percent_Identity=35.3982300884956, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI221329602, Length=113, Percent_Identity=35.3982300884956, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI45553864, Length=113, Percent_Identity=35.3982300884956, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI221330951, Length=140, Percent_Identity=32.8571428571429, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI21356641, Length=111, Percent_Identity=36.9369369369369, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000834 [H]
Pfam domain/function: PF00246 Peptidase_M14 [H]
EC number: NA
Molecular weight: Translated: 62732; Mature: 62601
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEIDYTRYYRFAELVEALEGFAAEYPDLISLQSIGKSYEGRDLWLATVTNVATGGPREK CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEEEHHHCCCCCCCC PAFWVDANIHASEVTGAMAGLHLIDTLLKGYGNDAECTRLLDRTTFYILPRFNPDGAERA CCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEEEECCCCHHHC LTTPYVVRSSVRPYPYAERIDGLYQEDINGDGIILQMRLVDPNGDWRVSEHDPRVMVKRK CCCCHHHHCCCCCCCCHHHHCCHHHHCCCCCEEEEEEEEECCCCCEEECCCCCEEEEEEC PYEIGGTYYRILPEGLIQNYDGVNIKLSRAVEGLDINRNFPVDWRPEAEQYGAGPYPTSE CEECCCEEEEECCHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC PEIRAVVQFIVDHPEIHSGLTYHTYSGVLLRPYGDRADDQMNLHDLDVFKALGKHGTELT HHHHHHHHHHHCCCHHHCCCEEEEECCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCC GWPSVSVYHDFRYHPKDVITGVFDDWVYDHLGMFAWTVEFWDLVGSAGIKDRKFIEWFKE CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH HPEEDDLKIMQWVDEHGEGLCFYDWTAFEHPQLGPVEIGGWHPMYAFRNPPPAKLLETIA CCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHH PVTQFALAHAAIAPFTTISSFELEALGDNVYRLQAVVQNEGYLPSYGSQKGRERKATLPL HHHHHHHHHHHHCCCCCCCCEEEEHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCH EALLNLPEGSSLKLGQAKTTIGDLEGRSGRVSFFGFSNGSTTDRTKVEWVVHVPNPGVIE HHHHCCCCCCCEECCCCCCCHHCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCEEE LTIQGGRGGIARAKLEI EEEECCCCCEEEEEECC >Mature Secondary Structure PEIDYTRYYRFAELVEALEGFAAEYPDLISLQSIGKSYEGRDLWLATVTNVATGGPREK CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEEEHHHCCCCCCCC PAFWVDANIHASEVTGAMAGLHLIDTLLKGYGNDAECTRLLDRTTFYILPRFNPDGAERA CCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEEEECCCCHHHC LTTPYVVRSSVRPYPYAERIDGLYQEDINGDGIILQMRLVDPNGDWRVSEHDPRVMVKRK CCCCHHHHCCCCCCCCHHHHCCHHHHCCCCCEEEEEEEEECCCCCEEECCCCCEEEEEEC PYEIGGTYYRILPEGLIQNYDGVNIKLSRAVEGLDINRNFPVDWRPEAEQYGAGPYPTSE CEECCCEEEEECCHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC PEIRAVVQFIVDHPEIHSGLTYHTYSGVLLRPYGDRADDQMNLHDLDVFKALGKHGTELT HHHHHHHHHHHCCCHHHCCCEEEEECCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCC GWPSVSVYHDFRYHPKDVITGVFDDWVYDHLGMFAWTVEFWDLVGSAGIKDRKFIEWFKE CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH HPEEDDLKIMQWVDEHGEGLCFYDWTAFEHPQLGPVEIGGWHPMYAFRNPPPAKLLETIA CCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHH PVTQFALAHAAIAPFTTISSFELEALGDNVYRLQAVVQNEGYLPSYGSQKGRERKATLPL HHHHHHHHHHHHCCCCCCCCEEEEHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCH EALLNLPEGSSLKLGQAKTTIGDLEGRSGRVSFFGFSNGSTTDRTKVEWVVHVPNPGVIE HHHHCCCCCCCEECCCCCCCHHCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCEEE LTIQGGRGGIARAKLEI EEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA