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The map label for this gene is recA

Identifier: 159900707

GI number: 159900707

Start: 5350206

End: 5351282

Strand: Reverse

Name: recA

Synonym: Haur_4194

Alternate gene names: 159900707

Gene position: 5351282-5350206 (Counterclockwise)

Preceding gene: 159900709

Following gene: 159900706

Centisome position: 84.32

GC content: 50.32

Gene sequence:

>1077_bases
ATGGCAATTTCACCCGAAAAAGAAAAGGCTTTGGCCGCCGCCCTCAGTCAGATTGATCGCCAATTTGGTAAAGGCGCAAT
TATGCGTATGAGCGATCAACGCTTATCGATCGAAGCAATTCCAACTGGCTCAATTGCGCTCGATTTGGCGCTTGGGGTCG
GCGGGATTCCACGGGGTCGGGTGATTGAAATTTATGGTCCAGAAAGCTCAGGGAAAACCACCCTTACCCAACATATTGTG
GCCGAAACTCAAAAAATGGGTGGCGTTGCTGCTTTTATCGATGCTGAACATGCTTTTGATCCCGTCTATGCCGCCAATTG
TGGTGTCAACGTTGAAGACTTGTTGGTCTCACAACCTGACACTGGCGAGCAAGCGCTCGAAATTTGTGAAACTTTGGTGC
GCTCAGGTGCAATCGATGTGATTGTGGTTGACTCGGTAGCTGCGCTCGTACCACGCGCCGAAATTGAAGGCGACATGGGC
GATTCACACGTTGGTTTGCAAGCCCGTTTGATGTCGCAAGCCTTGCGCAAGCTCTCAGGTGCTGTCTCCAAATCACGCAC
AGCTTTGATTTTCATCAACCAATTGCGCATGAAAATCGGCGTGATGTTTGGTAATCCTGAAACTACCACCGGCGGCAATG
CGCTCAAATTCTATGCCTCGGTGCGCTTAGATATTCGCAAAGTTGAAAGTATCAAGCAAGGTCAAGATGTGACTGGCGCT
CGCGCACGGGTCAAAGTTGTTAAAAATAAAGTTGCACCACCTTTCCGTCAAGCTGAATTCGATATTATGTATAACGAAGG
CATCTCGCGCGAAGGCAATATTGTTGACGTTGGTGTGACCATGGAAATTCTGCGCAAGAGCGGGGCTTGGTTCTACCTTG
GCGATGATCGCTTGGGCCAAGGCCGCGAAAATGCCAAACAATTCCTTAAGGATAATCCAGCTTTAGCCGATGAAATCGAA
AAGATGATTCGGGCAGCTTCACCAGGCGCTCCTACCGCCAAAGTCATTGTTGGGGCGGCGGCTGCCAACGGTGCTGCGCC
TGCCGATGATGGCGATGGGATTTTCGACGACGAATAG

Upstream 100 bases:

>100_bases
TTGTACTTGACGAACAAGTGTGCTATACTGGCTTGCAGTGGCGACGTGCAAGTCTGCCGCACTTTTTCGTAAGCAAGAGT
ATCTACAAGGAGTCCGAGTA

Downstream 100 bases:

>100_bases
TCAGCGTTATCAATTGATTACAGAGGGCGTAGCATTGGTGTGCTGCGCCTTTTTGTTTGAGGAATTGCCATGCCAACTGG
AACCATTACCATGCTCGAAA

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MAISPEKEKALAAALSQIDRQFGKGAIMRMSDQRLSIEAIPTGSIALDLALGVGGIPRGRVIEIYGPESSGKTTLTQHIV
AETQKMGGVAAFIDAEHAFDPVYAANCGVNVEDLLVSQPDTGEQALEICETLVRSGAIDVIVVDSVAALVPRAEIEGDMG
DSHVGLQARLMSQALRKLSGAVSKSRTALIFINQLRMKIGVMFGNPETTTGGNALKFYASVRLDIRKVESIKQGQDVTGA
RARVKVVKNKVAPPFRQAEFDIMYNEGISREGNIVDVGVTMEILRKSGAWFYLGDDRLGQGRENAKQFLKDNPALADEIE
KMIRAASPGAPTAKVIVGAAAANGAAPADDGDGIFDDE

Sequences:

>Translated_358_residues
MAISPEKEKALAAALSQIDRQFGKGAIMRMSDQRLSIEAIPTGSIALDLALGVGGIPRGRVIEIYGPESSGKTTLTQHIV
AETQKMGGVAAFIDAEHAFDPVYAANCGVNVEDLLVSQPDTGEQALEICETLVRSGAIDVIVVDSVAALVPRAEIEGDMG
DSHVGLQARLMSQALRKLSGAVSKSRTALIFINQLRMKIGVMFGNPETTTGGNALKFYASVRLDIRKVESIKQGQDVTGA
RARVKVVKNKVAPPFRQAEFDIMYNEGISREGNIVDVGVTMEILRKSGAWFYLGDDRLGQGRENAKQFLKDNPALADEIE
KMIRAASPGAPTAKVIVGAAAANGAAPADDGDGIFDDE
>Mature_357_residues
AISPEKEKALAAALSQIDRQFGKGAIMRMSDQRLSIEAIPTGSIALDLALGVGGIPRGRVIEIYGPESSGKTTLTQHIVA
ETQKMGGVAAFIDAEHAFDPVYAANCGVNVEDLLVSQPDTGEQALEICETLVRSGAIDVIVVDSVAALVPRAEIEGDMGD
SHVGLQARLMSQALRKLSGAVSKSRTALIFINQLRMKIGVMFGNPETTTGGNALKFYASVRLDIRKVESIKQGQDVTGAR
ARVKVVKNKVAPPFRQAEFDIMYNEGISREGNIVDVGVTMEILRKSGAWFYLGDDRLGQGRENAKQFLKDNPALADEIEK
MIRAASPGAPTAKVIVGAAAANGAAPADDGDGIFDDE

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=325, Percent_Identity=64.3076923076923, Blast_Score=450, Evalue=1e-128,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_HERA2 (A9AXA6)

Other databases:

- EMBL:   CP000875
- RefSeq:   YP_001546954.1
- ProteinModelPortal:   A9AXA6
- SMR:   A9AXA6
- GeneID:   5736056
- GenomeReviews:   CP000875_GR
- KEGG:   hau:Haur_4194
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- ProtClustDB:   PRK09354
- BioCyc:   HAUR316274:HAUR_4194-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 38037; Mature: 37906

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISPEKEKALAAALSQIDRQFGKGAIMRMSDQRLSIEAIPTGSIALDLALGVGGIPRGR
CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCC
VIEIYGPESSGKTTLTQHIVAETQKMGGVAAFIDAEHAFDPVYAANCGVNVEDLLVSQPD
EEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECHHCCCCEEECCCCCCHHHHEECCCC
TGEQALEICETLVRSGAIDVIVVDSVAALVPRAEIEGDMGDSHVGLQARLMSQALRKLSG
CHHHHHHHHHHHHHCCCEEEEECCHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
AVSKSRTALIFINQLRMKIGVMFGNPETTTGGNALKFYASVRLDIRKVESIKQGQDVTGA
HHHCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCH
RARVKVVKNKVAPPFRQAEFDIMYNEGISREGNIVDVGVTMEILRKSGAWFYLGDDRLGQ
HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEECHHHHHHHHCCCEEEECCCCCCC
GRENAKQFLKDNPALADEIEKMIRAASPGAPTAKVIVGAAAANGAAPADDGDGIFDDE
CHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AISPEKEKALAAALSQIDRQFGKGAIMRMSDQRLSIEAIPTGSIALDLALGVGGIPRGR
CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCC
VIEIYGPESSGKTTLTQHIVAETQKMGGVAAFIDAEHAFDPVYAANCGVNVEDLLVSQPD
EEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECHHCCCCEEECCCCCCHHHHEECCCC
TGEQALEICETLVRSGAIDVIVVDSVAALVPRAEIEGDMGDSHVGLQARLMSQALRKLSG
CHHHHHHHHHHHHHCCCEEEEECCHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
AVSKSRTALIFINQLRMKIGVMFGNPETTTGGNALKFYASVRLDIRKVESIKQGQDVTGA
HHHCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCH
RARVKVVKNKVAPPFRQAEFDIMYNEGISREGNIVDVGVTMEILRKSGAWFYLGDDRLGQ
HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEECHHHHHHHHCCCEEEECCCCCCC
GRENAKQFLKDNPALADEIEKMIRAASPGAPTAKVIVGAAAANGAAPADDGDGIFDDE
CHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA