| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159900698
Identifier: 159900698
GI number: 159900698
Start: 5337775
End: 5338278
Strand: Direct
Name: 159900698
Synonym: Haur_4185
Alternate gene names: NA
Gene position: 5337775-5338278 (Clockwise)
Preceding gene: 159900697
Following gene: 159900699
Centisome position: 84.1
GC content: 44.05
Gene sequence:
>504_bases ATGAAATATATTTTTTTCATACTAAGCATATTACTATTATCTAGTTGCGAGGAGAATAATCACGTGAATAACCAAACCAA TCACGATGCTACGGTTGAGGCTGCTTTGCGTGATCTCAGTAGTCCCTTGAACCGGGCAGAGATTGAACGCTTCATGAACT TTGCACTTCCTGCTGAAGCGACCAATGTGCATACCCACGGCGAATCAGCCTTGGATACCATGGTGATTGCGCGGTTCGAT TTGCCTGCTGCTGCGCTCGATGCTTGGCTAACGACTCTACCGATTAGCGAATCACTCCAAACAACCCCTGACTCCTTTGC TTCGCTGCCAGCCCCTTACCGTGAGGCCAAAGCTTGGTGGCAACTTGATAGTTTAAATCTTCAACCTGAACAATATCGCT ATGTCTATCAATTTGTTAATGGTAAAAGCTATCAAATATTGGTGGTGCAATTATCGTCCGATGCCGAATTGCTAACAATT TACCTGCAAGTCTTTAATACCTAA
Upstream 100 bases:
>100_bases GATCTAACAGGGACATCGAGTGGTCAGAAGCATTTTTATACCTATGATTCATTTATTGGTCTAAAATAAATTTCTAATTG ACTTACGATAGGATACATCG
Downstream 100 bases:
>100_bases ATAAGTACACGTTATTAAGATCCAATTTGGTACTGATAATGACATAGAGCAGTTGCGATAGAACCAAGTTTAGCTTAATC ATTAACCCAAGCCCTGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MKYIFFILSILLLSSCEENNHVNNQTNHDATVEAALRDLSSPLNRAEIERFMNFALPAEATNVHTHGESALDTMVIARFD LPAAALDAWLTTLPISESLQTTPDSFASLPAPYREAKAWWQLDSLNLQPEQYRYVYQFVNGKSYQILVVQLSSDAELLTI YLQVFNT
Sequences:
>Translated_167_residues MKYIFFILSILLLSSCEENNHVNNQTNHDATVEAALRDLSSPLNRAEIERFMNFALPAEATNVHTHGESALDTMVIARFD LPAAALDAWLTTLPISESLQTTPDSFASLPAPYREAKAWWQLDSLNLQPEQYRYVYQFVNGKSYQILVVQLSSDAELLTI YLQVFNT >Mature_167_residues MKYIFFILSILLLSSCEENNHVNNQTNHDATVEAALRDLSSPLNRAEIERFMNFALPAEATNVHTHGESALDTMVIARFD LPAAALDAWLTTLPISESLQTTPDSFASLPAPYREAKAWWQLDSLNLQPEQYRYVYQFVNGKSYQILVVQLSSDAELLTI YLQVFNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18915; Mature: 18915
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYIFFILSILLLSSCEENNHVNNQTNHDATVEAALRDLSSPLNRAEIERFMNFALPAEA CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC TNVHTHGESALDTMVIARFDLPAAALDAWLTTLPISESLQTTPDSFASLPAPYREAKAWW CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHE QLDSLNLQPEQYRYVYQFVNGKSYQILVVQLSSDAELLTIYLQVFNT EECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCC >Mature Secondary Structure MKYIFFILSILLLSSCEENNHVNNQTNHDATVEAALRDLSSPLNRAEIERFMNFALPAEA CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC TNVHTHGESALDTMVIARFDLPAAALDAWLTTLPISESLQTTPDSFASLPAPYREAKAWW CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHE QLDSLNLQPEQYRYVYQFVNGKSYQILVVQLSSDAELLTIYLQVFNT EECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA