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The map label for this gene is ytfQ [H]

Identifier: 159900667

GI number: 159900667

Start: 5301731

End: 5302720

Strand: Reverse

Name: ytfQ [H]

Synonym: Haur_4154

Alternate gene names: 159900667

Gene position: 5302720-5301731 (Counterclockwise)

Preceding gene: 159900670

Following gene: 159900666

Centisome position: 83.55

GC content: 45.96

Gene sequence:

>990_bases
ATGTCACAGCATGCATTGATCAAACGTTTATTGATTTTGGTAACTCTGTTGAGTTTGGTAGCTTGTGGCTCAAGCCAAAC
CAACCAAACGGTAACTGCCGATAAACCCACTAAAACCTATGCCGATTTGGTGATTGGCTATTCGCAAATCGGCGCTGAAA
GCCGCTGGCGCACCGCTAATACCCTCTCAATCCAAGAAAGTGCCCAAGATTTGGGCGTTGACTTACGTTTTGCTGATGCC
CAACAGGAACAAATTAACCAAATTAATGCGATTCGTTCGTTCATCACTCAAAAAGTTGATCTGATTGGGGTTTCGCCAAT
TGTTGCCGATGGCTGGGATGAGGTGTTTGCTGAAGCCAAAGCCGCTGGAATTCCAATTATTGTGGTTGATCGCACGGCCA
ATGTGCCCGACGAATTAATTACCGCATTTATTGGCTCGGATTTTGTATTAGAAGGTGAACGCGCTTGCGAAGAAATGGCT
CAGTTGCTCAATCAAAAAGGCACGATTATTGAGCTAGAAGGCACGGTTGGCTCGGCTCCCGCCCGCGATCGTAAAACTGG
CTTTCATAATTGCTTGAAAAAATATCCCGAAATGCAGGTTTTGGTCTCAAAAAGCGGTGATTTTACCCGTGCTCAAGGCA
AAACTGTGTTGCAAGGCTTGATCAAGCAATATGGCACTGATTTTGATGCGATTTATGCTCACAACGATGATATGGCCTTG
GGTGCGATCGAATTGCTCAAAGAATTAGGCATCAAACCAGGGGTCGAGGTCAAAATTGTCTCGATCGATGCCGTTGAAGA
TGCCTTCAAAGCCATGATTGCTGGCGATTTGAATGTAACGGTTGAATGTAACCCGTTGCTTGGGCCACAATTTTTTGAAA
CTGCCCTGAAAATCGTCAACGGCGAGCCATTTGAACGCTGGGTTAAATCGAACGAAGGAATTTTTCGCCAAGCAACTGCC
GCCCAAGATCTGCCTAAACGGCGCTATTAG

Upstream 100 bases:

>100_bases
GCGATTTAGCCTATTGAGTCGGGCGAATTGGCTGTGTTAGGATCGCCAACGCAGCATCACATGAGAGTGAGTGTACATAG
CGTCCATCGGAGCGTACCCT

Downstream 100 bases:

>100_bases
TCGGTTGAGAATTGGCTGAGGTATGGTTCATGCAAGCTTTTGGTTTGTTCAAAACAATGGGGTTTCGTCAGCGTTTATTT
TTGGCGCTCAGCAGCCTGAG

Product: periplasmic binding protein/LacI transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSQHALIKRLLILVTLLSLVACGSSQTNQTVTADKPTKTYADLVIGYSQIGAESRWRTANTLSIQESAQDLGVDLRFADA
QQEQINQINAIRSFITQKVDLIGVSPIVADGWDEVFAEAKAAGIPIIVVDRTANVPDELITAFIGSDFVLEGERACEEMA
QLLNQKGTIIELEGTVGSAPARDRKTGFHNCLKKYPEMQVLVSKSGDFTRAQGKTVLQGLIKQYGTDFDAIYAHNDDMAL
GAIELLKELGIKPGVEVKIVSIDAVEDAFKAMIAGDLNVTVECNPLLGPQFFETALKIVNGEPFERWVKSNEGIFRQATA
AQDLPKRRY

Sequences:

>Translated_329_residues
MSQHALIKRLLILVTLLSLVACGSSQTNQTVTADKPTKTYADLVIGYSQIGAESRWRTANTLSIQESAQDLGVDLRFADA
QQEQINQINAIRSFITQKVDLIGVSPIVADGWDEVFAEAKAAGIPIIVVDRTANVPDELITAFIGSDFVLEGERACEEMA
QLLNQKGTIIELEGTVGSAPARDRKTGFHNCLKKYPEMQVLVSKSGDFTRAQGKTVLQGLIKQYGTDFDAIYAHNDDMAL
GAIELLKELGIKPGVEVKIVSIDAVEDAFKAMIAGDLNVTVECNPLLGPQFFETALKIVNGEPFERWVKSNEGIFRQATA
AQDLPKRRY
>Mature_328_residues
SQHALIKRLLILVTLLSLVACGSSQTNQTVTADKPTKTYADLVIGYSQIGAESRWRTANTLSIQESAQDLGVDLRFADAQ
QEQINQINAIRSFITQKVDLIGVSPIVADGWDEVFAEAKAAGIPIIVVDRTANVPDELITAFIGSDFVLEGERACEEMAQ
LLNQKGTIIELEGTVGSAPARDRKTGFHNCLKKYPEMQVLVSKSGDFTRAQGKTVLQGLIKQYGTDFDAIYAHNDDMALG
AIELLKELGIKPGVEVKIVSIDAVEDAFKAMIAGDLNVTVECNPLLGPQFFETALKIVNGEPFERWVKSNEGIFRQATAA
QDLPKRRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790674, Length=291, Percent_Identity=40.5498281786942, Blast_Score=223, Evalue=1e-59,
Organism=Escherichia coli, GI1790192, Length=298, Percent_Identity=29.5302013422819, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 35959; Mature: 35827

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQHALIKRLLILVTLLSLVACGSSQTNQTVTADKPTKTYADLVIGYSQIGAESRWRTAN
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
TLSIQESAQDLGVDLRFADAQQEQINQINAIRSFITQKVDLIGVSPIVADGWDEVFAEAK
EEEHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHEECCCHHHCCHHHHHHHHH
AAGIPIIVVDRTANVPDELITAFIGSDFVLEGERACEEMAQLLNQKGTIIELEGTVGSAP
HCCCCEEEECCCCCCCHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCCEEEECCCCCCCC
ARDRKTGFHNCLKKYPEMQVLVSKSGDFTRAQGKTVLQGLIKQYGTDFDAIYAHNDDMAL
CCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHH
GAIELLKELGIKPGVEVKIVSIDAVEDAFKAMIAGDLNVTVECNPLLGPQFFETALKIVN
HHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHC
GEPFERWVKSNEGIFRQATAAQDLPKRRY
CCHHHHHHHCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SQHALIKRLLILVTLLSLVACGSSQTNQTVTADKPTKTYADLVIGYSQIGAESRWRTAN
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
TLSIQESAQDLGVDLRFADAQQEQINQINAIRSFITQKVDLIGVSPIVADGWDEVFAEAK
EEEHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHEECCCHHHCCHHHHHHHHH
AAGIPIIVVDRTANVPDELITAFIGSDFVLEGERACEEMAQLLNQKGTIIELEGTVGSAP
HCCCCEEEECCCCCCCHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCCEEEECCCCCCCC
ARDRKTGFHNCLKKYPEMQVLVSKSGDFTRAQGKTVLQGLIKQYGTDFDAIYAHNDDMAL
CCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHH
GAIELLKELGIKPGVEVKIVSIDAVEDAFKAMIAGDLNVTVECNPLLGPQFFETALKIVN
HHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHC
GEPFERWVKSNEGIFRQATAAQDLPKRRY
CCHHHHHHHCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 9298646 [H]