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The map label for this gene is ymfB [C]

Identifier: 159900655

GI number: 159900655

Start: 5290252

End: 5290773

Strand: Reverse

Name: ymfB [C]

Synonym: Haur_4142

Alternate gene names: 159900655

Gene position: 5290773-5290252 (Counterclockwise)

Preceding gene: 159900656

Following gene: 159900654

Centisome position: 83.36

GC content: 52.3

Gene sequence:

>522_bases
ATGCCGAGTCATTCGGTTTACGACAATATTCGAACCCGGGTGATTGTGCTGCGTGAGCAAGAACTCTTGATTATGGCCAC
CGAAGATCAGCCAGAATTGGTTTGGCGCTTGCCTGGTGGTGGTTTAGAACAGGGCGAATCGTTGGCCGATTGTGCCGCCC
GTGAAGTTTGGGAAGAATGCGGCATTCGGGTGCAAGTTGGCAAAGTTGCTTTCTTGCGCGAGTGGGTTATTCCAACCTAT
GCCATCATCGACCCAAATGATCGTGAGCCAAACTATGGCTTAGAAGTGTTTCTGTATGCTACGCCGTTAGATCCACAGGC
TACACTTCGTGCCGAGGCTGCCGATAAACCAATGCCCGAATGGCGCAGCTTGGTTGAAATAGCCAGCATGCCATTTTGGC
CCAAAGAGCTGAAATCGTTGGCAACGTTTTTGGCCGAAGGCCAACGCCCAAGCGCCGCCCATTCATTCGTTAGCAGCTTT
GAATCTGGTTGGGCAATCCCACCAGCAATCGACTGGGCCTGA

Upstream 100 bases:

>100_bases
AGGTCGAATCGGCCTTGAGCGGCTTGCAAGCTGGCGTAAAAATCGTGCGCATCACGAATATCGATCAGCTTGATGCTGGC
ACAATTATCGAGGCCGCCTA

Downstream 100 bases:

>100_bases
TACCCTCACCCCCTGACCCCCTCTCCCGCCCAGCAGGCGAGGGGAACCGCTCTAAGAGTCTCCCCCTCGCCCGCCGCAGT
GGGAGAGGGGTTGGGGGTGA

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MPSHSVYDNIRTRVIVLREQELLIMATEDQPELVWRLPGGGLEQGESLADCAAREVWEECGIRVQVGKVAFLREWVIPTY
AIIDPNDREPNYGLEVFLYATPLDPQATLRAEAADKPMPEWRSLVEIASMPFWPKELKSLATFLAEGQRPSAAHSFVSSF
ESGWAIPPAIDWA

Sequences:

>Translated_173_residues
MPSHSVYDNIRTRVIVLREQELLIMATEDQPELVWRLPGGGLEQGESLADCAAREVWEECGIRVQVGKVAFLREWVIPTY
AIIDPNDREPNYGLEVFLYATPLDPQATLRAEAADKPMPEWRSLVEIASMPFWPKELKSLATFLAEGQRPSAAHSFVSSF
ESGWAIPPAIDWA
>Mature_172_residues
PSHSVYDNIRTRVIVLREQELLIMATEDQPELVWRLPGGGLEQGESLADCAAREVWEECGIRVQVGKVAFLREWVIPTYA
IIDPNDREPNYGLEVFLYATPLDPQATLRAEAADKPMPEWRSLVEIASMPFWPKELKSLATFLAEGQRPSAAHSFVSSFE
SGWAIPPAIDWA

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.-.- [C]

Molecular weight: Translated: 19466; Mature: 19335

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSHSVYDNIRTRVIVLREQELLIMATEDQPELVWRLPGGGLEQGESLADCAAREVWEEC
CCCCHHHHCCCEEEEEEECCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHC
GIRVQVGKVAFLREWVIPTYAIIDPNDREPNYGLEVFLYATPLDPQATLRAEAADKPMPE
CCEEEECHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEECCCCCCHHHECCCCCCCCHH
WRSLVEIASMPFWPKELKSLATFLAEGQRPSAAHSFVSSFESGWAIPPAIDWA
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PSHSVYDNIRTRVIVLREQELLIMATEDQPELVWRLPGGGLEQGESLADCAAREVWEEC
CCCHHHHCCCEEEEEEECCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHC
GIRVQVGKVAFLREWVIPTYAIIDPNDREPNYGLEVFLYATPLDPQATLRAEAADKPMPE
CCEEEECHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEECCCCCCHHHECCCCCCCCHH
WRSLVEIASMPFWPKELKSLATFLAEGQRPSAAHSFVSSFESGWAIPPAIDWA
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA