| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900612
Identifier: 159900612
GI number: 159900612
Start: 5231396
End: 5232061
Strand: Direct
Name: 159900612
Synonym: Haur_4099
Alternate gene names: NA
Gene position: 5231396-5232061 (Clockwise)
Preceding gene: 159900611
Following gene: 159900616
Centisome position: 82.43
GC content: 48.5
Gene sequence:
>666_bases ATGGAACGAGCACGGATTTTACGCTGGCGTTTAGAGCAGCAGATCGAGCGCATTCGCCAAACTGAGAGCGATCTACATAG TCGGGCCACTGCGCGGATTGTGCGCCCATTAATCGAGCTACACTTACCTCACTTTATGCAAGCCTTGGGAGCCGATCACC TTGAGCATTGCACCGAAATTCCCCATGCCAAAATTCAGGCTGATCGCTATTCAGTCATTGTCCCAATCATTGTACGCGAT CATCTCACCACCAAAGTTTTTGCGCTAAAACCATTCATTGGCACATTTATGCTGGCGATTAACGCCAATACGCTTGAATT TCGTTTGTTTTGTAGAGCGGTGCGCTATCGCAACCGCTTTGTTGGCGATGCCAAAACTGGCGAGTGGTTGGCTCCAGGCG AATATGTTGAAGAACATCGCTTAGCTTCAGTCGAAGTCGATGGATCGCAGCCAGAGCTAGCAGTTAAACAACTTTTTGAT CAAGCGCTGCCGCTGATTCCCCAGATTTTACAATGGACGCAACGTGCTGCCAAAGCCCAAAAACAGTATCGCTGGTATCA AGTTGGCCGTGGTTTGGCCTTCAATCTGGCTGTGCTGGGCTATATTGTGGCATTATTGCTGATTTTATTGGGCAGTTTGG TGACTATGGCGAGTACATTTCCTTGA
Upstream 100 bases:
>100_bases TGAGGCCGACCAAATTGTCGCAGATCGAGAGATCGAGCAGCGTTTAGCTGACCGTAAACGAGCTATCAGCTAGCAAACTT CCATCAACTAGGTGGTTGCT
Downstream 100 bases:
>100_bases TTGACCAGGGATCAGGGATTGGTTGTTGGGGACAGGTACAAGCAAAAGGCCAAGAAAATCATTATGTACAGGCTAGTCCC GCAGCGGACAGAGGACTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MERARILRWRLEQQIERIRQTESDLHSRATARIVRPLIELHLPHFMQALGADHLEHCTEIPHAKIQADRYSVIVPIIVRD HLTTKVFALKPFIGTFMLAINANTLEFRLFCRAVRYRNRFVGDAKTGEWLAPGEYVEEHRLASVEVDGSQPELAVKQLFD QALPLIPQILQWTQRAAKAQKQYRWYQVGRGLAFNLAVLGYIVALLLILLGSLVTMASTFP
Sequences:
>Translated_221_residues MERARILRWRLEQQIERIRQTESDLHSRATARIVRPLIELHLPHFMQALGADHLEHCTEIPHAKIQADRYSVIVPIIVRD HLTTKVFALKPFIGTFMLAINANTLEFRLFCRAVRYRNRFVGDAKTGEWLAPGEYVEEHRLASVEVDGSQPELAVKQLFD QALPLIPQILQWTQRAAKAQKQYRWYQVGRGLAFNLAVLGYIVALLLILLGSLVTMASTFP >Mature_221_residues MERARILRWRLEQQIERIRQTESDLHSRATARIVRPLIELHLPHFMQALGADHLEHCTEIPHAKIQADRYSVIVPIIVRD HLTTKVFALKPFIGTFMLAINANTLEFRLFCRAVRYRNRFVGDAKTGEWLAPGEYVEEHRLASVEVDGSQPELAVKQLFD QALPLIPQILQWTQRAAKAQKQYRWYQVGRGLAFNLAVLGYIVALLLILLGSLVTMASTFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25404; Mature: 25404
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERARILRWRLEQQIERIRQTESDLHSRATARIVRPLIELHLPHFMQALGADHLEHCTEI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC PHAKIQADRYSVIVPIIVRDHLTTKVFALKPFIGTFMLAINANTLEFRLFCRAVRYRNRF CCCCEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VGDAKTGEWLAPGEYVEEHRLASVEVDGSQPELAVKQLFDQALPLIPQILQWTQRAAKAQ CCCCCCCCCCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQYRWYQVGRGLAFNLAVLGYIVALLLILLGSLVTMASTFP HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MERARILRWRLEQQIERIRQTESDLHSRATARIVRPLIELHLPHFMQALGADHLEHCTEI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC PHAKIQADRYSVIVPIIVRDHLTTKVFALKPFIGTFMLAINANTLEFRLFCRAVRYRNRF CCCCEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VGDAKTGEWLAPGEYVEEHRLASVEVDGSQPELAVKQLFDQALPLIPQILQWTQRAAKAQ CCCCCCCCCCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQYRWYQVGRGLAFNLAVLGYIVALLLILLGSLVTMASTFP HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA