Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900593

Identifier: 159900593

GI number: 159900593

Start: 5212417

End: 5213433

Strand: Reverse

Name: 159900593

Synonym: Haur_4080

Alternate gene names: NA

Gene position: 5213433-5212417 (Counterclockwise)

Preceding gene: 159900594

Following gene: 159900592

Centisome position: 82.15

GC content: 54.28

Gene sequence:

>1017_bases
ATGACAGACGATCCGTTAACCTCAAACCAAGCAGAATTAGCAGAGGCCGAGCCACGTCGGAGTAGCTCGGCCCCACCTCA
ATTACGTGCGGCGATCAGTCGGGCATTATCACGGCGCAAAGCTGAATTGCAAAGCCAAAGCGTTGCTGAGGAAACGGTAG
CTGTTGAAATTGCGCCAACTATCGTTGCCGAGCCAGAGCCGCCGATGCCGCTACGGCAAGAGCGTTATCGGGTGGCGGCA
AGTCGCGCATTAAGTCGTTTGCGGCCAAGCAGTGAAACTCCACAGATTGCTAATTCAACCAGCAACCGAGGCCGTGATCG
CACTCGTACTCGGTTGCGCCCGCCAACCTTGCCTAACCAACCTTTGCCCAAACTGCCAACCGATCAACCGGTGCGGCGCG
AATTGCCAGCCGCAGTTGTCGCAGCCTTGCAGCCCGATAGCCTGCCCGCACCAGAAATTCAGCGCCCGCCATTGTGGGTG
GCCTTCGTGGCAGGCTTAGGTTGGACAGCGATGTTGCTATGGGTCTTTTTTGGCGGGCTTTCGCCGCAATCGGGCTTTGG
AGTGCGTAGTTTGTTTGGCCTGGCAACTGTGGCGTTGGGCTTAACCACGTGGCTGCCAATGCAATGGGCCTTGCGTTTGC
CAGCATTAACGTGGCGTGGCACGGTTGGTTGGGCCATCATTTTCTGGATCTTGGCTTTTGTGCCCGCACCAACTACCACG
ATTGCCGCAGGATTGCCCGATTTGCCGATCTACTTGATCTTTCTGAGTGGGGTATTTTTGGCTAGCAATGCCATGGTTTT
GCCAATCGTCTATGTCTGGGGCATTCGGCGTTATCATAATCGGGCGCAGCGCTTTGATGTGCGGCGTTCGCATCGCCAAG
CAGCCGAGGCTGGAATTTTTTGCAGTTTGTGTGTGCTTTTGGCAGCAATGAACATTTTCGAGCCAGTTACAGTGTTATTG
TTAATCGCCATTTTGGTATTGAGCGAAATGGTGATTTTATCGTTACAGGCCAAATAG

Upstream 100 bases:

>100_bases
AACCGTCTTGCCGCGTTTAGTGCCAGTTGCCGAGGCGATGTTGGCCTTGGTGCTGGTCGATTGTGTCTTGCAACAACGTG
CCGCCCGATTGTAGGCCTGA

Downstream 100 bases:

>100_bases
TCGGCTTGCATGGACGGATGGGAGTTGTTCTATGGCATATACCGTTGCAATTCTTGGAACTGGGCTGATTGGCGCGTCGC
TGGGCTTAGCGTTGGGCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MTDDPLTSNQAELAEAEPRRSSSAPPQLRAAISRALSRRKAELQSQSVAEETVAVEIAPTIVAEPEPPMPLRQERYRVAA
SRALSRLRPSSETPQIANSTSNRGRDRTRTRLRPPTLPNQPLPKLPTDQPVRRELPAAVVAALQPDSLPAPEIQRPPLWV
AFVAGLGWTAMLLWVFFGGLSPQSGFGVRSLFGLATVALGLTTWLPMQWALRLPALTWRGTVGWAIIFWILAFVPAPTTT
IAAGLPDLPIYLIFLSGVFLASNAMVLPIVYVWGIRRYHNRAQRFDVRRSHRQAAEAGIFCSLCVLLAAMNIFEPVTVLL
LIAILVLSEMVILSLQAK

Sequences:

>Translated_338_residues
MTDDPLTSNQAELAEAEPRRSSSAPPQLRAAISRALSRRKAELQSQSVAEETVAVEIAPTIVAEPEPPMPLRQERYRVAA
SRALSRLRPSSETPQIANSTSNRGRDRTRTRLRPPTLPNQPLPKLPTDQPVRRELPAAVVAALQPDSLPAPEIQRPPLWV
AFVAGLGWTAMLLWVFFGGLSPQSGFGVRSLFGLATVALGLTTWLPMQWALRLPALTWRGTVGWAIIFWILAFVPAPTTT
IAAGLPDLPIYLIFLSGVFLASNAMVLPIVYVWGIRRYHNRAQRFDVRRSHRQAAEAGIFCSLCVLLAAMNIFEPVTVLL
LIAILVLSEMVILSLQAK
>Mature_337_residues
TDDPLTSNQAELAEAEPRRSSSAPPQLRAAISRALSRRKAELQSQSVAEETVAVEIAPTIVAEPEPPMPLRQERYRVAAS
RALSRLRPSSETPQIANSTSNRGRDRTRTRLRPPTLPNQPLPKLPTDQPVRRELPAAVVAALQPDSLPAPEIQRPPLWVA
FVAGLGWTAMLLWVFFGGLSPQSGFGVRSLFGLATVALGLTTWLPMQWALRLPALTWRGTVGWAIIFWILAFVPAPTTTI
AAGLPDLPIYLIFLSGVFLASNAMVLPIVYVWGIRRYHNRAQRFDVRRSHRQAAEAGIFCSLCVLLAAMNIFEPVTVLLL
IAILVLSEMVILSLQAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37167; Mature: 37036

Theoretical pI: Translated: 11.32; Mature: 11.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDDPLTSNQAELAEAEPRRSSSAPPQLRAAISRALSRRKAELQSQSVAEETVAVEIAPT
CCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC
IVAEPEPPMPLRQERYRVAASRALSRLRPSSETPQIANSTSNRGRDRTRTRLRPPTLPNQ
EEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHCCCCCCCCCC
PLPKLPTDQPVRRELPAAVVAALQPDSLPAPEIQRPPLWVAFVAGLGWTAMLLWVFFGGL
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SPQSGFGVRSLFGLATVALGLTTWLPMQWALRLPALTWRGTVGWAIIFWILAFVPAPTTT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHCCCHHH
IAAGLPDLPIYLIFLSGVFLASNAMVLPIVYVWGIRRYHNRAQRFDVRRSHRQAAEAGIF
HHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CSLCVLLAAMNIFEPVTVLLLIAILVLSEMVILSLQAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDDPLTSNQAELAEAEPRRSSSAPPQLRAAISRALSRRKAELQSQSVAEETVAVEIAPT
CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC
IVAEPEPPMPLRQERYRVAASRALSRLRPSSETPQIANSTSNRGRDRTRTRLRPPTLPNQ
EEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHCCCCCCCCCC
PLPKLPTDQPVRRELPAAVVAALQPDSLPAPEIQRPPLWVAFVAGLGWTAMLLWVFFGGL
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SPQSGFGVRSLFGLATVALGLTTWLPMQWALRLPALTWRGTVGWAIIFWILAFVPAPTTT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHCCCHHH
IAAGLPDLPIYLIFLSGVFLASNAMVLPIVYVWGIRRYHNRAQRFDVRRSHRQAAEAGIF
HHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CSLCVLLAAMNIFEPVTVLLLIAILVLSEMVILSLQAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA