| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900557
Identifier: 159900557
GI number: 159900557
Start: 5163314
End: 5163832
Strand: Direct
Name: 159900557
Synonym: Haur_4044
Alternate gene names: NA
Gene position: 5163314-5163832 (Clockwise)
Preceding gene: 159900556
Following gene: 159900558
Centisome position: 81.36
GC content: 49.9
Gene sequence:
>519_bases ATGATTAAGTGTCCAGCGTGTGAAACCGAAAATTTACCAGGCACCTTCTTTTGCGTTGATTGTGGCTCGTCGTTTTTGCC CTCGCGCATTCGTGAAACGACTGCCTCACTTGGCGCAGCAACCATGGCGGGTGGCTCTGGTAATTTAGTCATTCCACCGC CTGCGCCACCGCGCGATACGGCAATTCCGGTGTTGCGGGTGGTGATTCTGAATAGCGGACGTAAGCTTGGCTTCAATACC AACCAGCCAATTGTGATTGGTCGCCAAGATAGCAAGGGCAGTTTCTACCCCGATATTGATCTTTCAACCGATGGTGGTTT AGAGGCTGGCGTTTCACGTCGTCATGCAATTATTCGCATTCAAAGCGGCAATGTTTGCACACTCGAAGATTTAGGTAGCT CGAATGGCACCTTTATCAACCGTGAAAAGCTGGCTGCCAATAGCCCTAAAGCCTTGCGTCATGGCGATGAAGTGCGTTTG GGCAATATTCTGTTACGCATTGAGTTGACTAGCCAATAG
Upstream 100 bases:
>100_bases GCGTAGCGGCACAACCAGCGATGAAGGTCGCAAACGGATTAAATACGGCACCCGTGGCTTGGTCGCTCGCGAACGGGGCG GAGAGCAATAGGAAGTTGTT
Downstream 100 bases:
>100_bases CTGTTATAGCTGATAAAAGGAGTTTTTCTATGGGTGCTCGAATTGTTATTTTGCACTTGAGCGGCGAAGATCCAATTGTC GCTGAGATGGAAGAAGATCC
Product: FHA domain-containing protein
Products: NA
Alternate protein names: Forkhead-Associated Protein
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MIKCPACETENLPGTFFCVDCGSSFLPSRIRETTASLGAATMAGGSGNLVIPPPAPPRDTAIPVLRVVILNSGRKLGFNT NQPIVIGRQDSKGSFYPDIDLSTDGGLEAGVSRRHAIIRIQSGNVCTLEDLGSSNGTFINREKLAANSPKALRHGDEVRL GNILLRIELTSQ
Sequences:
>Translated_172_residues MIKCPACETENLPGTFFCVDCGSSFLPSRIRETTASLGAATMAGGSGNLVIPPPAPPRDTAIPVLRVVILNSGRKLGFNT NQPIVIGRQDSKGSFYPDIDLSTDGGLEAGVSRRHAIIRIQSGNVCTLEDLGSSNGTFINREKLAANSPKALRHGDEVRL GNILLRIELTSQ >Mature_172_residues MIKCPACETENLPGTFFCVDCGSSFLPSRIRETTASLGAATMAGGSGNLVIPPPAPPRDTAIPVLRVVILNSGRKLGFNT NQPIVIGRQDSKGSFYPDIDLSTDGGLEAGVSRRHAIIRIQSGNVCTLEDLGSSNGTFINREKLAANSPKALRHGDEVRL GNILLRIELTSQ
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18259; Mature: 18259
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKCPACETENLPGTFFCVDCGSSFLPSRIRETTASLGAATMAGGSGNLVIPPPAPPRDT CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCEEECCCCCCCCC AIPVLRVVILNSGRKLGFNTNQPIVIGRQDSKGSFYPDIDLSTDGGLEAGVSRRHAIIRI HHHEEEEEEECCCCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE QSGNVCTLEDLGSSNGTFINREKLAANSPKALRHGDEVRLGNILLRIELTSQ CCCCEEEHHCCCCCCCCEEEHHHHCCCCCHHHHCCCCEEECEEEEEEEEECC >Mature Secondary Structure MIKCPACETENLPGTFFCVDCGSSFLPSRIRETTASLGAATMAGGSGNLVIPPPAPPRDT CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCEEECCCCCCCCC AIPVLRVVILNSGRKLGFNTNQPIVIGRQDSKGSFYPDIDLSTDGGLEAGVSRRHAIIRI HHHEEEEEEECCCCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE QSGNVCTLEDLGSSNGTFINREKLAANSPKALRHGDEVRLGNILLRIELTSQ CCCCEEEHHCCCCCCCCEEEHHHHCCCCCHHHHCCCCEEECEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA