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The map label for this gene is troD [H]

Identifier: 159900540

GI number: 159900540

Start: 5141869

End: 5142984

Strand: Reverse

Name: troD [H]

Synonym: Haur_4027

Alternate gene names: 159900540

Gene position: 5142984-5141869 (Counterclockwise)

Preceding gene: 159900541

Following gene: 159900532

Centisome position: 81.04

GC content: 52.15

Gene sequence:

>1116_bases
ATGAGTAGCACGTTTGCAATTATTCTGACTGGAATTTTGGTGGCGGCTGCCTGTGCCTCGCTTGGCTGTTTTCTCATCTT
GCGGCGCATGGCGATGCTGGCCGACGCGATTAGCCATGCGATTTTGCCAGGCTTGGTAGCGGGCTATTTCATTGCGCAAG
GCCCAAGTTTATTGGCAGGCTTTTTTGGGGCAGCCTTGGCAGGCCTGATTACCGTAGGCTTGGTTGAGTTGCTCAAAAAT
ACCCAGCGCGTTGGCGGCGAATCGGCAATTGGGATTGTGTTTCCAGCTATGTTTGCCTTGGGAACCTTCCTCGTCTCGAA
ATATTATGCCGATGTTCACCTTGATGCCGATGCGGTGCTCTATGGCAACATCGAGTTTGTCGGCTTCGACCATTGGTATC
TTGGCGAAACCGATTTAGGGCCGCAATCGCTGTGGATCATGGGCTGCTTATGTTTGATCAATTTGATTTTTATTAGTGTG
TTTTACAAAGAACTCAAATTGGCTACTTTTGATGCTGGCTTAGCAGCAACCCTTGGCTTTTCGCCAATTCTCATTCACTA
TGGCCTGATGGCGGTGGTTTCAATTACCACGGTTGGTGCATTTACGGCGGTTGGCGCGATTTTGGTGGTGGCCTTGATGA
TTGTGCCTGCGGCCACGGCCTATTTGCTGACCGACCGCCTGCCGTGGATGATTGGCTTGGCGATTGCGGCTGGAGCGATT
GCCGCAGTTGCTGGCTTTGGCTTAGCCTTTATGCTGAATGGCTCGGTTGCAGGCGCAATTGCCACAGTTACCGGAGTTGA
ATTTGGCTTGGCCTTGTTGTTCAGCTCCAAACAAGGCTTGGTTGCCCGGGCACAGCGCTTGGCTCGCCAACGAATTCAAT
TTGCTGCCGATACGCTCTTGGTGCACCTGTTGCAACACGAAGGTAGCCCCGACGCTGCCCATGAAAGCACGATTGACCAT
TTGCAAAGCGAATTGCAATGGAATAACAAGTTTGCGCAACGAGTGCTTGATCTGGCTCAGCGGCGAAGTTTGGTGCGCTG
CCAAGGCCAACAACTTGAACTGACGACCAGTGGGCGTGAACGGAGTCAGCAAGTCTTGCAATTAGGTCGTGGCTAG

Upstream 100 bases:

>100_bases
CCAGCCCGTGGCTTGGTTTGGGCGAAAATCCGTCAAAACCATTCGCTGAACAACGAGCCACGTAACCGCGAAATTCAGCC
AGCCAAAGGAGAATAAGCCA

Downstream 100 bases:

>100_bases
CACCGCCCTTCCGCTAGCCACGGTTCCCACCTAGCAGAGCCTACTCAATGGCGAGTAGGCTTTTGTTTTGTTGCTTCCTA
CTCATTGATTGTTAGTTGGA

Product: ABC-3 protein

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MSSTFAIILTGILVAAACASLGCFLILRRMAMLADAISHAILPGLVAGYFIAQGPSLLAGFFGAALAGLITVGLVELLKN
TQRVGGESAIGIVFPAMFALGTFLVSKYYADVHLDADAVLYGNIEFVGFDHWYLGETDLGPQSLWIMGCLCLINLIFISV
FYKELKLATFDAGLAATLGFSPILIHYGLMAVVSITTVGAFTAVGAILVVALMIVPAATAYLLTDRLPWMIGLAIAAGAI
AAVAGFGLAFMLNGSVAGAIATVTGVEFGLALLFSSKQGLVARAQRLARQRIQFAADTLLVHLLQHEGSPDAAHESTIDH
LQSELQWNNKFAQRVLDLAQRRSLVRCQGQQLELTTSGRERSQQVLQLGRG

Sequences:

>Translated_371_residues
MSSTFAIILTGILVAAACASLGCFLILRRMAMLADAISHAILPGLVAGYFIAQGPSLLAGFFGAALAGLITVGLVELLKN
TQRVGGESAIGIVFPAMFALGTFLVSKYYADVHLDADAVLYGNIEFVGFDHWYLGETDLGPQSLWIMGCLCLINLIFISV
FYKELKLATFDAGLAATLGFSPILIHYGLMAVVSITTVGAFTAVGAILVVALMIVPAATAYLLTDRLPWMIGLAIAAGAI
AAVAGFGLAFMLNGSVAGAIATVTGVEFGLALLFSSKQGLVARAQRLARQRIQFAADTLLVHLLQHEGSPDAAHESTIDH
LQSELQWNNKFAQRVLDLAQRRSLVRCQGQQLELTTSGRERSQQVLQLGRG
>Mature_370_residues
SSTFAIILTGILVAAACASLGCFLILRRMAMLADAISHAILPGLVAGYFIAQGPSLLAGFFGAALAGLITVGLVELLKNT
QRVGGESAIGIVFPAMFALGTFLVSKYYADVHLDADAVLYGNIEFVGFDHWYLGETDLGPQSLWIMGCLCLINLIFISVF
YKELKLATFDAGLAATLGFSPILIHYGLMAVVSITTVGAFTAVGAILVVALMIVPAATAYLLTDRLPWMIGLAIAAGAIA
AVAGFGLAFMLNGSVAGAIATVTGVEFGLALLFSSKQGLVARAQRLARQRIQFAADTLLVHLLQHEGSPDAAHESTIDHL
QSELQWNNKFAQRVLDLAQRRSLVRCQGQQLELTTSGRERSQQVLQLGRG

Specific function: Part of an ATP-driven transport system troABCD for zinc [H]

COG id: COG1108

COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-3 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001626 [H]

Pfam domain/function: PF00950 ABC-3 [H]

EC number: NA

Molecular weight: Translated: 39315; Mature: 39184

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTFAIILTGILVAAACASLGCFLILRRMAMLADAISHAILPGLVAGYFIAQGPSLLAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FFGAALAGLITVGLVELLKNTQRVGGESAIGIVFPAMFALGTFLVSKYYADVHLDADAVL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEE
YGNIEFVGFDHWYLGETDLGPQSLWIMGCLCLINLIFISVFYKELKLATFDAGLAATLGF
EECEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
SPILIHYGLMAVVSITTVGAFTAVGAILVVALMIVPAATAYLLTDRLPWMIGLAIAAGAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AAVAGFGLAFMLNGSVAGAIATVTGVEFGLALLFSSKQGLVARAQRLARQRIQFAADTLL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VHLLQHEGSPDAAHESTIDHLQSELQWNNKFAQRVLDLAQRRSLVRCQGQQLELTTSGRE
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHH
RSQQVLQLGRG
HHHHHHHHCCC
>Mature Secondary Structure 
SSTFAIILTGILVAAACASLGCFLILRRMAMLADAISHAILPGLVAGYFIAQGPSLLAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FFGAALAGLITVGLVELLKNTQRVGGESAIGIVFPAMFALGTFLVSKYYADVHLDADAVL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEE
YGNIEFVGFDHWYLGETDLGPQSLWIMGCLCLINLIFISVFYKELKLATFDAGLAATLGF
EECEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
SPILIHYGLMAVVSITTVGAFTAVGAILVVALMIVPAATAYLLTDRLPWMIGLAIAAGAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AAVAGFGLAFMLNGSVAGAIATVTGVEFGLALLFSSKQGLVARAQRLARQRIQFAADTLL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VHLLQHEGSPDAAHESTIDHLQSELQWNNKFAQRVLDLAQRRSLVRCQGQQLELTTSGRE
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHH
RSQQVLQLGRG
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9332349; 9665876 [H]