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The map label for this gene is 159900521

Identifier: 159900521

GI number: 159900521

Start: 5114776

End: 5115468

Strand: Reverse

Name: 159900521

Synonym: Haur_4008

Alternate gene names: NA

Gene position: 5115468-5114776 (Counterclockwise)

Preceding gene: 159900522

Following gene: 159900520

Centisome position: 80.6

GC content: 54.4

Gene sequence:

>693_bases
ATGGAATTACGGCGATATGTTGCGATTATTCAACGCTCGTGGTGGCTGGTGCTCGGTGTGCCGCTGCTGGTGCTGTTGGT
GTCACTGATCAGCTTTCAGCCTGATCCACAGCGCTATCGGGTCAACGCCAAATTTGCCATCACCCACGCTCCAGTCGGCG
GCAACGAGGTCTTGCCCGATATGAATATTTACAATTCATGGCAAAGCACTCAATTTATCGTTGATGATTTGCCGAGTGTC
GTGCGCACCGAAGCCTTTGCCCAAGCCATTAGCACCTGGATCGCCAGCAATCGCAATATTCAGCTTGATGCTGGCGCAGT
CAAAGGTATGATCACCGCAGTTGAGCAGGAGCATCGCATCGCAACCATTATTGTCGATGCGGATACTGCTGATCAGGCTA
CGGCGATTGCCGCTGGCAGCATTGCGGTGCTCGATGAACAAGGCTTGCAATGGTGGGATCGCGCTCAATGGGGCACGCTG
GCGGTCGAAACGCTCGAACTACCAACCACTGCTAGTGCATTAAGTCGTTGGCCGCAGCCAATTACTCGTTTGGCTTTGCG
CTTGGTGTTGGCGTTGGTGGCGGGGCTTGGCTTGGCCTTCTTGCGCCACTACCTCGATCGCACCGTGCGCGAACAGAGCG
ATTTGGCTCAGCTGAATGTACCAGTGCTCGTAGCTATTCCAAAGGAGTCGTAA

Upstream 100 bases:

>100_bases
CAATTCGTGGCTAAAGACAGCCTTCGTGCTCTTCGTGTTCTTAGCGGTTTTAACCCTTCGTGCCCTTCGTGTCCTTCGTG
GATCAAAAAAGGATAGATAT

Downstream 100 bases:

>100_bases
TGCTTCGACCTCAAGATTATCTGGCGATGTTGCTACGGCGTTGGTGGGTGATTGTGCTGATTGGTTTTGCCAGCGCAGCT
GCTGCGTATGGATTTAGCAA

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MELRRYVAIIQRSWWLVLGVPLLVLLVSLISFQPDPQRYRVNAKFAITHAPVGGNEVLPDMNIYNSWQSTQFIVDDLPSV
VRTEAFAQAISTWIASNRNIQLDAGAVKGMITAVEQEHRIATIIVDADTADQATAIAAGSIAVLDEQGLQWWDRAQWGTL
AVETLELPTTASALSRWPQPITRLALRLVLALVAGLGLAFLRHYLDRTVREQSDLAQLNVPVLVAIPKES

Sequences:

>Translated_230_residues
MELRRYVAIIQRSWWLVLGVPLLVLLVSLISFQPDPQRYRVNAKFAITHAPVGGNEVLPDMNIYNSWQSTQFIVDDLPSV
VRTEAFAQAISTWIASNRNIQLDAGAVKGMITAVEQEHRIATIIVDADTADQATAIAAGSIAVLDEQGLQWWDRAQWGTL
AVETLELPTTASALSRWPQPITRLALRLVLALVAGLGLAFLRHYLDRTVREQSDLAQLNVPVLVAIPKES
>Mature_230_residues
MELRRYVAIIQRSWWLVLGVPLLVLLVSLISFQPDPQRYRVNAKFAITHAPVGGNEVLPDMNIYNSWQSTQFIVDDLPSV
VRTEAFAQAISTWIASNRNIQLDAGAVKGMITAVEQEHRIATIIVDADTADQATAIAAGSIAVLDEQGLQWWDRAQWGTL
AVETLELPTTASALSRWPQPITRLALRLVLALVAGLGLAFLRHYLDRTVREQSDLAQLNVPVLVAIPKES

Specific function: Unknown

COG id: COG3944

COG function: function code M; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25456; Mature: 25456

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELRRYVAIIQRSWWLVLGVPLLVLLVSLISFQPDPQRYRVNAKFAITHAPVGGNEVLPD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEEEEECCCCCCCCCCC
MNIYNSWQSTQFIVDDLPSVVRTEAFAQAISTWIASNRNIQLDAGAVKGMITAVEQEHRI
CHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCE
ATIIVDADTADQATAIAAGSIAVLDEQGLQWWDRAQWGTLAVETLELPTTASALSRWPQP
EEEEEECCCCCCHHHHCCCCEEEECCCCCHHHHCCCCCEEEEEEECCCCHHHHHHHCCHH
ITRLALRLVLALVAGLGLAFLRHYLDRTVREQSDLAQLNVPVLVAIPKES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
>Mature Secondary Structure
MELRRYVAIIQRSWWLVLGVPLLVLLVSLISFQPDPQRYRVNAKFAITHAPVGGNEVLPD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEEEEECCCCCCCCCCC
MNIYNSWQSTQFIVDDLPSVVRTEAFAQAISTWIASNRNIQLDAGAVKGMITAVEQEHRI
CHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCE
ATIIVDADTADQATAIAAGSIAVLDEQGLQWWDRAQWGTLAVETLELPTTASALSRWPQP
EEEEEECCCCCCHHHHCCCCEEEECCCCCHHHHCCCCCEEEEEEECCCCHHHHHHHCCHH
ITRLALRLVLALVAGLGLAFLRHYLDRTVREQSDLAQLNVPVLVAIPKES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA