| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yveL [H]
Identifier: 159900519
GI number: 159900519
Start: 5113439
End: 5114086
Strand: Reverse
Name: yveL [H]
Synonym: Haur_4006
Alternate gene names: 159900519
Gene position: 5114086-5113439 (Counterclockwise)
Preceding gene: 159900520
Following gene: 159900518
Centisome position: 80.58
GC content: 54.63
Gene sequence:
>648_bases GTGGCATTAGATTTAATTACGTTGCGCGATCCACGGGCCGCCGCCGCCGAAGCCTACCGCACCTTGCGCACTAATATTCA ATTTTCGTCGATTGAGCGCAAACTGCACACGATTTTGGTCACCAGCAGCGTACCCGATGAAGATAAAAGCAGCGCTCTCG CCAATTTGGCGGTAACCTTTGCCCAAGCCGAACAACGGGTGATTGTGCTCGATTGCGATTTGCGCCGCCCAAGTTTACAT AGCCTGTTTGGGGTGAGCAATGAGCGTGGCCTGAGCCAAGCCATGAATCAAAACAGTGCTTTGCCAATCGTCAAAACCGA GATCGATGGCCTACAAATTTTGCCTGCTGGCGAAACGCCGCCCAGCCCAGCCGATTTGCTCAGCTCCAAGCGCTTGGATA GCGTGTTGCGCGACCTGAAACAGCAAGCCGATATTGTGTTGATCGATGCGCCGCCTGTTTTAGCGGCCAGCGATGCAGCC TTGTTGGCCACCAAAGTTGATGGGGTGGTGCTGGTGACCAAAGCTGGCAAAACTCGCCGCGACAGTGCCCGCGAGGCCGT AGCCTTGTTGCAACGGGTCAATGCCCATATCGTAGGGGTGATTTTGACCAACGCTAAACTTGAACGCGAACGCTACGCCC GCTATTAA
Upstream 100 bases:
>100_bases CAACAACGATATTGAACGCTGGACTGGCCTACCAACCTTGGGCAGCATTCCCGAATACTAAGCGTCGGCTGAGCCAACCA ATTAGATAGAGGTAGTTATT
Downstream 100 bases:
>100_bases GGATAAGTTTAGATTCCCTCACCCCCTGCCCCCCTCTCCCGCCCAGCAGGCGAGGGGGAACCGCCAAACCAAACGCCCCT AGCCCGCCGCAGTGGGAGAG
Product: exopolysaccharide tyrosine-protein kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MALDLITLRDPRAAAAEAYRTLRTNIQFSSIERKLHTILVTSSVPDEDKSSALANLAVTFAQAEQRVIVLDCDLRRPSLH SLFGVSNERGLSQAMNQNSALPIVKTEIDGLQILPAGETPPSPADLLSSKRLDSVLRDLKQQADIVLIDAPPVLAASDAA LLATKVDGVVLVTKAGKTRRDSAREAVALLQRVNAHIVGVILTNAKLERERYARY
Sequences:
>Translated_215_residues MALDLITLRDPRAAAAEAYRTLRTNIQFSSIERKLHTILVTSSVPDEDKSSALANLAVTFAQAEQRVIVLDCDLRRPSLH SLFGVSNERGLSQAMNQNSALPIVKTEIDGLQILPAGETPPSPADLLSSKRLDSVLRDLKQQADIVLIDAPPVLAASDAA LLATKVDGVVLVTKAGKTRRDSAREAVALLQRVNAHIVGVILTNAKLERERYARY >Mature_214_residues ALDLITLRDPRAAAAEAYRTLRTNIQFSSIERKLHTILVTSSVPDEDKSSALANLAVTFAQAEQRVIVLDCDLRRPSLHS LFGVSNERGLSQAMNQNSALPIVKTEIDGLQILPAGETPPSPADLLSSKRLDSVLRDLKQQADIVLIDAPPVLAASDAAL LATKVDGVVLVTKAGKTRRDSAREAVALLQRVNAHIVGVILTNAKLERERYARY
Specific function: Unknown
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CpsD/CapB family [H]
Homologues:
Organism=Escherichia coli, GI1787216, Length=201, Percent_Identity=32.8358208955224, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI87082032, Length=213, Percent_Identity=30.0469483568075, Blast_Score=116, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: =2.7.10.2 [H]
Molecular weight: Translated: 23323; Mature: 23192
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDLITLRDPRAAAAEAYRTLRTNIQFSSIERKLHTILVTSSVPDEDKSSALANLAVTF CCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHE AQAEQRVIVLDCDLRRPSLHSLFGVSNERGLSQAMNQNSALPIVKTEIDGLQILPAGETP ECCCCEEEEEECCCCCCCHHHHHCCCCCCHHHHHHCCCCCCCEEEECCCCEEEEECCCCC PSPADLLSSKRLDSVLRDLKQQADIVLIDAPPVLAASDAALLATKVDGVVLVTKAGKTRR CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEECCCCEEEEEECCCEEEEECCCCCCH DSAREAVALLQRVNAHIVGVILTNAKLERERYARY HHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHCCC >Mature Secondary Structure ALDLITLRDPRAAAAEAYRTLRTNIQFSSIERKLHTILVTSSVPDEDKSSALANLAVTF CEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHE AQAEQRVIVLDCDLRRPSLHSLFGVSNERGLSQAMNQNSALPIVKTEIDGLQILPAGETP ECCCCEEEEEECCCCCCCHHHHHCCCCCCHHHHHHCCCCCCCEEEECCCCEEEEECCCCC PSPADLLSSKRLDSVLRDLKQQADIVLIDAPPVLAASDAALLATKVDGVVLVTKAGKTRR CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEECCCCEEEEEECCCEEEEECCCCCCH DSAREAVALLQRVNAHIVGVILTNAKLERERYARY HHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]