Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900445

Identifier: 159900445

GI number: 159900445

Start: 4924567

End: 4925538

Strand: Reverse

Name: 159900445

Synonym: Haur_3930

Alternate gene names: NA

Gene position: 4925538-4924567 (Counterclockwise)

Preceding gene: 159900449

Following gene: 159900444

Centisome position: 77.61

GC content: 53.7

Gene sequence:

>972_bases
ATGAAACCCAAGTTTGCACTTTTACTTGCCGCCGTACTGACAACCTTTGTTTTGGCGATTGTGGTTGGCGTGGTTCGTTC
GTTAGCTCAGCCTAGCCCAATTGAATTGGCCGCAGGGATGGATAACACTGTACCAAATGTAATCAGCGATGGTGATGCGC
AGGCCACTGCAACGGCCAGCGATCAAGCCTATCAACAACAATTATTGGAAGCCAGCCAGCGGATCGAAGAAGCCAACCGC
ACGATCGACGAAGCTAATGCCCGGTTGCAAGAGCCAATTGTCGTGCGTGAGCCTGCTCCGGCGCAACAGCCAGTTGCTCA
AGTGCCAGCAGCCCAACCAGTTGCGCAAGCTCCAGCTCAGCCAACCCAAGCTCCGGTTGAACGCTCGAATGCGCCGCAAT
ATGCCATTTCGCCCGATCGAGCTGGCCAATTGGCTTTGGCCGCTGCTCCTGGGGCCAGCTTATTGGCCACGCCAGAGTTA
GTTAATTATGCTGGTACACCTGCTTACGAAGCACGGCTGGATCGCGGCGTGGTCTATATCGATGCCAACACTGGCGCGGT
TTTGGCCAATACTGCGGTTGCACCGCCAACTCAAGTACCAGCCCCAACCAATGCGCCAGCTCCAAGCACAATCTCGCCCG
ATACTGCTGCGAGTGCGGCAGTGGCCTACCTTGGCGGCGGCACGGTGGTCAAAGTCGAGCTGGAAGAAGAACATGGCGCG
TTGGTCTATGAAGTGCGTTTTGCCAACGATAGTCGGGTCTATGTCGATGCCTATAGTGGCAGCGTGGTCTATGCCAAGGT
TGAGTCTGGTAGCAGCAACGATGACAATGGCAACGATGATGCCAATGATGACCATGGTGGTGACAGCAATAGTGGTGGCG
ATGATAACGGCAACGATGACAATGGCAACAATGACGACCACAAAGACGATGATAAAAAAGACGACGACGATAAAAAAGAT
GATGATAACTAA

Upstream 100 bases:

>100_bases
ATTCTTGGAAGATTCTTGGAAAATTCACAAGCTTCGTCAAGAATATTCCAAGAAACAGTTGCTATGCTTGGGTCAGTTAT
TCAAACAACAGGAGGCTCTG

Downstream 100 bases:

>100_bases
GGAAACAACACGATGAGCAATTCACCAAAACGTCGTAGCAGTTTGATGCTCAATACCAGCATGAGTGTTGCCGCAATTGC
GGCGACCCTCACTGGCTGGG

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKPKFALLLAAVLTTFVLAIVVGVVRSLAQPSPIELAAGMDNTVPNVISDGDAQATATASDQAYQQQLLEASQRIEEANR
TIDEANARLQEPIVVREPAPAQQPVAQVPAAQPVAQAPAQPTQAPVERSNAPQYAISPDRAGQLALAAAPGASLLATPEL
VNYAGTPAYEARLDRGVVYIDANTGAVLANTAVAPPTQVPAPTNAPAPSTISPDTAASAAVAYLGGGTVVKVELEEEHGA
LVYEVRFANDSRVYVDAYSGSVVYAKVESGSSNDDNGNDDANDDHGGDSNSGGDDNGNDDNGNNDDHKDDDKKDDDDKKD
DDN

Sequences:

>Translated_323_residues
MKPKFALLLAAVLTTFVLAIVVGVVRSLAQPSPIELAAGMDNTVPNVISDGDAQATATASDQAYQQQLLEASQRIEEANR
TIDEANARLQEPIVVREPAPAQQPVAQVPAAQPVAQAPAQPTQAPVERSNAPQYAISPDRAGQLALAAAPGASLLATPEL
VNYAGTPAYEARLDRGVVYIDANTGAVLANTAVAPPTQVPAPTNAPAPSTISPDTAASAAVAYLGGGTVVKVELEEEHGA
LVYEVRFANDSRVYVDAYSGSVVYAKVESGSSNDDNGNDDANDDHGGDSNSGGDDNGNDDNGNNDDHKDDDKKDDDDKKD
DDN
>Mature_323_residues
MKPKFALLLAAVLTTFVLAIVVGVVRSLAQPSPIELAAGMDNTVPNVISDGDAQATATASDQAYQQQLLEASQRIEEANR
TIDEANARLQEPIVVREPAPAQQPVAQVPAAQPVAQAPAQPTQAPVERSNAPQYAISPDRAGQLALAAAPGASLLATPEL
VNYAGTPAYEARLDRGVVYIDANTGAVLANTAVAPPTQVPAPTNAPAPSTISPDTAASAAVAYLGGGTVVKVELEEEHGA
LVYEVRFANDSRVYVDAYSGSVVYAKVESGSSNDDNGNDDANDDHGGDSNSGGDDNGNDDNGNNDDHKDDDKKDDDDKKD
DDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33480; Mature: 33480

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPKFALLLAAVLTTFVLAIVVGVVRSLAQPSPIELAAGMDNTVPNVISDGDAQATATAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHCCCCCCEEECCH
DQAYQQQLLEASQRIEEANRTIDEANARLQEPIVVREPAPAQQPVAQVPAAQPVAQAPAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHCCCCCCHHHCCCC
PTQAPVERSNAPQYAISPDRAGQLALAAAPGASLLATPELVNYAGTPAYEARLDRGVVYI
CCCCCHHHCCCCCEEECCCCCCCEEEEECCCCCEEECHHHHHCCCCCHHHHHHCCCEEEE
DANTGAVLANTAVAPPTQVPAPTNAPAPSTISPDTAASAAVAYLGGGTVVKVELEEEHGA
ECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEECCCEEEEEEECCCCCE
LVYEVRFANDSRVYVDAYSGSVVYAKVESGSSNDDNGNDDANDDHGGDSNSGGDDNGNDD
EEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NGNNDDHKDDDKKDDDDKKDDDN
CCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKPKFALLLAAVLTTFVLAIVVGVVRSLAQPSPIELAAGMDNTVPNVISDGDAQATATAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHCCCCCCEEECCH
DQAYQQQLLEASQRIEEANRTIDEANARLQEPIVVREPAPAQQPVAQVPAAQPVAQAPAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHCCCCCCHHHCCCC
PTQAPVERSNAPQYAISPDRAGQLALAAAPGASLLATPELVNYAGTPAYEARLDRGVVYI
CCCCCHHHCCCCCEEECCCCCCCEEEEECCCCCEEECHHHHHCCCCCHHHHHHCCCEEEE
DANTGAVLANTAVAPPTQVPAPTNAPAPSTISPDTAASAAVAYLGGGTVVKVELEEEHGA
ECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEECCCEEEEEEECCCCCE
LVYEVRFANDSRVYVDAYSGSVVYAKVESGSSNDDNGNDDANDDHGGDSNSGGDDNGNDD
EEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NGNNDDHKDDDKKDDDDKKDDDN
CCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA