Click here to switch to the map view.

The map label for this gene is ybaB [C]

Identifier: 159900438

GI number: 159900438

Start: 4917500

End: 4917805

Strand: Direct

Name: ybaB [C]

Synonym: Haur_3923

Alternate gene names: 159900438

Gene position: 4917500-4917805 (Clockwise)

Preceding gene: 159900437

Following gene: 159900439

Centisome position: 77.48

GC content: 47.39

Gene sequence:

>306_bases
ATGGATCGCAAAATGCTCAATCAATTGCAACAAATGCAAAAGAAGTTGATGCAAGCTCAAGAAGATTTGGGCAAAACCTT
GGTCGAAGGCAGCGCTGGCGGTGGCGTAATCGAAGTTAAGATGAACGGCCACCGCGAAATTCTCAGCATCACAATCGCCC
CAGAAGCAGTTGACCCCAACGAAATTGAAATGCTGCAAGACTTGCTGATGCTGGCAATCAACGATGCCTCAAAGAAGGCC
GAAGAACTTTCAAACGCCAAAATGGGGCCACTCACTGGCGGCTTGAATATTCCTGGCTTATTCTAA

Upstream 100 bases:

>100_bases
AGAGCGCGTTCATCAACAATAAACCTACTTTGACATTTAGATTGAATTTCTTATACTTGCACTGCTTTAGGCTAGCACTA
TTCAACAAAGGAGTTTCATA

Downstream 100 bases:

>100_bases
ACGGCGGCTTATCCCGACTCAGGGTGGTCGTGCGACCACCCTGTTTTAACTTAACTGTGGAGCGTGTATTGTGGCATTTG
GGTACGATACGATTACACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MDRKMLNQLQQMQKKLMQAQEDLGKTLVEGSAGGGVIEVKMNGHREILSITIAPEAVDPNEIEMLQDLLMLAINDASKKA
EELSNAKMGPLTGGLNIPGLF

Sequences:

>Translated_101_residues
MDRKMLNQLQQMQKKLMQAQEDLGKTLVEGSAGGGVIEVKMNGHREILSITIAPEAVDPNEIEMLQDLLMLAINDASKKA
EELSNAKMGPLTGGLNIPGLF
>Mature_101_residues
MDRKMLNQLQQMQKKLMQAQEDLGKTLVEGSAGGGVIEVKMNGHREILSITIAPEAVDPNEIEMLQDLLMLAINDASKKA
EELSNAKMGPLTGGLNIPGLF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family [H]

Homologues:

Organism=Escherichia coli, GI1786677, Length=97, Percent_Identity=34.020618556701, Blast_Score=67, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004401 [H]

Pfam domain/function: PF02575 DUF149 [H]

EC number: NA

Molecular weight: Translated: 10961; Mature: 10961

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.9 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.9 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRKMLNQLQQMQKKLMQAQEDLGKTLVEGSAGGGVIEVKMNGHREILSITIAPEAVDPN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECCCCCCCH
EIEMLQDLLMLAINDASKKAEELSNAKMGPLTGGLNIPGLF
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDRKMLNQLQQMQKKLMQAQEDLGKTLVEGSAGGGVIEVKMNGHREILSITIAPEAVDPN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECCCCCCCH
EIEMLQDLLMLAINDASKKAEELSNAKMGPLTGGLNIPGLF
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA