Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900431

Identifier: 159900431

GI number: 159900431

Start: 4909986

End: 4910642

Strand: Direct

Name: 159900431

Synonym: Haur_3916

Alternate gene names: NA

Gene position: 4909986-4910642 (Clockwise)

Preceding gene: 159900430

Following gene: 159900432

Centisome position: 77.36

GC content: 54.19

Gene sequence:

>657_bases
ATGACCGTGATCGCTTTAGCCGGAGCCACGGGCTACACCGGCCAACGGATTATCAGCCAAGCTGCCAACAATTCGGAGTG
GCAAGTACGGGCTTTGGTGCGCCAAAGTGCCACTAGCAAAACTCATTTTCCCCTTGGCCAAGCCTTTGCGATCTGCGATT
TTGCTGATCAAGCGAGTGTTGAGGCAGCGCTTGAGGGCTGCGAGGCGGTATTTCAAACGATCGGCACAACTCAAGCTCAA
TTTAATGCCGATGTCAGCTACGAAACCGTCGATTATGGCACAACCATCGCGTTGATCAAAGCAGCCCAAGCGCAAGGAGT
TAAACGCTTTGTGCTGCTTAGCTCGGCGGGTGCAGGCTTGCCGCTCGGCTCATACTTGCGCTGGAAGGCCAAAACCGAAA
AAGCTGTGCGCGAAAGTGGCCTCGATTGGACAATTCTGCGGCCTGCGGCGATTGTCGGGCCAAGCCGCCGCGCAATCCAA
CTAGCAAGCATGCCGTTTGCGCTGCTCAGCAAATTACCTTTGATTGGGCGCTTAGGCGCAATTATGCGGCCAGTTGATGT
CAACGATTTGGCGTTGAGCTTTTTCAAGTGCCTCGCAGACGAAACCACGATTGGCAAAACCCTTGAAGGTCGCTCATTCT
GGCGCTTGATTCGCTAA

Upstream 100 bases:

>100_bases
TGTTTGATCAACGGGTCGCGGTCGATGAGCAGCTCAAGCCAGGCCACTACGATTTGGATCAGCCAACGGGATTGCCCCGT
AAGCGCGAGGAAGCAAGTTT

Downstream 100 bases:

>100_bases
TGAGGTAAACAATGCAACATCTACCAACTGAAGCTTTAATTGCCCGATTGCGAGCCTTACATCTTGGCTCAGCAGTTGAG
CCAGCGCTCCAACTAGCGGT

Product: NAD-dependent epimerase/dehydratase

Products: NAD+; ubiquinol

Alternate protein names: NADH-Ubiquinone Oxidoreductase; Epimerase; Nucleoside-Diphosphate-Sugar Epimerases; Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase-Like

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTVIALAGATGYTGQRIISQAANNSEWQVRALVRQSATSKTHFPLGQAFAICDFADQASVEAALEGCEAVFQTIGTTQAQ
FNADVSYETVDYGTTIALIKAAQAQGVKRFVLLSSAGAGLPLGSYLRWKAKTEKAVRESGLDWTILRPAAIVGPSRRAIQ
LASMPFALLSKLPLIGRLGAIMRPVDVNDLALSFFKCLADETTIGKTLEGRSFWRLIR

Sequences:

>Translated_218_residues
MTVIALAGATGYTGQRIISQAANNSEWQVRALVRQSATSKTHFPLGQAFAICDFADQASVEAALEGCEAVFQTIGTTQAQ
FNADVSYETVDYGTTIALIKAAQAQGVKRFVLLSSAGAGLPLGSYLRWKAKTEKAVRESGLDWTILRPAAIVGPSRRAIQ
LASMPFALLSKLPLIGRLGAIMRPVDVNDLALSFFKCLADETTIGKTLEGRSFWRLIR
>Mature_217_residues
TVIALAGATGYTGQRIISQAANNSEWQVRALVRQSATSKTHFPLGQAFAICDFADQASVEAALEGCEAVFQTIGTTQAQF
NADVSYETVDYGTTIALIKAAQAQGVKRFVLLSSAGAGLPLGSYLRWKAKTEKAVRESGLDWTILRPAAIVGPSRRAIQL
ASMPFALLSKLPLIGRLGAIMRPVDVNDLALSFFKCLADETTIGKTLEGRSFWRLIR

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 23468; Mature: 23337

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVIALAGATGYTGQRIISQAANNSEWQVRALVRQSATSKTHFPLGQAFAICDFADQASV
CEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHH
EAALEGCEAVFQTIGTTQAQFNADVSYETVDYGTTIALIKAAQAQGVKRFVLLSSAGAGL
HHHHHHHHHHHHHHCCCCHHCCCCCCEEEECCCCCEEEHHHHHHCCCEEEEEEECCCCCC
PLGSYLRWKAKTEKAVRESGLDWTILRPAAIVGPSRRAIQLASMPFALLSKLPLIGRLGA
CCCHHHEEHHHHHHHHHHCCCCEEEECCHHHCCCCCCEEEECCCCHHHHHCCCHHHHHHH
IMRPVDVNDLALSFFKCLADETTIGKTLEGRSFWRLIR
HHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure 
TVIALAGATGYTGQRIISQAANNSEWQVRALVRQSATSKTHFPLGQAFAICDFADQASV
EEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHH
EAALEGCEAVFQTIGTTQAQFNADVSYETVDYGTTIALIKAAQAQGVKRFVLLSSAGAGL
HHHHHHHHHHHHHHCCCCHHCCCCCCEEEECCCCCEEEHHHHHHCCCEEEEEEECCCCCC
PLGSYLRWKAKTEKAVRESGLDWTILRPAAIVGPSRRAIQLASMPFALLSKLPLIGRLGA
CCCHHHEEHHHHHHHHHHCCCCEEEECCHHHCCCCCCEEEECCCCHHHHHCCCHHHHHHH
IMRPVDVNDLALSFFKCLADETTIGKTLEGRSFWRLIR
HHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA