| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900431
Identifier: 159900431
GI number: 159900431
Start: 4909986
End: 4910642
Strand: Direct
Name: 159900431
Synonym: Haur_3916
Alternate gene names: NA
Gene position: 4909986-4910642 (Clockwise)
Preceding gene: 159900430
Following gene: 159900432
Centisome position: 77.36
GC content: 54.19
Gene sequence:
>657_bases ATGACCGTGATCGCTTTAGCCGGAGCCACGGGCTACACCGGCCAACGGATTATCAGCCAAGCTGCCAACAATTCGGAGTG GCAAGTACGGGCTTTGGTGCGCCAAAGTGCCACTAGCAAAACTCATTTTCCCCTTGGCCAAGCCTTTGCGATCTGCGATT TTGCTGATCAAGCGAGTGTTGAGGCAGCGCTTGAGGGCTGCGAGGCGGTATTTCAAACGATCGGCACAACTCAAGCTCAA TTTAATGCCGATGTCAGCTACGAAACCGTCGATTATGGCACAACCATCGCGTTGATCAAAGCAGCCCAAGCGCAAGGAGT TAAACGCTTTGTGCTGCTTAGCTCGGCGGGTGCAGGCTTGCCGCTCGGCTCATACTTGCGCTGGAAGGCCAAAACCGAAA AAGCTGTGCGCGAAAGTGGCCTCGATTGGACAATTCTGCGGCCTGCGGCGATTGTCGGGCCAAGCCGCCGCGCAATCCAA CTAGCAAGCATGCCGTTTGCGCTGCTCAGCAAATTACCTTTGATTGGGCGCTTAGGCGCAATTATGCGGCCAGTTGATGT CAACGATTTGGCGTTGAGCTTTTTCAAGTGCCTCGCAGACGAAACCACGATTGGCAAAACCCTTGAAGGTCGCTCATTCT GGCGCTTGATTCGCTAA
Upstream 100 bases:
>100_bases TGTTTGATCAACGGGTCGCGGTCGATGAGCAGCTCAAGCCAGGCCACTACGATTTGGATCAGCCAACGGGATTGCCCCGT AAGCGCGAGGAAGCAAGTTT
Downstream 100 bases:
>100_bases TGAGGTAAACAATGCAACATCTACCAACTGAAGCTTTAATTGCCCGATTGCGAGCCTTACATCTTGGCTCAGCAGTTGAG CCAGCGCTCCAACTAGCGGT
Product: NAD-dependent epimerase/dehydratase
Products: NAD+; ubiquinol
Alternate protein names: NADH-Ubiquinone Oxidoreductase; Epimerase; Nucleoside-Diphosphate-Sugar Epimerases; Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase-Like
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MTVIALAGATGYTGQRIISQAANNSEWQVRALVRQSATSKTHFPLGQAFAICDFADQASVEAALEGCEAVFQTIGTTQAQ FNADVSYETVDYGTTIALIKAAQAQGVKRFVLLSSAGAGLPLGSYLRWKAKTEKAVRESGLDWTILRPAAIVGPSRRAIQ LASMPFALLSKLPLIGRLGAIMRPVDVNDLALSFFKCLADETTIGKTLEGRSFWRLIR
Sequences:
>Translated_218_residues MTVIALAGATGYTGQRIISQAANNSEWQVRALVRQSATSKTHFPLGQAFAICDFADQASVEAALEGCEAVFQTIGTTQAQ FNADVSYETVDYGTTIALIKAAQAQGVKRFVLLSSAGAGLPLGSYLRWKAKTEKAVRESGLDWTILRPAAIVGPSRRAIQ LASMPFALLSKLPLIGRLGAIMRPVDVNDLALSFFKCLADETTIGKTLEGRSFWRLIR >Mature_217_residues TVIALAGATGYTGQRIISQAANNSEWQVRALVRQSATSKTHFPLGQAFAICDFADQASVEAALEGCEAVFQTIGTTQAQF NADVSYETVDYGTTIALIKAAQAQGVKRFVLLSSAGAGLPLGSYLRWKAKTEKAVRESGLDWTILRPAAIVGPSRRAIQL ASMPFALLSKLPLIGRLGAIMRPVDVNDLALSFFKCLADETTIGKTLEGRSFWRLIR
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.6.5.3; 1.6.99.3
Molecular weight: Translated: 23468; Mature: 23337
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVIALAGATGYTGQRIISQAANNSEWQVRALVRQSATSKTHFPLGQAFAICDFADQASV CEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHH EAALEGCEAVFQTIGTTQAQFNADVSYETVDYGTTIALIKAAQAQGVKRFVLLSSAGAGL HHHHHHHHHHHHHHCCCCHHCCCCCCEEEECCCCCEEEHHHHHHCCCEEEEEEECCCCCC PLGSYLRWKAKTEKAVRESGLDWTILRPAAIVGPSRRAIQLASMPFALLSKLPLIGRLGA CCCHHHEEHHHHHHHHHHCCCCEEEECCHHHCCCCCCEEEECCCCHHHHHCCCHHHHHHH IMRPVDVNDLALSFFKCLADETTIGKTLEGRSFWRLIR HHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure TVIALAGATGYTGQRIISQAANNSEWQVRALVRQSATSKTHFPLGQAFAICDFADQASV EEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHH EAALEGCEAVFQTIGTTQAQFNADVSYETVDYGTTIALIKAAQAQGVKRFVLLSSAGAGL HHHHHHHHHHHHHHCCCCHHCCCCCCEEEECCCCCEEEHHHHHHCCCEEEEEEECCCCCC PLGSYLRWKAKTEKAVRESGLDWTILRPAAIVGPSRRAIQLASMPFALLSKLPLIGRLGA CCCHHHEEHHHHHHHHHHCCCCEEEECCHHHCCCCCCEEEECCCCHHHHHCCCHHHHHHH IMRPVDVNDLALSFFKCLADETTIGKTLEGRSFWRLIR HHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; H+; ubiquinone
Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA