| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900429
Identifier: 159900429
GI number: 159900429
Start: 4908012
End: 4909160
Strand: Direct
Name: 159900429
Synonym: Haur_3914
Alternate gene names: NA
Gene position: 4908012-4909160 (Clockwise)
Preceding gene: 159900428
Following gene: 159900430
Centisome position: 77.33
GC content: 47.17
Gene sequence:
>1149_bases ATGAGTGTGCCAATCGTTCAAATTCAGTACCAACAGCTCGAACAACTCGCCCAACGCTTCGCCAAGCAACAAACCCAGGT TCAAGCAATTCTACAAAGCCTCAGGCAAACTATCCAAGCGCTTGAACATGGCGGCTGGATGGGCGATGCAGCCACTGCCT GTTTCAAAGAATTCCATGCCGAGATCGTCCCTGCCTATTGCAAACTTCAGCATGTGTTTAGTGAAAGCCAAACCAGCTTA AACCAAATAGCCCAGCTTTTTCACGAGGCTGAAGCCGAGGCTGCCGGATTATTTCGGGGTGAAATGGCGCAAGCAGTCGG CAACGCTAGCCCTTGGCAGATCCTCAATCATCTTGAAACAAACCTATCCGAGCAACTCAGTCGCTTCCAACCTGAAACTT TAGAACACATGCTTGGTGCGATTGATCCTCAGTCATTTGATATCACTACGGTGCTGGCGCTGATTGAGAACGCCTCGCTG GTCGAACGTCAAGCTATTTTGCAAAATCCAGAAGTATTAAACTTAATCAGGGCCAGCGCAGGTGATCAAGCATATATCGT GATGGCAGTCCTTTCAATTGGATCATTCCGGTGGTTAGCTTCGCAACAAGGAGCAGATGGATGTATTGCGATCTTTCTCA CAGACCCGCTAACCCATGAACCTCGAACTAACAATTTTGCCCAATGGATCTGCACCGTACCTAATTCTAATGAGCCTTCA AGCCAAATATCACCCCCAAATCCGCTCACTGGCTCAATGAATTGTTGGGAATTTGTTTTATTTTCAGCATTCTTGGGTGG AAATATCACCTATGACGAGCTTGATGCAGTCTATTCCGAGGTTGGGACACCAATCACGCTAGAAGAACACAAACAAGCAA TTTATACTGCCCTTGGTGGTGAACACAGCACTGAGTGGAATCCCTGTAATGATATTCCTGCTGGCAGTATTATCTTTTTC GACGATGGCAGCAACCCAATCGCCCACGTTGCCATTGCGACAGGCCGTGAGATCAATGGGTCACCCGAGTTAATTAGTTT GTGGGATCGGCCAAACACTATCGATAGTGTGCAATTTACAACGATTGAGGCATTAAATGGCTCCGATTACACCATCAACG TTGCACCAAACCCTTGGCTGAACGATTAA
Upstream 100 bases:
>100_bases GAGATGGTGATAGCCTAATCGTGCTGAAACGAGTATGCTCCACAACCAATCAATGCGCATAAAACCACATGCCGACTTAA TAGCCACGGAGCCGCTGTCT
Downstream 100 bases:
>100_bases GACTCAGCGTGGTACAATATTCAGCAGACTATTTTTAGCTGAAACGACGATCATTATGGATATTTTAGTCATCGCTTTTT ATAAATTTGTCGATTTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MSVPIVQIQYQQLEQLAQRFAKQQTQVQAILQSLRQTIQALEHGGWMGDAATACFKEFHAEIVPAYCKLQHVFSESQTSL NQIAQLFHEAEAEAAGLFRGEMAQAVGNASPWQILNHLETNLSEQLSRFQPETLEHMLGAIDPQSFDITTVLALIENASL VERQAILQNPEVLNLIRASAGDQAYIVMAVLSIGSFRWLASQQGADGCIAIFLTDPLTHEPRTNNFAQWICTVPNSNEPS SQISPPNPLTGSMNCWEFVLFSAFLGGNITYDELDAVYSEVGTPITLEEHKQAIYTALGGEHSTEWNPCNDIPAGSIIFF DDGSNPIAHVAIATGREINGSPELISLWDRPNTIDSVQFTTIEALNGSDYTINVAPNPWLND
Sequences:
>Translated_382_residues MSVPIVQIQYQQLEQLAQRFAKQQTQVQAILQSLRQTIQALEHGGWMGDAATACFKEFHAEIVPAYCKLQHVFSESQTSL NQIAQLFHEAEAEAAGLFRGEMAQAVGNASPWQILNHLETNLSEQLSRFQPETLEHMLGAIDPQSFDITTVLALIENASL VERQAILQNPEVLNLIRASAGDQAYIVMAVLSIGSFRWLASQQGADGCIAIFLTDPLTHEPRTNNFAQWICTVPNSNEPS SQISPPNPLTGSMNCWEFVLFSAFLGGNITYDELDAVYSEVGTPITLEEHKQAIYTALGGEHSTEWNPCNDIPAGSIIFF DDGSNPIAHVAIATGREINGSPELISLWDRPNTIDSVQFTTIEALNGSDYTINVAPNPWLND >Mature_381_residues SVPIVQIQYQQLEQLAQRFAKQQTQVQAILQSLRQTIQALEHGGWMGDAATACFKEFHAEIVPAYCKLQHVFSESQTSLN QIAQLFHEAEAEAAGLFRGEMAQAVGNASPWQILNHLETNLSEQLSRFQPETLEHMLGAIDPQSFDITTVLALIENASLV ERQAILQNPEVLNLIRASAGDQAYIVMAVLSIGSFRWLASQQGADGCIAIFLTDPLTHEPRTNNFAQWICTVPNSNEPSS QISPPNPLTGSMNCWEFVLFSAFLGGNITYDELDAVYSEVGTPITLEEHKQAIYTALGGEHSTEWNPCNDIPAGSIIFFD DGSNPIAHVAIATGREINGSPELISLWDRPNTIDSVQFTTIEALNGSDYTINVAPNPWLND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42025; Mature: 41894
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPIVQIQYQQLEQLAQRFAKQQTQVQAILQSLRQTIQALEHGGWMGDAATACFKEFHA CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH EIVPAYCKLQHVFSESQTSLNQIAQLFHEAEAEAAGLFRGEMAQAVGNASPWQILNHLET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH NLSEQLSRFQPETLEHMLGAIDPQSFDITTVLALIENASLVERQAILQNPEVLNLIRASA HHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHCC GDQAYIVMAVLSIGSFRWLASQQGADGCIAIFLTDPLTHEPRTNNFAQWICTVPNSNEPS CCCHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCC SQISPPNPLTGSMNCWEFVLFSAFLGGNITYDELDAVYSEVGTPITLEEHKQAIYTALGG CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHCC EHSTEWNPCNDIPAGSIIFFDDGSNPIAHVAIATGREINGSPELISLWDRPNTIDSVQFT CCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCEEEE TIEALNGSDYTINVAPNPWLND EEEEECCCCEEEEECCCCCCCC >Mature Secondary Structure SVPIVQIQYQQLEQLAQRFAKQQTQVQAILQSLRQTIQALEHGGWMGDAATACFKEFHA CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH EIVPAYCKLQHVFSESQTSLNQIAQLFHEAEAEAAGLFRGEMAQAVGNASPWQILNHLET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH NLSEQLSRFQPETLEHMLGAIDPQSFDITTVLALIENASLVERQAILQNPEVLNLIRASA HHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHCC GDQAYIVMAVLSIGSFRWLASQQGADGCIAIFLTDPLTHEPRTNNFAQWICTVPNSNEPS CCCHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCC SQISPPNPLTGSMNCWEFVLFSAFLGGNITYDELDAVYSEVGTPITLEEHKQAIYTALGG CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHCC EHSTEWNPCNDIPAGSIIFFDDGSNPIAHVAIATGREINGSPELISLWDRPNTIDSVQFT CCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCEEEE TIEALNGSDYTINVAPNPWLND EEEEECCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA