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The map label for this gene is arnC [H]

Identifier: 159900415

GI number: 159900415

Start: 4892256

End: 4893020

Strand: Reverse

Name: arnC [H]

Synonym: Haur_3900

Alternate gene names: 159900415

Gene position: 4893020-4892256 (Counterclockwise)

Preceding gene: 159900416

Following gene: 159900414

Centisome position: 77.1

GC content: 46.27

Gene sequence:

>765_bases
ATGACCAGCGAACGTCCAAGTATTTCGGTCTTCTTCCCTGCCTATAATGATGCTGGCACCATTGGTAGCTTGGTGATTAC
AGCATTTCACGTTTTACCCGAACTCACCGATGATTATGAAGTGATCGTGGTTAACGATGGTAGCAGCGATTATACCGCGC
AAGTGCTTGATGATTTAGCCACCAAATATCCACGTTTCCGCCCAATTCACCACCCCAAAAACCGCGGTTATGGCGGAGCG
TTACGCACAGGCTTTGCCTCGGCAACCAAAGATCTGGTGTTTTATACCGATGGCGATGCCCAATACGACCCCAACGAGTT
GCGCGATTTGTATCAAGTGCTGACCCCTGAGGTTGATATTGTCAACGGCTATAAGATTGCCCGTTCTGATCCATTGCATC
GTAAAATTATTGGCCGCATATATCACCATGGAGTCAAATTTTTATTTGGCTTTAAATTACGTGATGTTGATTGTGATTTT
CGGCTGATTCGCCGCAAAGTATTCGATGTAGTCAATCTTGAATCCGATAGCGGCACAATCTGCTTAGAATTGGTCAAAAA
ATTACAAGATGCTGGGTTTAATTTTGCTGAAGTGCCAGTCCATCACTATCATCGCACCTATGGCAAATCGCAGTTTTTCA
ATTTCCCCCGTTTGTGGCGCACGCTGATTCAGTTGTTGCAGCTTTGGTGGAAGTTGGTCATCCTTGGCAAACATCTTAAA
GAACAAGCTGCTCGCCAACGTGCTCTTGGGCGCGACGCGGGCTAA

Upstream 100 bases:

>100_bases
CAATTAACACCAAGGTATGGCGGCAAAGGCGGCGCTTTCTGCTATAATCGCTGCTGTTGACAGTGATCAAAACGATTAAC
AACCAGTCAAAGGATCATAA

Downstream 100 bases:

>100_bases
CGGCTATTTATGGAGGTTGTGTGCTAGAGCAGGCATTTCGTGGCAAGCGTTGTTTGATTACTGGCGGTTTGGGCTTTATT
GGCTCGAATCTCGCATTTCG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MTSERPSISVFFPAYNDAGTIGSLVITAFHVLPELTDDYEVIVVNDGSSDYTAQVLDDLATKYPRFRPIHHPKNRGYGGA
LRTGFASATKDLVFYTDGDAQYDPNELRDLYQVLTPEVDIVNGYKIARSDPLHRKIIGRIYHHGVKFLFGFKLRDVDCDF
RLIRRKVFDVVNLESDSGTICLELVKKLQDAGFNFAEVPVHHYHRTYGKSQFFNFPRLWRTLIQLLQLWWKLVILGKHLK
EQAARQRALGRDAG

Sequences:

>Translated_254_residues
MTSERPSISVFFPAYNDAGTIGSLVITAFHVLPELTDDYEVIVVNDGSSDYTAQVLDDLATKYPRFRPIHHPKNRGYGGA
LRTGFASATKDLVFYTDGDAQYDPNELRDLYQVLTPEVDIVNGYKIARSDPLHRKIIGRIYHHGVKFLFGFKLRDVDCDF
RLIRRKVFDVVNLESDSGTICLELVKKLQDAGFNFAEVPVHHYHRTYGKSQFFNFPRLWRTLIQLLQLWWKLVILGKHLK
EQAARQRALGRDAG
>Mature_253_residues
TSERPSISVFFPAYNDAGTIGSLVITAFHVLPELTDDYEVIVVNDGSSDYTAQVLDDLATKYPRFRPIHHPKNRGYGGAL
RTGFASATKDLVFYTDGDAQYDPNELRDLYQVLTPEVDIVNGYKIARSDPLHRKIIGRIYHHGVKFLFGFKLRDVDCDFR
LIRRKVFDVVNLESDSGTICLELVKKLQDAGFNFAEVPVHHYHRTYGKSQFFNFPRLWRTLIQLLQLWWKLVILGKHLKE
QAARQRALGRDAG

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=218, Percent_Identity=27.0642201834862, Blast_Score=71, Evalue=8e-13,
Organism=Escherichia coli, GI1788588, Length=228, Percent_Identity=26.3157894736842, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787259, Length=122, Percent_Identity=34.4262295081967, Blast_Score=75, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6325029, Length=236, Percent_Identity=25.4237288135593, Blast_Score=69, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24585265, Length=218, Percent_Identity=27.0642201834862, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 29133; Mature: 29001

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSERPSISVFFPAYNDAGTIGSLVITAFHVLPELTDDYEVIVVNDGSSDYTAQVLDDLA
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHH
TKYPRFRPIHHPKNRGYGGALRTGFASATKDLVFYTDGDAQYDPNELRDLYQVLTPEVDI
HCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEE
VNGYKIARSDPLHRKIIGRIYHHGVKFLFGFKLRDVDCDFRLIRRKVFDVVNLESDSGTI
ECCEEECCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHCCCCCCCHH
CLELVKKLQDAGFNFAEVPVHHYHRTYGKSQFFNFPRLWRTLIQLLQLWWKLVILGKHLK
HHHHHHHHHHCCCCEECCCHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EQAARQRALGRDAG
HHHHHHHHCCCCCC
>Mature Secondary Structure 
TSERPSISVFFPAYNDAGTIGSLVITAFHVLPELTDDYEVIVVNDGSSDYTAQVLDDLA
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHH
TKYPRFRPIHHPKNRGYGGALRTGFASATKDLVFYTDGDAQYDPNELRDLYQVLTPEVDI
HCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEE
VNGYKIARSDPLHRKIIGRIYHHGVKFLFGFKLRDVDCDFRLIRRKVFDVVNLESDSGTI
ECCEEECCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHCCCCCCCHH
CLELVKKLQDAGFNFAEVPVHHYHRTYGKSQFFNFPRLWRTLIQLLQLWWKLVILGKHLK
HHHHHHHHHHCCCCEECCCHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EQAARQRALGRDAG
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12219091 [H]