Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900371

Identifier: 159900371

GI number: 159900371

Start: 4840614

End: 4842785

Strand: Direct

Name: 159900371

Synonym: Haur_3856

Alternate gene names: NA

Gene position: 4840614-4842785 (Clockwise)

Preceding gene: 159900363

Following gene: 159900372

Centisome position: 76.27

GC content: 47.56

Gene sequence:

>2172_bases
ATGCTGCCAACTCGCTCAGCACTCAGGCGGATGCTATTGTTATTGGTTATAGGGCATTTGGCAATTTTGGGTATTATCAA
CCGAGCGCCAATAGTTGCTGCGCATGATTCTGCTGCGCTTGTTGATTCAACTCAATTTGTGACTCTTAGCCAACCCGCGT
TAAATCACCTCCAAACCACCCAAACGATCACTGGAACGTGGAATTCACGTTTAGCTAATAACCTCAATATTCCAGGCACG
ATTACTAATTTGGTGTTTGCTGACGATGGCAGATTAACGGTTTTGGGCGATTTCAACTATCTGAATGGCCAATTAGTTAA
CGGGCTTGCCACCATGAGCCAGCAAGGCACGTGGCAAGGCTATGGGCTGCATGCTGATGATAGTGGCACGCTGGCTACGG
CGGCCTACTATCACGATCAACTCTATCTTGGTGGACGGTTTAAGCGCTTAGCTGGAACGCCACTGAACGGAATTGCCCTT
TGGAATGGCACGAATTTTGCGGCTGTTGGTAGTGGGGTTAGCCGTAGCGATGCTACCACTGCTCGGGTTGGGCAATTAGG
CGTGATGAGCGATACACTCTATCTAGCAGGCAATTTCAATCGCTTCAATGGTCAGCCAACGAGCGGGATTATTGGTTGGC
GCAATCAACAGCTTGTGAGCATACCCAGCTATCCAATTGACGAAGTACATGGAATGAAGATCGTTGATGATCGCATGATG
ATAACCCATACCCATCCTGGTGAAGAGCCATATGTGGTAAGTTATGCCTTGTGGCAAAACGATGAATGGATCGAGATGCC
TTGGCCGGATTTTTCCCAACGCTATAATTTCCAATGGTTATTTGCAGGAAACGACGGTTTCTATCGTCCGATCTATAGCG
ATTCCAACCGCACCCATACCCAAGTACAAGTTTGGCAAACCGATCAATGGACGAATAGTATTTCAACGTCGCTCAAATTT
ACCTATATGAGCTTTACCCAACTTGCCAACCAGCAAATTTATGTGAGTGATAGTAAACAACTGTATCAACTTACGCCCGC
TGCTTGGCAATTGGTCAACTTGCCAATGCAAATTCGCCGAATTGACACGCTTGCTAATCGTAATAATCTGCTCTATCTAG
CGGGCGATTTCACCCTCAATGGTCAACCAAGCAGCCTCGTCCGTTGGGATGGAACGCAACTTGAATCGCTTGCCACAACC
ATGCGCTATGCCAATGTTGCTAGCCTTGGTGGGCAGCAAGGCAGACCAATTGCCCATACGAAAGATTTCAACCCATTCGC
TAGCTACGATCAAAAGCTTTTCACTTGGAATACGATTAGTTGGCAGCCTTTAGTGCATAAAATTACTTCGCAACCGTTCC
AAGTGCTCTCGGTTGATGATCAAACCAGCTATTTTGGCTCCGAGCACGCTATTACCACGACCAACAACATTGCGCGAAAT
CTGTGGCAGATTCAGTCCAATGGCACGCTGAGCGATGTCTTTGGCGCGAGCACTGCGATTAGTACTTGGACTATTTCAGG
CTCGCAACTTTTAGGCAATTTGTATGGAGATTTCTTAAAAGGCGTAGTTTTGATCAATCAAGGCCAAATTAGCAATCTTG
CTCCTTATACCTATCCTTTAGCTATTCGCGATCAGGTATTGATGACTGGCGATCAATTGTATGCGGTTGAGCCAAGTGGC
GAACGCGGCTACTGGCACACCCACTTTAAACAGTGGGATGGGACAAGTTGGCAAGAAATTGCAATTTTGGGGATTACCGA
TAGTCAAAGTCGTTTGCAAATTGTTGGCTGGCGCGGCTCGCTTTACTTCCTTGAGCACAATCAGCTACGGCGTTTCAATA
GAACGAGCAGTGATTTGGTTGCGACGTTTGATCAAGTGCCAAATGTCTTGGTGGCTGATGACGATGACTTTTTGTATGTT
GGTGGGCCATTCGCAAGCGTTGATACTGTTGCAACTGGCACGCTAGCGCGGTGGGATGGCACAAGTTGGCAAGGCCTAGC
TCAGCCAGCCAATGGCGAGGTTACCCAAATTAGTGTCAACGATCGGCATTTGTATCTTGCAGGCAAATTTACTCATGTTG
GGGAAACGCCCTCGTTGGGTGTGGCTGCACTCAGCTTTGGGCCGCCCGAAAATACAACATATCTGTGCTATTTGCCGCAG
ATCGTGCGTTAA

Upstream 100 bases:

>100_bases
CAGCGATTGATTCGATTTACGGTGTTTACAAATTATTAAAAATCTGCTATATCACTAGATAGTTAGTTAATTTACTCAAC
AATTATTAAGGAGTTTGTCA

Downstream 100 bases:

>100_bases
GTAAGGCAGCGATTAATCGCTGTTGATGCTGCCCAAGTGGGTTTGATTGATGGTACTTGATCAAACCCACTTGGGGTTTA
ACCTACTAGCGGCGATTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 723; Mature: 723

Protein sequence:

>723_residues
MLPTRSALRRMLLLLVIGHLAILGIINRAPIVAAHDSAALVDSTQFVTLSQPALNHLQTTQTITGTWNSRLANNLNIPGT
ITNLVFADDGRLTVLGDFNYLNGQLVNGLATMSQQGTWQGYGLHADDSGTLATAAYYHDQLYLGGRFKRLAGTPLNGIAL
WNGTNFAAVGSGVSRSDATTARVGQLGVMSDTLYLAGNFNRFNGQPTSGIIGWRNQQLVSIPSYPIDEVHGMKIVDDRMM
ITHTHPGEEPYVVSYALWQNDEWIEMPWPDFSQRYNFQWLFAGNDGFYRPIYSDSNRTHTQVQVWQTDQWTNSISTSLKF
TYMSFTQLANQQIYVSDSKQLYQLTPAAWQLVNLPMQIRRIDTLANRNNLLYLAGDFTLNGQPSSLVRWDGTQLESLATT
MRYANVASLGGQQGRPIAHTKDFNPFASYDQKLFTWNTISWQPLVHKITSQPFQVLSVDDQTSYFGSEHAITTTNNIARN
LWQIQSNGTLSDVFGASTAISTWTISGSQLLGNLYGDFLKGVVLINQGQISNLAPYTYPLAIRDQVLMTGDQLYAVEPSG
ERGYWHTHFKQWDGTSWQEIAILGITDSQSRLQIVGWRGSLYFLEHNQLRRFNRTSSDLVATFDQVPNVLVADDDDFLYV
GGPFASVDTVATGTLARWDGTSWQGLAQPANGEVTQISVNDRHLYLAGKFTHVGETPSLGVAALSFGPPENTTYLCYLPQ
IVR

Sequences:

>Translated_723_residues
MLPTRSALRRMLLLLVIGHLAILGIINRAPIVAAHDSAALVDSTQFVTLSQPALNHLQTTQTITGTWNSRLANNLNIPGT
ITNLVFADDGRLTVLGDFNYLNGQLVNGLATMSQQGTWQGYGLHADDSGTLATAAYYHDQLYLGGRFKRLAGTPLNGIAL
WNGTNFAAVGSGVSRSDATTARVGQLGVMSDTLYLAGNFNRFNGQPTSGIIGWRNQQLVSIPSYPIDEVHGMKIVDDRMM
ITHTHPGEEPYVVSYALWQNDEWIEMPWPDFSQRYNFQWLFAGNDGFYRPIYSDSNRTHTQVQVWQTDQWTNSISTSLKF
TYMSFTQLANQQIYVSDSKQLYQLTPAAWQLVNLPMQIRRIDTLANRNNLLYLAGDFTLNGQPSSLVRWDGTQLESLATT
MRYANVASLGGQQGRPIAHTKDFNPFASYDQKLFTWNTISWQPLVHKITSQPFQVLSVDDQTSYFGSEHAITTTNNIARN
LWQIQSNGTLSDVFGASTAISTWTISGSQLLGNLYGDFLKGVVLINQGQISNLAPYTYPLAIRDQVLMTGDQLYAVEPSG
ERGYWHTHFKQWDGTSWQEIAILGITDSQSRLQIVGWRGSLYFLEHNQLRRFNRTSSDLVATFDQVPNVLVADDDDFLYV
GGPFASVDTVATGTLARWDGTSWQGLAQPANGEVTQISVNDRHLYLAGKFTHVGETPSLGVAALSFGPPENTTYLCYLPQ
IVR
>Mature_723_residues
MLPTRSALRRMLLLLVIGHLAILGIINRAPIVAAHDSAALVDSTQFVTLSQPALNHLQTTQTITGTWNSRLANNLNIPGT
ITNLVFADDGRLTVLGDFNYLNGQLVNGLATMSQQGTWQGYGLHADDSGTLATAAYYHDQLYLGGRFKRLAGTPLNGIAL
WNGTNFAAVGSGVSRSDATTARVGQLGVMSDTLYLAGNFNRFNGQPTSGIIGWRNQQLVSIPSYPIDEVHGMKIVDDRMM
ITHTHPGEEPYVVSYALWQNDEWIEMPWPDFSQRYNFQWLFAGNDGFYRPIYSDSNRTHTQVQVWQTDQWTNSISTSLKF
TYMSFTQLANQQIYVSDSKQLYQLTPAAWQLVNLPMQIRRIDTLANRNNLLYLAGDFTLNGQPSSLVRWDGTQLESLATT
MRYANVASLGGQQGRPIAHTKDFNPFASYDQKLFTWNTISWQPLVHKITSQPFQVLSVDDQTSYFGSEHAITTTNNIARN
LWQIQSNGTLSDVFGASTAISTWTISGSQLLGNLYGDFLKGVVLINQGQISNLAPYTYPLAIRDQVLMTGDQLYAVEPSG
ERGYWHTHFKQWDGTSWQEIAILGITDSQSRLQIVGWRGSLYFLEHNQLRRFNRTSSDLVATFDQVPNVLVADDDDFLYV
GGPFASVDTVATGTLARWDGTSWQGLAQPANGEVTQISVNDRHLYLAGKFTHVGETPSLGVAALSFGPPENTTYLCYLPQ
IVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80406; Mature: 80406

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPTRSALRRMLLLLVIGHLAILGIINRAPIVAAHDSAALVDSTQFVTLSQPALNHLQTT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCEEEEECCHHHHHHHCC
QTITGTWNSRLANNLNIPGTITNLVFADDGRLTVLGDFNYLNGQLVNGLATMSQQGTWQG
EEEECCCCHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCE
YGLHADDSGTLATAAYYHDQLYLGGRFKRLAGTPLNGIALWNGTNFAAVGSGVSRSDATT
EEEECCCCCCEEEEEEEECEEEECCCCHHHCCCCCCCEEEECCCCEEEECCCCCCCCCCH
ARVGQLGVMSDTLYLAGNFNRFNGQPTSGIIGWRNQQLVSIPSYPIDEVHGMKIVDDRMM
HHHCCEEEEECEEEEEECCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCEEECCEEE
ITHTHPGEEPYVVSYALWQNDEWIEMPWPDFSQRYNFQWLFAGNDGFYRPIYSDSNRTHT
EEECCCCCCCEEEEEEEECCCCEEECCCCCHHHCCCEEEEEECCCCEECCEECCCCCCEE
QVQVWQTDQWTNSISTSLKFTYMSFTQLANQQIYVSDSKQLYQLTPAAWQLVNLPMQIRR
EEEEEECCCCCCCCCCEEEEEEEEHHHHCCCEEEEECCCEEEEECHHHHHHHCCCHHHHH
IDTLANRNNLLYLAGDFTLNGQPSSLVRWDGTQLESLATTMRYANVASLGGQQGRPIAHT
HHHHHCCCCEEEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KDFNPFASYDQKLFTWNTISWQPLVHKITSQPFQVLSVDDQTSYFGSEHAITTTNNIARN
CCCCCHHHCCCEEEEEECCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEECHHHHHH
LWQIQSNGTLSDVFGASTAISTWTISGSQLLGNLYGDFLKGVVLINQGQISNLAPYTYPL
HEEEECCCCHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEEEE
AIRDQVLMTGDQLYAVEPSGERGYWHTHFKQWDGTSWQEIAILGITDSQSRLQIVGWRGS
EECCEEEEECCEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEECCE
LYFLEHNQLRRFNRTSSDLVATFDQVPNVLVADDDDFLYVGGPFASVDTVATGTLARWDG
EEEEECHHHHHHCCCCHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCHHCCCEEEECCC
TSWQGLAQPANGEVTQISVNDRHLYLAGKFTHVGETPSLGVAALSFGPPENTTYLCYLPQ
CCCCCCCCCCCCCEEEEEECCEEEEEEEEEEECCCCCCCCEEEEECCCCCCCEEEEECCH
IVR
HCC
>Mature Secondary Structure
MLPTRSALRRMLLLLVIGHLAILGIINRAPIVAAHDSAALVDSTQFVTLSQPALNHLQTT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCEEEEECCHHHHHHHCC
QTITGTWNSRLANNLNIPGTITNLVFADDGRLTVLGDFNYLNGQLVNGLATMSQQGTWQG
EEEECCCCHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCE
YGLHADDSGTLATAAYYHDQLYLGGRFKRLAGTPLNGIALWNGTNFAAVGSGVSRSDATT
EEEECCCCCCEEEEEEEECEEEECCCCHHHCCCCCCCEEEECCCCEEEECCCCCCCCCCH
ARVGQLGVMSDTLYLAGNFNRFNGQPTSGIIGWRNQQLVSIPSYPIDEVHGMKIVDDRMM
HHHCCEEEEECEEEEEECCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCEEECCEEE
ITHTHPGEEPYVVSYALWQNDEWIEMPWPDFSQRYNFQWLFAGNDGFYRPIYSDSNRTHT
EEECCCCCCCEEEEEEEECCCCEEECCCCCHHHCCCEEEEEECCCCEECCEECCCCCCEE
QVQVWQTDQWTNSISTSLKFTYMSFTQLANQQIYVSDSKQLYQLTPAAWQLVNLPMQIRR
EEEEEECCCCCCCCCCEEEEEEEEHHHHCCCEEEEECCCEEEEECHHHHHHHCCCHHHHH
IDTLANRNNLLYLAGDFTLNGQPSSLVRWDGTQLESLATTMRYANVASLGGQQGRPIAHT
HHHHHCCCCEEEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KDFNPFASYDQKLFTWNTISWQPLVHKITSQPFQVLSVDDQTSYFGSEHAITTTNNIARN
CCCCCHHHCCCEEEEEECCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEECHHHHHH
LWQIQSNGTLSDVFGASTAISTWTISGSQLLGNLYGDFLKGVVLINQGQISNLAPYTYPL
HEEEECCCCHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEEEE
AIRDQVLMTGDQLYAVEPSGERGYWHTHFKQWDGTSWQEIAILGITDSQSRLQIVGWRGS
EECCEEEEECCEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEECCE
LYFLEHNQLRRFNRTSSDLVATFDQVPNVLVADDDDFLYVGGPFASVDTVATGTLARWDG
EEEEECHHHHHHCCCCHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCHHCCCEEEECCC
TSWQGLAQPANGEVTQISVNDRHLYLAGKFTHVGETPSLGVAALSFGPPENTTYLCYLPQ
CCCCCCCCCCCCCEEEEEECCEEEEEEEEEEECCCCCCCCEEEEECCCCCCCEEEEECCH
IVR
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA