| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900337
Identifier: 159900337
GI number: 159900337
Start: 4794922
End: 4795347
Strand: Reverse
Name: 159900337
Synonym: Haur_3820
Alternate gene names: NA
Gene position: 4795347-4794922 (Counterclockwise)
Preceding gene: 159900338
Following gene: 159900336
Centisome position: 75.56
GC content: 52.35
Gene sequence:
>426_bases GTGGAATTTGTGATTATGCAGTTTACCGTTTTAGCCGCGTCGATTAAACGCGGGCTTGGCGAGCATGGCACGGCGATCCG TTTGTTTGGCAGTGCGCTTGGCTTGCTAATCGCTGGTCAATTGTGTTATCGCAAGGCCTTGCTTGGCGCAACGCAACATA ACCTTGAAAGCTTATGGCAGGTGAGCCAAAGTTTTTGGGGCATGCTGGGGATTGGCTTAATTCTGCTTTCGCTGTTCCCA TGGTTGGCGCTGTTGGCCCGCCGCCAACTTAGCTTCTTCTACCCACTTTGGAGCATTGCCACCATTGTGTTGGTGGTGAT CAATTGGTGGTGGTTTGGCGGTGGCATGTCGTGGCAAACCCTCGCCGGAATTGGCTTGGTTTTGCTGGGAGTTAGCCTCT TGTTTCGTGGCGGGCATAGTATTTGA
Upstream 100 bases:
>100_bases ATGCACTGGCTTGATCGTGGTGATGCGATTCGCCAAGATGAAGATTATGGCCGCTTGTTCGCGCCTTATTTTACGATTCA ACGCCGCTGGACAATTCGCA
Downstream 100 bases:
>100_bases GTAATTGGGGGTCGGTTGTTGGGGGTCGCTTACAAGGGTAGGTTTTAATAATGATTGGGTGGGATCTGAAGTCGATTTGG ATGCCCTCACCCCCTAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MEFVIMQFTVLAASIKRGLGEHGTAIRLFGSALGLLIAGQLCYRKALLGATQHNLESLWQVSQSFWGMLGIGLILLSLFP WLALLARRQLSFFYPLWSIATIVLVVINWWWFGGGMSWQTLAGIGLVLLGVSLLFRGGHSI
Sequences:
>Translated_141_residues MEFVIMQFTVLAASIKRGLGEHGTAIRLFGSALGLLIAGQLCYRKALLGATQHNLESLWQVSQSFWGMLGIGLILLSLFP WLALLARRQLSFFYPLWSIATIVLVVINWWWFGGGMSWQTLAGIGLVLLGVSLLFRGGHSI >Mature_141_residues MEFVIMQFTVLAASIKRGLGEHGTAIRLFGSALGLLIAGQLCYRKALLGATQHNLESLWQVSQSFWGMLGIGLILLSLFP WLALLARRQLSFFYPLWSIATIVLVVINWWWFGGGMSWQTLAGIGLVLLGVSLLFRGGHSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15577; Mature: 15577
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFVIMQFTVLAASIKRGLGEHGTAIRLFGSALGLLIAGQLCYRKALLGATQHNLESLWQ CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSQSFWGMLGIGLILLSLFPWLALLARRQLSFFYPLWSIATIVLVVINWWWFGGGMSWQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LAGIGLVLLGVSLLFRGGHSI HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEFVIMQFTVLAASIKRGLGEHGTAIRLFGSALGLLIAGQLCYRKALLGATQHNLESLWQ CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSQSFWGMLGIGLILLSLFPWLALLARRQLSFFYPLWSIATIVLVVINWWWFGGGMSWQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LAGIGLVLLGVSLLFRGGHSI HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA