| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900313
Identifier: 159900313
GI number: 159900313
Start: 4766895
End: 4767452
Strand: Reverse
Name: 159900313
Synonym: Haur_3796
Alternate gene names: NA
Gene position: 4767452-4766895 (Counterclockwise)
Preceding gene: 159900314
Following gene: 159900311
Centisome position: 75.12
GC content: 47.13
Gene sequence:
>558_bases ATGCCTAAATTTTTGCACAAATTTGGCCAACCACGCCTGATTTGGCTAGCCTTTGGTGTAGCCATGACCCAATTAGTGAT TAGTAATCTGTTGGCAAGCTTATTTCATTCGTGGACTAGGGGCTATGGCTTGTTGGATTTGGGCGGTGGTGCAAATGCAT TTTCGGCCAAATCCAGCGTTACAGCTGATTTAGCCTATCAATTAATCAGCAATTATGGCGAATATCGCAGCAGTCATGTG TGGCTGATTGTGCCCGACATGCTGTTACCGATTGGAGTTTGGCTCTTTTTTGGGCTAGCGTTGCTGCGGCTGACGCGTGA TGTTCACGGTTGGCAACAGTGGCTACCAGCCTTGGCGAGCCTCTATTTCTTCGCCGATTATGCTGAGAATAGCTGCGAAG CCCTGATGTTATTGCAATATCCTACCCAATTGCCAACTGTGGCTATGCTCTGGACTTGGTGTTTTACGCTCAAAAATCTC GCTGTTGGTTTAAATATTGGGGCAATCGTGCTGATATTCCTGTGGCGCTGGCGGCAAGCTCAATCAAAATCACGTTAA
Upstream 100 bases:
>100_bases AGCCGACAGCCGCTCAAATTGGGGCGGTTTTTTCATGCTTGACAGCTAGTTTCGATCATCGCTATGCTTTGGCTGAATTT AATCTGATCGTGAGCAACCA
Downstream 100 bases:
>100_bases ATGAATAAGGCCCGCAGATTGATTGCAGGCCTTGTGCTAGCAGGAAAGTCTATTCAGCGGCGCGGCTGCCTAATTGTTCA TTGAGCAAGAACAGCGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MPKFLHKFGQPRLIWLAFGVAMTQLVISNLLASLFHSWTRGYGLLDLGGGANAFSAKSSVTADLAYQLISNYGEYRSSHV WLIVPDMLLPIGVWLFFGLALLRLTRDVHGWQQWLPALASLYFFADYAENSCEALMLLQYPTQLPTVAMLWTWCFTLKNL AVGLNIGAIVLIFLWRWRQAQSKSR
Sequences:
>Translated_185_residues MPKFLHKFGQPRLIWLAFGVAMTQLVISNLLASLFHSWTRGYGLLDLGGGANAFSAKSSVTADLAYQLISNYGEYRSSHV WLIVPDMLLPIGVWLFFGLALLRLTRDVHGWQQWLPALASLYFFADYAENSCEALMLLQYPTQLPTVAMLWTWCFTLKNL AVGLNIGAIVLIFLWRWRQAQSKSR >Mature_184_residues PKFLHKFGQPRLIWLAFGVAMTQLVISNLLASLFHSWTRGYGLLDLGGGANAFSAKSSVTADLAYQLISNYGEYRSSHVW LIVPDMLLPIGVWLFFGLALLRLTRDVHGWQQWLPALASLYFFADYAENSCEALMLLQYPTQLPTVAMLWTWCFTLKNLA VGLNIGAIVLIFLWRWRQAQSKSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21016; Mature: 20885
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKFLHKFGQPRLIWLAFGVAMTQLVISNLLASLFHSWTRGYGLLDLGGGANAFSAKSSV CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHH TADLAYQLISNYGEYRSSHVWLIVPDMLLPIGVWLFFGLALLRLTRDVHGWQQWLPALAS HHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYFFADYAENSCEALMLLQYPTQLPTVAMLWTWCFTLKNLAVGLNIGAIVLIFLWRWRQA HHHHHHHHCCCHHEEHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH QSKSR HCCCC >Mature Secondary Structure PKFLHKFGQPRLIWLAFGVAMTQLVISNLLASLFHSWTRGYGLLDLGGGANAFSAKSSV CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHH TADLAYQLISNYGEYRSSHVWLIVPDMLLPIGVWLFFGLALLRLTRDVHGWQQWLPALAS HHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYFFADYAENSCEALMLLQYPTQLPTVAMLWTWCFTLKNLAVGLNIGAIVLIFLWRWRQA HHHHHHHHCCCHHEEHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH QSKSR HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA