| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900300
Identifier: 159900300
GI number: 159900300
Start: 4752299
End: 4752694
Strand: Direct
Name: 159900300
Synonym: Haur_3783
Alternate gene names: NA
Gene position: 4752299-4752694 (Clockwise)
Preceding gene: 159900299
Following gene: 159900301
Centisome position: 74.88
GC content: 54.8
Gene sequence:
>396_bases GTGTCCACTCGCACGATTTTGGACCGTTATCAAACGAGTGCCTCGTATCTAGCGCGCATTTTACTCCGTTTTTCGGGCTT GTTGCTCACGGTGTATATGCTGACGTACATTTGGGAATTGAGCACGGTAATTCGCACCAGCGATGAGCCGGCTGGCACCG CTGCGGCGGCCTTCAACACGGCGATGGCTGCGTACAACACGACCTTCTGGCATATTACCCATGCGGTGGTTGTGGCGCTG GTGGTGTTGCATGCCCTAACTGGCTTGCGGGTTTTGACCCTTGAGGCAGGGTTTGGCGCTCGCTTCCAACGAGCCTCTTT CTGGCTTTCGTTGGTCTTGACGGTGGCGCTGTTTGTGCTGCTCTTTATTAAGATTATCGCCAATCTGGCGGCGTAA
Upstream 100 bases:
>100_bases GCCATTTTTCTATACCTTAGAGACAGAGCTTGATCTTTTTGTGGAACGCTTGCAGGCTCTTAGCCAGTAATTTGGAATTC AGCATCAATAAGGAGGTTAC
Downstream 100 bases:
>100_bases CGGCTGGAAAGGAATCGCTTCAATGGTGCACCGAGATGTTATCAGCGTTACAAGCCGCGCTCAAAAGGTTAAAGTAGAAC CTGGTGCGGGCACGCTGTTG
Product: hypothetical protein
Products: fumarate; reduced acceptor
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSTRTILDRYQTSASYLARILLRFSGLLLTVYMLTYIWELSTVIRTSDEPAGTAAAAFNTAMAAYNTTFWHITHAVVVAL VVLHALTGLRVLTLEAGFGARFQRASFWLSLVLTVALFVLLFIKIIANLAA
Sequences:
>Translated_131_residues MSTRTILDRYQTSASYLARILLRFSGLLLTVYMLTYIWELSTVIRTSDEPAGTAAAAFNTAMAAYNTTFWHITHAVVVAL VVLHALTGLRVLTLEAGFGARFQRASFWLSLVLTVALFVLLFIKIIANLAA >Mature_130_residues STRTILDRYQTSASYLARILLRFSGLLLTVYMLTYIWELSTVIRTSDEPAGTAAAAFNTAMAAYNTTFWHITHAVVVALV VLHALTGLRVLTLEAGFGARFQRASFWLSLVLTVALFVLLFIKIIANLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.3.99.1
Molecular weight: Translated: 14471; Mature: 14340
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRTILDRYQTSASYLARILLRFSGLLLTVYMLTYIWELSTVIRTSDEPAGTAAAAFNT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AMAAYNTTFWHITHAVVVALVVLHALTGLRVLTLEAGFGARFQRASFWLSLVLTVALFVL HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHH LFIKIIANLAA HHHHHHHHHCC >Mature Secondary Structure STRTILDRYQTSASYLARILLRFSGLLLTVYMLTYIWELSTVIRTSDEPAGTAAAAFNT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AMAAYNTTFWHITHAVVVALVVLHALTGLRVLTLEAGFGARFQRASFWLSLVLTVALFVL HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHH LFIKIIANLAA HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: succinate; acceptor
Specific reaction: succinate + acceptor = fumarate + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA