| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900269
Identifier: 159900269
GI number: 159900269
Start: 4716715
End: 4719036
Strand: Reverse
Name: 159900269
Synonym: Haur_3752
Alternate gene names: NA
Gene position: 4719036-4716715 (Counterclockwise)
Preceding gene: 159900270
Following gene: 159900264
Centisome position: 74.36
GC content: 50.3
Gene sequence:
>2322_bases ATGAAACGTGCGCGTTTATTAATGTTCGTGGTGCTAGCTGGCTTGTTAACGCCGCTGGGTGTATGGGCGCGGCCTGTAAC GCCACCCCAAGCCCAGCCGCAAGCCCCGAATACAGTCAATTTTTTCGTAGATCCTAATTCCTTTGCAGATACCATGGTTC CTGGGCAATCGCGCCAATTTGCATTTCAAATTCAGAGCCTAAGTAGCTCTAATGAAAGTGCAAATTTTACATTTGCTCCA GAGGGATTACCACCCCAAATTACAGTTAATGCAATTGCTCCTGTGACAGGGGTAAATCCAAGTGATCAGGTTACAGTTTT GGCTACAATTAATATTGCAGCTACTGCTCCCTTGCAAACGTATACATTTAGGATTCGTGTTACTGCTACTGGCAATACTA CAGGTGTTGCCAGTTCAAGAATTGTTGATTTTCTTATTAATGTCGTAGCGCCAACAGCAACTCCAACTCGTACTAATACA CCTACCGCCACTGCTCCAACGGCTACCAATACTGGCACGCCTGGGCGGATTTGCGATGGTAATGGTGGCACGGTTAACGA TAAATTTGAGCCAAATAATACCCGCAGCCAGGCTCGCCGAATTGAAGTTGATGTGCCGCAAGTGCACGCGATTTGTCCAG TTGGCGACGAAGATTGGCTCTTATTTGGCGGTTTAGAGGGCAAAGTCTATACGATCGATGTTTCGCAAATGGTCGATGGG CTGGATCTTTCGTTGACGCTTTACGATAGCAACGGCAATCAATTGGCCTTTAACGATGACTTTCCGCGCAACAATGATCC CAGCGATATCAAGCCACGAATTCAATCGTGGCGTGCGCCCGCCAACGGCCAATACTACATTAAGGTGCGCGATTCCGCCG GACGCGGCTTTATTGATGCGCTCTACACAGTGGTGTTGAATAGTGAAAGTTATGGCCCCACGCCAACGCTCATCCCTGAA ATTTGTAAAGATCTCTACGAGCCGGATGGCTTGCCTGAAATTGCACCGTTGATTGTGGTTGGCGAAGTTCATCCCGACCA TCGGTTGTGCCCACGCGGTGATGCCGATTGGGTCAAATTCTTTGGCAAAGCTGGCAAAGTCTATTCGATCTTTACCTCGG AACTCAGTGTTGGTGCTGATACAGTGATGGTCTTGGCTGATCGCGATGGCACAACGATTATCGATTTCAACGATGATTAT GAATCAGGCTTGGATTCGCGAATCGATTTCGCGCCGTTCGTCGATGGCTTCTATTTTGTGCAGGTCAAGAATGTTGGCGA TGTTGGCAATCAGTTTATCGATTACACCTTGACCTTCCAGATCAAAACTAATGCCAACCAAGGCGAACCAACCATGCAGC CAACCGCAACCTTCGAAGATGATATTACGCCAACTTTCGAGGATGATGTTACGCCAACTAGCGATCCTAATCGCACGGCA ACCGCGACTGGCACGGCGACCCGCACGCCAACTTCGGCCTATCCAACCCCAACCACTTCATCGAGCAACAAATTGCCCAA CTTCGATACGCGCAGCAATGGCAAATTTGCCGACCCAGCCTTTAACAAGGTTTGGGCTTATGCCGATGCTCCAGTGGCGA GTGGCCAAGCAGTGCGCTCTTGGTTGTGGGGGCCGAGCAGCGGCCAAGCCCGCGCCGAGGTTTACGATCAAGCGCCTGGT GGTTTGCGTCAAGTGCAATATTTCGATAAATCGCGCATGGAAATTAGCGATTTCGAGGCCGACCGCCAAAGCCAATGGTT TGTGACCAACGGCTTGCTGGCGAAGGAATTGATTCAGGGCCAGATTCAAATTGGCGATAGCAATTATGTGCAGCGTAGTC CGGCCCAAATTAATATTGCTGGCGATTTAGGCGCTGCTTCGGCTCCAACCTACGCCAGTTTTAGCAATTTGCTTGGCGCA ACCAGCGATCGTACTGGTCAATTCGCCGATCAGCAATTAGCGCGTAGTGGCAAAGTGAGCGCTTATGCTGGCGCTGCAAC TGATGCAGCTAAGTTGGTGCATTATGTGCCACAAACTGGCCACAACATCCCTAGCGCCTTCTGGGATTTTGTCAATCGTC AAGGCTTGGTTAGCCAAAATGGCCGTACCCAAAACGGCCAAGTGATGGATTGGGTTTTTGCTTTGGGCTACCCAATTAGC GAAGCCTACTGGGCCAAGGTCTATGTTGGTGGTGTTGAGCAAACTGTGTTGGTGCAAGCCTTCGAGCGCCGCGTGCTGAC CTACACTCCCAGCAATCCCGCCGATTGGCAAGTCGAAATGGGTAATGTCGGCCAACACTACGAACAATGGCGCTACCGCT AG
Upstream 100 bases:
>100_bases CCCAAAATCAATATTTGACGTTATAATGGGCTAGAATAGCGATGCTGCTCTTTTTAACCCATTTGTCAAATCAACCAGCC TTGAAGCGGAGAAGTTGCCT
Downstream 100 bases:
>100_bases ATTAAATTCTTCGCTTCAAGGCTAAAATAAAACGCCCCGTGTTCTGAACAAAACACGGGGCGTTTTTTATCATGAAATAA CTACACTGAATAATATCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 773; Mature: 773
Protein sequence:
>773_residues MKRARLLMFVVLAGLLTPLGVWARPVTPPQAQPQAPNTVNFFVDPNSFADTMVPGQSRQFAFQIQSLSSSNESANFTFAP EGLPPQITVNAIAPVTGVNPSDQVTVLATINIAATAPLQTYTFRIRVTATGNTTGVASSRIVDFLINVVAPTATPTRTNT PTATAPTATNTGTPGRICDGNGGTVNDKFEPNNTRSQARRIEVDVPQVHAICPVGDEDWLLFGGLEGKVYTIDVSQMVDG LDLSLTLYDSNGNQLAFNDDFPRNNDPSDIKPRIQSWRAPANGQYYIKVRDSAGRGFIDALYTVVLNSESYGPTPTLIPE ICKDLYEPDGLPEIAPLIVVGEVHPDHRLCPRGDADWVKFFGKAGKVYSIFTSELSVGADTVMVLADRDGTTIIDFNDDY ESGLDSRIDFAPFVDGFYFVQVKNVGDVGNQFIDYTLTFQIKTNANQGEPTMQPTATFEDDITPTFEDDVTPTSDPNRTA TATGTATRTPTSAYPTPTTSSSNKLPNFDTRSNGKFADPAFNKVWAYADAPVASGQAVRSWLWGPSSGQARAEVYDQAPG GLRQVQYFDKSRMEISDFEADRQSQWFVTNGLLAKELIQGQIQIGDSNYVQRSPAQINIAGDLGAASAPTYASFSNLLGA TSDRTGQFADQQLARSGKVSAYAGAATDAAKLVHYVPQTGHNIPSAFWDFVNRQGLVSQNGRTQNGQVMDWVFALGYPIS EAYWAKVYVGGVEQTVLVQAFERRVLTYTPSNPADWQVEMGNVGQHYEQWRYR
Sequences:
>Translated_773_residues MKRARLLMFVVLAGLLTPLGVWARPVTPPQAQPQAPNTVNFFVDPNSFADTMVPGQSRQFAFQIQSLSSSNESANFTFAP EGLPPQITVNAIAPVTGVNPSDQVTVLATINIAATAPLQTYTFRIRVTATGNTTGVASSRIVDFLINVVAPTATPTRTNT PTATAPTATNTGTPGRICDGNGGTVNDKFEPNNTRSQARRIEVDVPQVHAICPVGDEDWLLFGGLEGKVYTIDVSQMVDG LDLSLTLYDSNGNQLAFNDDFPRNNDPSDIKPRIQSWRAPANGQYYIKVRDSAGRGFIDALYTVVLNSESYGPTPTLIPE ICKDLYEPDGLPEIAPLIVVGEVHPDHRLCPRGDADWVKFFGKAGKVYSIFTSELSVGADTVMVLADRDGTTIIDFNDDY ESGLDSRIDFAPFVDGFYFVQVKNVGDVGNQFIDYTLTFQIKTNANQGEPTMQPTATFEDDITPTFEDDVTPTSDPNRTA TATGTATRTPTSAYPTPTTSSSNKLPNFDTRSNGKFADPAFNKVWAYADAPVASGQAVRSWLWGPSSGQARAEVYDQAPG GLRQVQYFDKSRMEISDFEADRQSQWFVTNGLLAKELIQGQIQIGDSNYVQRSPAQINIAGDLGAASAPTYASFSNLLGA TSDRTGQFADQQLARSGKVSAYAGAATDAAKLVHYVPQTGHNIPSAFWDFVNRQGLVSQNGRTQNGQVMDWVFALGYPIS EAYWAKVYVGGVEQTVLVQAFERRVLTYTPSNPADWQVEMGNVGQHYEQWRYR >Mature_773_residues MKRARLLMFVVLAGLLTPLGVWARPVTPPQAQPQAPNTVNFFVDPNSFADTMVPGQSRQFAFQIQSLSSSNESANFTFAP EGLPPQITVNAIAPVTGVNPSDQVTVLATINIAATAPLQTYTFRIRVTATGNTTGVASSRIVDFLINVVAPTATPTRTNT PTATAPTATNTGTPGRICDGNGGTVNDKFEPNNTRSQARRIEVDVPQVHAICPVGDEDWLLFGGLEGKVYTIDVSQMVDG LDLSLTLYDSNGNQLAFNDDFPRNNDPSDIKPRIQSWRAPANGQYYIKVRDSAGRGFIDALYTVVLNSESYGPTPTLIPE ICKDLYEPDGLPEIAPLIVVGEVHPDHRLCPRGDADWVKFFGKAGKVYSIFTSELSVGADTVMVLADRDGTTIIDFNDDY ESGLDSRIDFAPFVDGFYFVQVKNVGDVGNQFIDYTLTFQIKTNANQGEPTMQPTATFEDDITPTFEDDVTPTSDPNRTA TATGTATRTPTSAYPTPTTSSSNKLPNFDTRSNGKFADPAFNKVWAYADAPVASGQAVRSWLWGPSSGQARAEVYDQAPG GLRQVQYFDKSRMEISDFEADRQSQWFVTNGLLAKELIQGQIQIGDSNYVQRSPAQINIAGDLGAASAPTYASFSNLLGA TSDRTGQFADQQLARSGKVSAYAGAATDAAKLVHYVPQTGHNIPSAFWDFVNRQGLVSQNGRTQNGQVMDWVFALGYPIS EAYWAKVYVGGVEQTVLVQAFERRVLTYTPSNPADWQVEMGNVGQHYEQWRYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84174; Mature: 84174
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRARLLMFVVLAGLLTPLGVWARPVTPPQAQPQAPNTVNFFVDPNSFADTMVPGQSRQF CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEE AFQIQSLSSSNESANFTFAPEGLPPQITVNAIAPVTGVNPSDQVTVLATINIAATAPLQT EEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCEEE YTFRIRVTATGNTTGVASSRIVDFLINVVAPTATPTRTNTPTATAPTATNTGTPGRICDG EEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC NGGTVNDKFEPNNTRSQARRIEVDVPQVHAICPVGDEDWLLFGGLEGKVYTIDVSQMVDG CCCEECCCCCCCCCHHHHEEEEECCCCEEEEECCCCCCEEEEECCCCEEEEEEHHHHHCC LDLSLTLYDSNGNQLAFNDDFPRNNDPSDIKPRIQSWRAPANGQYYIKVRDSAGRGFIDA CEEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCHHHHH LYTVVLNSESYGPTPTLIPEICKDLYEPDGLPEIAPLIVVGEVHPDHRLCPRGDADWVKF HEEHEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH FGKAGKVYSIFTSELSVGADTVMVLADRDGTTIIDFNDDYESGLDSRIDFAPFVDGFYFV HCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEECCCCHHCCCCCCCCCCCCCCCEEEE QVKNVGDVGNQFIDYTLTFQIKTNANQGEPTMQPTATFEDDITPTFEDDVTPTSDPNRTA EECCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE TATGTATRTPTSAYPTPTTSSSNKLPNFDTRSNGKFADPAFNKVWAYADAPVASGQAVRS EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCHHHHH WLWGPSSGQARAEVYDQAPGGLRQVQYFDKSRMEISDFEADRQSQWFVTNGLLAKELIQG HHCCCCCCCCHHHHHHCCCCCHHHHHHHCCCCCEEHHCCCCCCCCEEEECCHHHHHHHCC QIQIGDSNYVQRSPAQINIAGDLGAASAPTYASFSNLLGATSDRTGQFADQQLARSGKVS EEEECCCCCEECCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCE AYAGAATDAAKLVHYVPQTGHNIPSAFWDFVNRQGLVSQNGRTQNGQVMDWVFALGYPIS EECCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHCCCCCC EAYWAKVYVGGVEQTVLVQAFERRVLTYTPSNPADWQVEMGNVGQHYEQWRYR CCEEEEEEECCCCHHHHHHHHHCEEEEECCCCCCCEEEEECCCHHHHHHHCCC >Mature Secondary Structure MKRARLLMFVVLAGLLTPLGVWARPVTPPQAQPQAPNTVNFFVDPNSFADTMVPGQSRQF CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEE AFQIQSLSSSNESANFTFAPEGLPPQITVNAIAPVTGVNPSDQVTVLATINIAATAPLQT EEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCEEE YTFRIRVTATGNTTGVASSRIVDFLINVVAPTATPTRTNTPTATAPTATNTGTPGRICDG EEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC NGGTVNDKFEPNNTRSQARRIEVDVPQVHAICPVGDEDWLLFGGLEGKVYTIDVSQMVDG CCCEECCCCCCCCCHHHHEEEEECCCCEEEEECCCCCCEEEEECCCCEEEEEEHHHHHCC LDLSLTLYDSNGNQLAFNDDFPRNNDPSDIKPRIQSWRAPANGQYYIKVRDSAGRGFIDA CEEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCHHHHH LYTVVLNSESYGPTPTLIPEICKDLYEPDGLPEIAPLIVVGEVHPDHRLCPRGDADWVKF HEEHEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH FGKAGKVYSIFTSELSVGADTVMVLADRDGTTIIDFNDDYESGLDSRIDFAPFVDGFYFV HCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEECCCCHHCCCCCCCCCCCCCCCEEEE QVKNVGDVGNQFIDYTLTFQIKTNANQGEPTMQPTATFEDDITPTFEDDVTPTSDPNRTA EECCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE TATGTATRTPTSAYPTPTTSSSNKLPNFDTRSNGKFADPAFNKVWAYADAPVASGQAVRS EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCHHHHH WLWGPSSGQARAEVYDQAPGGLRQVQYFDKSRMEISDFEADRQSQWFVTNGLLAKELIQG HHCCCCCCCCHHHHHHCCCCCHHHHHHHCCCCCEEHHCCCCCCCCEEEECCHHHHHHHCC QIQIGDSNYVQRSPAQINIAGDLGAASAPTYASFSNLLGATSDRTGQFADQQLARSGKVS EEEECCCCCEECCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCE AYAGAATDAAKLVHYVPQTGHNIPSAFWDFVNRQGLVSQNGRTQNGQVMDWVFALGYPIS EECCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHCCCCCC EAYWAKVYVGGVEQTVLVQAFERRVLTYTPSNPADWQVEMGNVGQHYEQWRYR CCEEEEEEECCCCHHHHHHHHHCEEEEECCCCCCCEEEEECCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA