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The map label for this gene is ypjH [H]

Identifier: 159900252

GI number: 159900252

Start: 4694431

End: 4695498

Strand: Reverse

Name: ypjH [H]

Synonym: Haur_3735

Alternate gene names: 159900252

Gene position: 4695498-4694431 (Counterclockwise)

Preceding gene: 159900253

Following gene: 159900251

Centisome position: 73.98

GC content: 53.84

Gene sequence:

>1068_bases
ATGCAGCAATTGCGAATTGCGTTCTTGGATTCGTGGTTACAGGCGGTGGTTGATGGCAGCGGCACGGCGGCGGCAATCGG
CGGTTTAGCGCGTACCTTGCAAGCCCGTGGCCATGTAGTTGATCGGATTGTGCCAACTGGCAATTGGCCGCGTAATTTAA
CCTTGCGCCGCCTTTATTACAATTGGCAATTGCCGCGTCGCCTTGCCAACCACCGCTATGATTTGGTGGTTGGTTTTGAT
ATTGATGGATTCCGAGTTGCCCAGCGCTTAAATGTGCCCTATATCTGTAGCATCAAAGGCGTAATTGCCGAAGAACAGCG
CCATGAACAAGGCTTTATTCGGGCGTTGCTCTGGTCGCTCTCGCGGATTGAATTGATCAATGCGCGGCGTGCCCCCAAGG
TTATTTCAACCAGCGAATATTGCCGCCAGATGATTCATGCGCATTATGCTGTGACGATCAGCAAGATTGGGATTGTGCCC
GAGGGCATCGATTTGAGTTTGTGGCAGGAGCAAGCCCACAGTAGCCAGCGCGATCCATGGACGGTGCTATGTGTGGCCCG
CCAATATCCACGCAAACATGTGATTGACTTGATTCGGGCCTTTGCCAGCGTGATCGAACAAGTGCCCCAAGCCCAATTGG
TGATCATCGGCGATGGCCCTGACCACGATATGTTGCGTGGCGTGGTACGAGCCTATAATCTCGAAAGCTCGGTGCGCATG
CTCGGCGCGATTGCCGATGATGCTGAAGTGCGAGCGTGGTATGGGCGCAGCAGCATTTTCTGCTTGCCCAGCGTCCAAGA
AGGCTTTGGGATCGTCTTTTTAGAGGCGATGGCTAGTGGCTTGCCAATTGTCAGCACCAATGCTGCGGCGATTCCCGAGG
TTGTGCCGCATGGTCAGGCTGGCACGTTGGTGGAGCCAAGCGATGTAACGGCAATCGCCGAGGCGTTGATTGAGCTATTG
CAAAACCCCGAGCTACAACAGCGCTACCGCGATTATGGTTTGCAGCATGTTCAACAATATGCTTGGGAGCATGTGACCGA
TCGCTTTTTAGCAGCAGTTTTGGCATAG

Upstream 100 bases:

>100_bases
AAAATTATCAACCCAAGATATTAATGATTTGATTGGTTATATGCTAACGCTAAAAAGTGGCATTGATTAAGCGCGTTAGC
CTTGAATACATGTAGGTGCT

Downstream 100 bases:

>100_bases
TGTGTTAACATCCGTGCGGCGAGTGTTGAGCCATGGTTGAGAGTGCTATAATGACCATGAACAAAACAAGCCTCGCTGAA
AGGAGCGAAGATGTTAACGT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MQQLRIAFLDSWLQAVVDGSGTAAAIGGLARTLQARGHVVDRIVPTGNWPRNLTLRRLYYNWQLPRRLANHRYDLVVGFD
IDGFRVAQRLNVPYICSIKGVIAEEQRHEQGFIRALLWSLSRIELINARRAPKVISTSEYCRQMIHAHYAVTISKIGIVP
EGIDLSLWQEQAHSSQRDPWTVLCVARQYPRKHVIDLIRAFASVIEQVPQAQLVIIGDGPDHDMLRGVVRAYNLESSVRM
LGAIADDAEVRAWYGRSSIFCLPSVQEGFGIVFLEAMASGLPIVSTNAAAIPEVVPHGQAGTLVEPSDVTAIAEALIELL
QNPELQQRYRDYGLQHVQQYAWEHVTDRFLAAVLA

Sequences:

>Translated_355_residues
MQQLRIAFLDSWLQAVVDGSGTAAAIGGLARTLQARGHVVDRIVPTGNWPRNLTLRRLYYNWQLPRRLANHRYDLVVGFD
IDGFRVAQRLNVPYICSIKGVIAEEQRHEQGFIRALLWSLSRIELINARRAPKVISTSEYCRQMIHAHYAVTISKIGIVP
EGIDLSLWQEQAHSSQRDPWTVLCVARQYPRKHVIDLIRAFASVIEQVPQAQLVIIGDGPDHDMLRGVVRAYNLESSVRM
LGAIADDAEVRAWYGRSSIFCLPSVQEGFGIVFLEAMASGLPIVSTNAAAIPEVVPHGQAGTLVEPSDVTAIAEALIELL
QNPELQQRYRDYGLQHVQQYAWEHVTDRFLAAVLA
>Mature_355_residues
MQQLRIAFLDSWLQAVVDGSGTAAAIGGLARTLQARGHVVDRIVPTGNWPRNLTLRRLYYNWQLPRRLANHRYDLVVGFD
IDGFRVAQRLNVPYICSIKGVIAEEQRHEQGFIRALLWSLSRIELINARRAPKVISTSEYCRQMIHAHYAVTISKIGIVP
EGIDLSLWQEQAHSSQRDPWTVLCVARQYPRKHVIDLIRAFASVIEQVPQAQLVIIGDGPDHDMLRGVVRAYNLESSVRM
LGAIADDAEVRAWYGRSSIFCLPSVQEGFGIVFLEAMASGLPIVSTNAAAIPEVVPHGQAGTLVEPSDVTAIAEALIELL
QNPELQQRYRDYGLQHVQQYAWEHVTDRFLAAVLA

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI11863130, Length=161, Percent_Identity=30.4347826086957, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1788357, Length=161, Percent_Identity=32.2981366459627, Blast_Score=74, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17532709, Length=153, Percent_Identity=28.1045751633987, Blast_Score=69, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI9755344, Length=208, Percent_Identity=22.1153846153846, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24654571, Length=142, Percent_Identity=28.169014084507, Blast_Score=79, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 39770; Mature: 39770

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQLRIAFLDSWLQAVVDGSGTAAAIGGLARTLQARGHVVDRIVPTGNWPRNLTLRRLYY
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEEEE
NWQLPRRLANHRYDLVVGFDIDGFRVAQRLNVPYICSIKGVIAEEQRHEQGFIRALLWSL
CCCCHHHHHCCCEEEEEEECCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
SRIELINARRAPKVISTSEYCRQMIHAHYAVTISKIGIVPEGIDLSLWQEQAHSSQRDPW
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEHHHCCCCCCCCHHHHHHHHCCCCCCCE
TVLCVARQYPRKHVIDLIRAFASVIEQVPQAQLVIIGDGPDHDMLRGVVRAYNLESSVRM
EEEEEEHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHH
LGAIADDAEVRAWYGRSSIFCLPSVQEGFGIVFLEAMASGLPIVSTNAAAIPEVVPHGQA
HHHHCCCCHHEEEECCCCEEECCCCCCCCCCEEHHHHHCCCCEEECCCHHCCHHCCCCCC
GTLVEPSDVTAIAEALIELLQNPELQQRYRDYGLQHVQQYAWEHVTDRFLAAVLA
CCEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MQQLRIAFLDSWLQAVVDGSGTAAAIGGLARTLQARGHVVDRIVPTGNWPRNLTLRRLYY
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEEEE
NWQLPRRLANHRYDLVVGFDIDGFRVAQRLNVPYICSIKGVIAEEQRHEQGFIRALLWSL
CCCCHHHHHCCCEEEEEEECCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
SRIELINARRAPKVISTSEYCRQMIHAHYAVTISKIGIVPEGIDLSLWQEQAHSSQRDPW
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEHHHCCCCCCCCHHHHHHHHCCCCCCCE
TVLCVARQYPRKHVIDLIRAFASVIEQVPQAQLVIIGDGPDHDMLRGVVRAYNLESSVRM
EEEEEEHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHH
LGAIADDAEVRAWYGRSSIFCLPSVQEGFGIVFLEAMASGLPIVSTNAAAIPEVVPHGQA
HHHHCCCCHHEEEECCCCEEECCCCCCCCCCEEHHHHHCCCCEEECCCHHCCHHCCCCCC
GTLVEPSDVTAIAEALIELLQNPELQQRYRDYGLQHVQQYAWEHVTDRFLAAVLA
CCEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]