| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900240
Identifier: 159900240
GI number: 159900240
Start: 4683759
End: 4684526
Strand: Direct
Name: 159900240
Synonym: Haur_3723
Alternate gene names: NA
Gene position: 4683759-4684526 (Clockwise)
Preceding gene: 159900237
Following gene: 159900242
Centisome position: 73.8
GC content: 50.39
Gene sequence:
>768_bases ATGCAATCGATCGATCGCTTAATGATGAGCTTTGCTGGGCAATGGTCGGTTGATTTTCGCAGTTGCACTGGAGCAATTTA TTATCAATATCAACCAAGCTTGCAATTACCGTCGGCCAGTTTGATCAAATTGTTCTTGGCTTGGCAATGGTATACAACCA ATCAGCCTGGATTCGACGTATTGATTAGTGAACAGCTGATTGTTGATCTTGATGGCTCGTTGGCGCAGGCGATTGGTAGC AAGTTTAGCAGCGATCACATGATTTATCTCATGCTCAATCAATCGGAAAACAACGCCACCAATGTGTTGTTAGCCCAATT GGGCGGAATTCAGGCGGCAAACAGTTGGTTGCAGCAAGCGGGCTATCAGGCAACGCGCTGGGGGCGGGTCATGCTCGATT TTCAGGCCCGTCAGCAGGGCTTGGAAAACTATACTAGCGCCGAGGAGCTAACTAGGCTGTTACACACCATGACCGATGCC ATAGCCAAGGGGGGATCAATGGCTAGTACCCTCGTAAAGAGTCTCGTTAACTCAGCGAGTGACGATAAAATAGCTGCAAG CTTACCACCAGCGGTAGTATGCGCCCACAAATCGGGGGAGCTAGCCGACGTTGAACACGACGCAGCATTAATCTACAGCG CTGGCATGTGGGATAGTTTGGTAATCATGGCAGCGGCAGTACCCGACCCAACTACCGCCCGTCAACAGATTCGCCAGCTA ACCAGCGAACTCTGGCCCAATAAAAAACCTGTTCCACCGCAGGGGTGA
Upstream 100 bases:
>100_bases CACGGTCACCCAAACGCTAAAATGCAAACAATAGAGCTATTTTAAACCCAAACCTGATTAATAAAAAGTCAAATTCACCT TTTTAGGCAAGGAATCCGCC
Downstream 100 bases:
>100_bases AACAGGAAACATGGGTGGGGGATTAAATGGCTATTGGCCTATTGCGGGCCGTAGATATCAAGCGCAATATTATTACGATT GCTCGGATCAATTTTGACTG
Product: beta-lactamase class A-like protein
Products: substituted beta-amino acid
Alternate protein names: Beta-Lactamase Class A-Like Protein; Beta-Lactamase Class A; NLP/P60 Protein
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MQSIDRLMMSFAGQWSVDFRSCTGAIYYQYQPSLQLPSASLIKLFLAWQWYTTNQPGFDVLISEQLIVDLDGSLAQAIGS KFSSDHMIYLMLNQSENNATNVLLAQLGGIQAANSWLQQAGYQATRWGRVMLDFQARQQGLENYTSAEELTRLLHTMTDA IAKGGSMASTLVKSLVNSASDDKIAASLPPAVVCAHKSGELADVEHDAALIYSAGMWDSLVIMAAAVPDPTTARQQIRQL TSELWPNKKPVPPQG
Sequences:
>Translated_255_residues MQSIDRLMMSFAGQWSVDFRSCTGAIYYQYQPSLQLPSASLIKLFLAWQWYTTNQPGFDVLISEQLIVDLDGSLAQAIGS KFSSDHMIYLMLNQSENNATNVLLAQLGGIQAANSWLQQAGYQATRWGRVMLDFQARQQGLENYTSAEELTRLLHTMTDA IAKGGSMASTLVKSLVNSASDDKIAASLPPAVVCAHKSGELADVEHDAALIYSAGMWDSLVIMAAAVPDPTTARQQIRQL TSELWPNKKPVPPQG >Mature_255_residues MQSIDRLMMSFAGQWSVDFRSCTGAIYYQYQPSLQLPSASLIKLFLAWQWYTTNQPGFDVLISEQLIVDLDGSLAQAIGS KFSSDHMIYLMLNQSENNATNVLLAQLGGIQAANSWLQQAGYQATRWGRVMLDFQARQQGLENYTSAEELTRLLHTMTDA IAKGGSMASTLVKSLVNSASDDKIAASLPPAVVCAHKSGELADVEHDAALIYSAGMWDSLVIMAAAVPDPTTARQQIRQL TSELWPNKKPVPPQG
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.2.6
Molecular weight: Translated: 27931; Mature: 27931
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00501 SPASE_I_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSIDRLMMSFAGQWSVDFRSCTGAIYYQYQPSLQLPSASLIKLFLAWQWYTTNQPGFDV CCHHHHHHHHHCCCCCCCHHCCCCEEEEEECCCCCCCHHHHHHHHHHHEEEECCCCCCEE LISEQLIVDLDGSLAQAIGSKFSSDHMIYLMLNQSENNATNVLLAQLGGIQAANSWLQQA EECCEEEEECCCHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHC GYQATRWGRVMLDFQARQQGLENYTSAEELTRLLHTMTDAIAKGGSMASTLVKSLVNSAS CCCHHCCCHHEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC DDKIAASLPPAVVCAHKSGELADVEHDAALIYSAGMWDSLVIMAAAVPDPTTARQQIRQL CCCEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHH TSELWPNKKPVPPQG HHHHCCCCCCCCCCC >Mature Secondary Structure MQSIDRLMMSFAGQWSVDFRSCTGAIYYQYQPSLQLPSASLIKLFLAWQWYTTNQPGFDV CCHHHHHHHHHCCCCCCCHHCCCCEEEEEECCCCCCCHHHHHHHHHHHEEEECCCCCCEE LISEQLIVDLDGSLAQAIGSKFSSDHMIYLMLNQSENNATNVLLAQLGGIQAANSWLQQA EECCEEEEECCCHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHC GYQATRWGRVMLDFQARQQGLENYTSAEELTRLLHTMTDAIAKGGSMASTLVKSLVNSAS CCCHHCCCHHEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC DDKIAASLPPAVVCAHKSGELADVEHDAALIYSAGMWDSLVIMAAAVPDPTTARQQIRQL CCCEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHH TSELWPNKKPVPPQG HHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: beta-lactam; H2O
Specific reaction: A beta-lactam + H2O = a substituted beta-amino acid
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA