| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900236
Identifier: 159900236
GI number: 159900236
Start: 4678824
End: 4679459
Strand: Reverse
Name: 159900236
Synonym: Haur_3719
Alternate gene names: NA
Gene position: 4679459-4678824 (Counterclockwise)
Preceding gene: 159900238
Following gene: 159900235
Centisome position: 73.73
GC content: 50.79
Gene sequence:
>636_bases ATGCCCGATGGAAATGCCTATGATCAGGCCTACTATGCGATGTCGCGGCCTGAGGCTGGACGCAAAAGCTTGGTTGATAC CTTACGTGATCGGTATATTCGTCGCCATGTATTGCGTTTTCGCCAAACTGGGCGACTGTTGGATATTGGCTGCGGCTTAG GCTTATTTTTGCAGTCGATGACCCCGCCGTTTGAGCCATTTGGCACTGATATTTCAGCTTATGCTGTGGCGCAAGCGCAA CAACGCATGCCCCAAGCCAAATTATTCGTTGGCAGCATTTTAGATGGACTGCCATTTAGCGTTAATTTCGATGTGATTAC CGCGATCAACGTGGTTGAACATTTGGAGCAGCCAGCCTTAGCGGTTGCCGCAATTCGCGAACGCTTGCAAGTAGGTGGTT TGTTTGTAGCGCACTTGCCGACAATTGGCAATCGGTTGCAAGCCCGCATTTATCGCGGCTCGTATGATGCCGACCCAACC CATATTTATCGGCCAAGTGGGGCTGAATTTCGCGGCGTTGCTGAAGCTGCTGGGTTCAAAACTGTCTTTGAAACCTATTC ACCCTTTGCTCCTGCGGTTCTATGGCGCAATTTGCCTTGGCATCCCGCCTATTTGGCACTATTTCAAGCTCGCTAG
Upstream 100 bases:
>100_bases GCAGTTTGATGCTACACTGAATACTGGCACACATTTTGGTGCTCAATCGCTATCACCATGATTGAGCCTAGGTAGATTGT TAATTGAAGGGGTTGCTGCT
Downstream 100 bases:
>100_bases CACTTCCAATGGCTTATTGGATGACCAGGGGCTTTGATCCCTCGCATCCCCTCGAGCGCAATCAGGGGCAGTTCGTTATC CATCGATGAACCACGGAATC
Product: type 12 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MPDGNAYDQAYYAMSRPEAGRKSLVDTLRDRYIRRHVLRFRQTGRLLDIGCGLGLFLQSMTPPFEPFGTDISAYAVAQAQ QRMPQAKLFVGSILDGLPFSVNFDVITAINVVEHLEQPALAVAAIRERLQVGGLFVAHLPTIGNRLQARIYRGSYDADPT HIYRPSGAEFRGVAEAAGFKTVFETYSPFAPAVLWRNLPWHPAYLALFQAR
Sequences:
>Translated_211_residues MPDGNAYDQAYYAMSRPEAGRKSLVDTLRDRYIRRHVLRFRQTGRLLDIGCGLGLFLQSMTPPFEPFGTDISAYAVAQAQ QRMPQAKLFVGSILDGLPFSVNFDVITAINVVEHLEQPALAVAAIRERLQVGGLFVAHLPTIGNRLQARIYRGSYDADPT HIYRPSGAEFRGVAEAAGFKTVFETYSPFAPAVLWRNLPWHPAYLALFQAR >Mature_210_residues PDGNAYDQAYYAMSRPEAGRKSLVDTLRDRYIRRHVLRFRQTGRLLDIGCGLGLFLQSMTPPFEPFGTDISAYAVAQAQQ RMPQAKLFVGSILDGLPFSVNFDVITAINVVEHLEQPALAVAAIRERLQVGGLFVAHLPTIGNRLQARIYRGSYDADPTH IYRPSGAEFRGVAEAAGFKTVFETYSPFAPAVLWRNLPWHPAYLALFQAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23572; Mature: 23441
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDGNAYDQAYYAMSRPEAGRKSLVDTLRDRYIRRHVLRFRQTGRLLDIGCGLGLFLQSM CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHC TPPFEPFGTDISAYAVAQAQQRMPQAKLFVGSILDGLPFSVNFDVITAINVVEHLEQPAL CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHH AVAAIRERLQVGGLFVAHLPTIGNRLQARIYRGSYDADPTHIYRPSGAEFRGVAEAAGFK HHHHHHHHHHHCCCCEEHHCCHHHHHHHHEECCCCCCCCCEEECCCCCCHHHHHHHHHHH TVFETYSPFAPAVLWRNLPWHPAYLALFQAR HHHHHCCCHHHHHHHCCCCCCHHHHHEECCC >Mature Secondary Structure PDGNAYDQAYYAMSRPEAGRKSLVDTLRDRYIRRHVLRFRQTGRLLDIGCGLGLFLQSM CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHC TPPFEPFGTDISAYAVAQAQQRMPQAKLFVGSILDGLPFSVNFDVITAINVVEHLEQPAL CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHH AVAAIRERLQVGGLFVAHLPTIGNRLQARIYRGSYDADPTHIYRPSGAEFRGVAEAAGFK HHHHHHHHHHHCCCCEEHHCCHHHHHHHHEECCCCCCCCCEEECCCCCCHHHHHHHHHHH TVFETYSPFAPAVLWRNLPWHPAYLALFQAR HHHHHCCCHHHHHHHCCCCCCHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA