| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900233
Identifier: 159900233
GI number: 159900233
Start: 4674206
End: 4675333
Strand: Reverse
Name: 159900233
Synonym: Haur_3716
Alternate gene names: NA
Gene position: 4675333-4674206 (Counterclockwise)
Preceding gene: 159900234
Following gene: 159900231
Centisome position: 73.67
GC content: 52.84
Gene sequence:
>1128_bases ATGACAATTGTTGAGGGATTAATCAATCTTGGGGTGTTTTTGATCGGGCTGGTGATTGTGGCATTCACGCTATTTAGTGC GATTCGCATGGTCGTGTTGCCACGCGGCGATAATGTTTGGCTGACGCGCACCACCTTTCGGCTGGTCTACGGCTGCTTTT TGGTGCGTTTGCGCCGAATCAACAACTACGAACAAGCCGATCGGGTGCTGGCATTTTATGCGCCAGTGGCCTTGCTGATT ATTCCAGTGGTTTGGATGGTGTTGGCAATTGCCGGCTTTACCTGTATGTTTTGGGCGGTTGGCGAGCATCCTTGGAGTAA AGCATTTTTGCTGAGTGGCTCGTCGATGTTGACGCTGGGGTTTGCCGCAGTTGATTCAACGGTTGAAACAATTTTGGCCT TTTTGGCGGCAACGGTTGGCTTAGGCATTGTGGCTTTGTTAATTGCCTATCTGCCAACGATGTACGGGGCTTTTTCCAAG CGCGAAGAAGCCGTGACCTTGCTGGAAGTGCGGGCAGGCACGCCGCCATCGGCAATTACCATGATTCAGCGCTATCAGCG GATTCATAATTTGGAGCGTATGCCTGAGCAATGGGCAATTTGGGAGCAATGGTTTGCCGAATTAGAGGAGAGCCATACCA CCTTTGCGGCCTTGGCGTTTTTTCGTTCGCCCCAGCCGTATCGCTCGTGGATCACCGCTTCAGCGGCGGTGTTGGATTCC GCAGCGTTGGCAGTTTCGACCCTTGATATCCCGCGCCAGCCAGATGCCGATTTGTGCATTCGGGCGGGCTATTTGGCGCT GCGCCGCATCGCCGATTTGTATATGATTCCCTACAATGCCACGCCGCATGCCGATGATCCAATTAGCATCACGCGGGCTG ATTTTGATCAGGCTTGTGCTGAATTGATCGCTAGTGGCGTGCCACTCAAAGCTGATCGCGACCAAGCATGGCGTGATTTT GCTGGTTGGCGGGTCAATTACGATCAAGTGTTGATCGAATTAGCCAAATTGGTAACCGCCCCGCCAGCCCCTTGGACAGG CGAACGTCCGCTGCCATTATGTTTCAACATGCCACGTTTTGGCCATAAACGCCGCCAACTAGCCAAAGAGCCAACTGGCT CAATGTAA
Upstream 100 bases:
>100_bases ATAACACGAAATGTTCCCAAGCCATTTTTGATTTTTGCCTTCTGACTTTATTCTTCAAGGTATACAATATCCCAAGGCAC TTGCAAGCATCGAGGATACT
Downstream 100 bases:
>100_bases CCCATATTCCCCTCATCCCCTAGCCCCTCTCCCGCAAGCGAGGCGAGGGAGAAGCGCTACGCATTATGGTAGAACCACGC ATTTAAAGCCCCTCGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MTIVEGLINLGVFLIGLVIVAFTLFSAIRMVVLPRGDNVWLTRTTFRLVYGCFLVRLRRINNYEQADRVLAFYAPVALLI IPVVWMVLAIAGFTCMFWAVGEHPWSKAFLLSGSSMLTLGFAAVDSTVETILAFLAATVGLGIVALLIAYLPTMYGAFSK REEAVTLLEVRAGTPPSAITMIQRYQRIHNLERMPEQWAIWEQWFAELEESHTTFAALAFFRSPQPYRSWITASAAVLDS AALAVSTLDIPRQPDADLCIRAGYLALRRIADLYMIPYNATPHADDPISITRADFDQACAELIASGVPLKADRDQAWRDF AGWRVNYDQVLIELAKLVTAPPAPWTGERPLPLCFNMPRFGHKRRQLAKEPTGSM
Sequences:
>Translated_375_residues MTIVEGLINLGVFLIGLVIVAFTLFSAIRMVVLPRGDNVWLTRTTFRLVYGCFLVRLRRINNYEQADRVLAFYAPVALLI IPVVWMVLAIAGFTCMFWAVGEHPWSKAFLLSGSSMLTLGFAAVDSTVETILAFLAATVGLGIVALLIAYLPTMYGAFSK REEAVTLLEVRAGTPPSAITMIQRYQRIHNLERMPEQWAIWEQWFAELEESHTTFAALAFFRSPQPYRSWITASAAVLDS AALAVSTLDIPRQPDADLCIRAGYLALRRIADLYMIPYNATPHADDPISITRADFDQACAELIASGVPLKADRDQAWRDF AGWRVNYDQVLIELAKLVTAPPAPWTGERPLPLCFNMPRFGHKRRQLAKEPTGSM >Mature_374_residues TIVEGLINLGVFLIGLVIVAFTLFSAIRMVVLPRGDNVWLTRTTFRLVYGCFLVRLRRINNYEQADRVLAFYAPVALLII PVVWMVLAIAGFTCMFWAVGEHPWSKAFLLSGSSMLTLGFAAVDSTVETILAFLAATVGLGIVALLIAYLPTMYGAFSKR EEAVTLLEVRAGTPPSAITMIQRYQRIHNLERMPEQWAIWEQWFAELEESHTTFAALAFFRSPQPYRSWITASAAVLDSA ALAVSTLDIPRQPDADLCIRAGYLALRRIADLYMIPYNATPHADDPISITRADFDQACAELIASGVPLKADRDQAWRDFA GWRVNYDQVLIELAKLVTAPPAPWTGERPLPLCFNMPRFGHKRRQLAKEPTGSM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41885; Mature: 41754
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIVEGLINLGVFLIGLVIVAFTLFSAIRMVVLPRGDNVWLTRTTFRLVYGCFLVRLRRI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEHHHHHHHHHHHHHHHHHH NNYEQADRVLAFYAPVALLIIPVVWMVLAIAGFTCMFWAVGEHPWSKAFLLSGSSMLTLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHH FAAVDSTVETILAFLAATVGLGIVALLIAYLPTMYGAFSKREEAVTLLEVRAGTPPSAIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHH MIQRYQRIHNLERMPEQWAIWEQWFAELEESHTTFAALAFFRSPQPYRSWITASAAVLDS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH AALAVSTLDIPRQPDADLCIRAGYLALRRIADLYMIPYNATPHADDPISITRADFDQACA HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEECCCHHHHHH ELIASGVPLKADRDQAWRDFAGWRVNYDQVLIELAKLVTAPPAPWTGERPLPLCFNMPRF HHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCC GHKRRQLAKEPTGSM CHHHHHHHCCCCCCC >Mature Secondary Structure TIVEGLINLGVFLIGLVIVAFTLFSAIRMVVLPRGDNVWLTRTTFRLVYGCFLVRLRRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEHHHHHHHHHHHHHHHHHH NNYEQADRVLAFYAPVALLIIPVVWMVLAIAGFTCMFWAVGEHPWSKAFLLSGSSMLTLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHH FAAVDSTVETILAFLAATVGLGIVALLIAYLPTMYGAFSKREEAVTLLEVRAGTPPSAIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHH MIQRYQRIHNLERMPEQWAIWEQWFAELEESHTTFAALAFFRSPQPYRSWITASAAVLDS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH AALAVSTLDIPRQPDADLCIRAGYLALRRIADLYMIPYNATPHADDPISITRADFDQACA HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEECCCHHHHHH ELIASGVPLKADRDQAWRDFAGWRVNYDQVLIELAKLVTAPPAPWTGERPLPLCFNMPRF HHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCC GHKRRQLAKEPTGSM CHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA