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The map label for this gene is xylH [H]

Identifier: 159900178

GI number: 159900178

Start: 4602669

End: 4603886

Strand: Direct

Name: xylH [H]

Synonym: Haur_3661

Alternate gene names: 159900178

Gene position: 4602669-4603886 (Clockwise)

Preceding gene: 159900177

Following gene: 159900179

Centisome position: 72.52

GC content: 49.75

Gene sequence:

>1218_bases
ATGAGCGCTGAACTAAAAACCAACGAATCCAGCAAAGCGGCTGGTTTCAATTTCGCCACCGTTGTCGATTTCTTCAAAAA
TAATATGCGCGAATATGGCATGCTGGTTGCCCTTGTGATCATTGTGCTGTATTTTCAATTTCAAACCGATGGGGTGCTGC
TGCAACCACTCAATGTCACCAATGTGATTTTGCAAAATAGCTATATCGTGGTGATGGCCTTGGGGATGTTGCTGATCATC
GTGGCAGGCCATATTGACCTCTCGGTCGGCTCGGTGGCAGCCTTCGTTGGAGCGGTGGCTGGCTATATGCTGGTCGAAAA
AGATTATCCAATCATTGTTGCCTTTGCTGCTTGTATCGCCATCGGTGCAGCAATTGGCGCGTTTCAGGGCTATTGGGTGG
CCTTTCGCAAAATTCCAGCCTTTATTGTGACCCTCGCGGGCATGTTGATTTTTCGTGGCTTGACCTTGGTCATGTTAGGT
GGTACATCACTTGGCCCCTTCCCCTCAAGCTTCCGCGAAATGAGCACAGGCTTTATCGGCGACCCAATCGGCGGAGCTGA
ATCAGCTCTCCACATCACGACACTGATCGTAGGCTTAGCCTTTGCGGCAATCATCGTTTACTTAGATCTAGTCGGTCGCA
AAAATAGCCGCTCGTTCAACTTCCCAGTCATGTCAACTCCATTGTTTATCGCCAAAAATGCCTTGATTGTTGGGATTATT
CTAGCCTTCTGCTATATCCTCGCTTCCTACGAAGGCTTGCCCAATGTCTTACTAGTGTTGATCGGCTTAATCGCGCTGTA
TATGTTTGTTACCAAAAAGACTGTGATTGGGCGACGGATTTATGCCTTGGGTGGCAACGAAAAAGCCGCTAAGCTCTCTG
GTGTGCCAACCGACCGATTAACCTTCTATACCTTCATCAACATGGGGGTTTTGGCAGCCATCGGTGGGTTGATCTTCACC
GCTCGTCTGAACTCGGCCACACCCAAGGCAGGCACAGGCTTTGAGCTTGATGTAATCGCCTCAGTCTTTATCGGTGGTGC
ATCAGCCTCAGGTGGCATCGGCACAGTCTTTGGCGTGGTGATCGGGGCACTGGTGATGGGCGTGCTCAACAACGGTATGT
CGATCGCTGGGGTAAGCGTCGATTGGCAACAAGTGATCAAAGGCGCTGTGCTGTTGGTCGCAGTCTACTTCGATGTATCC
AGCAAAAATAAAGGTTAA

Upstream 100 bases:

>100_bases
ATGTGATGAATGAAGGCCAGATTGTGGGCGAAATGCCTGCTGCTGATGCCTCGCAAGAGAAAATCATGAAATGCATTATG
CAGCAGGAGGTTAACCAGCC

Downstream 100 bases:

>100_bases
TTGCAGGTAGCCAAGGCATTAGCCTCGCTAGGCTAGTGCCTTACCAATCTAAAAGGAGTTGCCATGAGTCGGCAAACATA
CGCGATCGGTGTCGATTTCG

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSAELKTNESSKAAGFNFATVVDFFKNNMREYGMLVALVIIVLYFQFQTDGVLLQPLNVTNVILQNSYIVVMALGMLLII
VAGHIDLSVGSVAAFVGAVAGYMLVEKDYPIIVAFAACIAIGAAIGAFQGYWVAFRKIPAFIVTLAGMLIFRGLTLVMLG
GTSLGPFPSSFREMSTGFIGDPIGGAESALHITTLIVGLAFAAIIVYLDLVGRKNSRSFNFPVMSTPLFIAKNALIVGII
LAFCYILASYEGLPNVLLVLIGLIALYMFVTKKTVIGRRIYALGGNEKAAKLSGVPTDRLTFYTFINMGVLAAIGGLIFT
ARLNSATPKAGTGFELDVIASVFIGGASASGGIGTVFGVVIGALVMGVLNNGMSIAGVSVDWQQVIKGAVLLVAVYFDVS
SKNKG

Sequences:

>Translated_405_residues
MSAELKTNESSKAAGFNFATVVDFFKNNMREYGMLVALVIIVLYFQFQTDGVLLQPLNVTNVILQNSYIVVMALGMLLII
VAGHIDLSVGSVAAFVGAVAGYMLVEKDYPIIVAFAACIAIGAAIGAFQGYWVAFRKIPAFIVTLAGMLIFRGLTLVMLG
GTSLGPFPSSFREMSTGFIGDPIGGAESALHITTLIVGLAFAAIIVYLDLVGRKNSRSFNFPVMSTPLFIAKNALIVGII
LAFCYILASYEGLPNVLLVLIGLIALYMFVTKKTVIGRRIYALGGNEKAAKLSGVPTDRLTFYTFINMGVLAAIGGLIFT
ARLNSATPKAGTGFELDVIASVFIGGASASGGIGTVFGVVIGALVMGVLNNGMSIAGVSVDWQQVIKGAVLLVAVYFDVS
SKNKG
>Mature_404_residues
SAELKTNESSKAAGFNFATVVDFFKNNMREYGMLVALVIIVLYFQFQTDGVLLQPLNVTNVILQNSYIVVMALGMLLIIV
AGHIDLSVGSVAAFVGAVAGYMLVEKDYPIIVAFAACIAIGAAIGAFQGYWVAFRKIPAFIVTLAGMLIFRGLTLVMLGG
TSLGPFPSSFREMSTGFIGDPIGGAESALHITTLIVGLAFAAIIVYLDLVGRKNSRSFNFPVMSTPLFIAKNALIVGIIL
AFCYILASYEGLPNVLLVLIGLIALYMFVTKKTVIGRRIYALGGNEKAAKLSGVPTDRLTFYTFINMGVLAAIGGLIFTA
RLNSATPKAGTGFELDVIASVFIGGASASGGIGTVFGVVIGALVMGVLNNGMSIAGVSVDWQQVIKGAVLLVAVYFDVSS
KNKG

Specific function: Part of the binding-protein-dependent transport system for D-xylose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4214

COG function: function code G; ABC-type xylose transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789992, Length=377, Percent_Identity=36.8700265251989, Blast_Score=235, Evalue=4e-63,
Organism=Escherichia coli, GI1790191, Length=341, Percent_Identity=36.6568914956012, Blast_Score=151, Evalue=8e-38,
Organism=Escherichia coli, GI1788896, Length=161, Percent_Identity=39.7515527950311, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI145693152, Length=151, Percent_Identity=38.4105960264901, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1790524, Length=152, Percent_Identity=44.078947368421, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI1788471, Length=386, Percent_Identity=30.3108808290155, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87082395, Length=135, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1787794, Length=144, Percent_Identity=28.4722222222222, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787793, Length=136, Percent_Identity=32.3529411764706, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 42625; Mature: 42494

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAELKTNESSKAAGFNFATVVDFFKNNMREYGMLVALVIIVLYFQFQTDGVLLQPLNVT
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHH
NVILQNSYIVVMALGMLLIIVAGHIDLSVGSVAAFVGAVAGYMLVEKDYPIIVAFAACIA
HHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHH
IGAAIGAFQGYWVAFRKIPAFIVTLAGMLIFRGLTLVMLGGTSLGPFPSSFREMSTGFIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHCCCCC
DPIGGAESALHITTLIVGLAFAAIIVYLDLVGRKNSRSFNFPVMSTPLFIAKNALIVGII
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LAFCYILASYEGLPNVLLVLIGLIALYMFVTKKTVIGRRIYALGGNEKAAKLSGVPTDRL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHCCCCCCHHH
TFYTFINMGVLAAIGGLIFTARLNSATPKAGTGFELDVIASVFIGGASASGGIGTVFGVV
HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
IGALVMGVLNNGMSIAGVSVDWQQVIKGAVLLVAVYFDVSSKNKG
HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SAELKTNESSKAAGFNFATVVDFFKNNMREYGMLVALVIIVLYFQFQTDGVLLQPLNVT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHH
NVILQNSYIVVMALGMLLIIVAGHIDLSVGSVAAFVGAVAGYMLVEKDYPIIVAFAACIA
HHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHH
IGAAIGAFQGYWVAFRKIPAFIVTLAGMLIFRGLTLVMLGGTSLGPFPSSFREMSTGFIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHCCCCC
DPIGGAESALHITTLIVGLAFAAIIVYLDLVGRKNSRSFNFPVMSTPLFIAKNALIVGII
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LAFCYILASYEGLPNVLLVLIGLIALYMFVTKKTVIGRRIYALGGNEKAAKLSGVPTDRL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHCCCCCCHHH
TFYTFINMGVLAAIGGLIFTARLNSATPKAGTGFELDVIASVFIGGASASGGIGTVFGVV
HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
IGALVMGVLNNGMSIAGVSVDWQQVIKGAVLLVAVYFDVSSKNKG
HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]