| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900154
Identifier: 159900154
GI number: 159900154
Start: 4574548
End: 4575204
Strand: Reverse
Name: 159900154
Synonym: Haur_3637
Alternate gene names: NA
Gene position: 4575204-4574548 (Counterclockwise)
Preceding gene: 159900155
Following gene: 159900153
Centisome position: 72.09
GC content: 50.23
Gene sequence:
>657_bases ATGTCACGGCTCAATCATGAGACAAATGAATGGCATTGCAAGGTCGTGTTGTTTGGCCCACCTACCCGCAATGCAGTGAA GCTAGCCGCCCAATTGGTTACAGCGATTCCATTAGCTGAACGCGAAGTAACGTGGGATACCCCGCCAGCCGAAGAACCAA CCCTCGTAGCTCGCTACCGTCCTGCAAATGCTGCCCTTGGGGATATCAAGCCTGTTTATATGTTGCATACCTTGCGTTCG GCTGGATCGACTGCCGCTGATCGCCAGCATGTGTTGCATAATACCGATGGCGTGATTTTGCTGCTTGATCTCGAAAGTGA AGATCAATCAATTTTTGCTGAGCGCGAACTCGAACGCTTTTTGAGCACCTACGGCAAAACGATTGCCTCGATGCCCGTGA TTTTGCTGGGAGCCAGCCCACTTGATGATGGTCAGCAAGCCCGTTTGAATGCTAATAGCCTCTCGTATTTTGCAGCTGAA AATGCTACAACGTTGCAACGGGCTTTGCATACGCTCACCAGTGGTCTCGAAGAAGATTCGGGCTTGGCTGGGATTGGCTT TGACCTTGATGACTTCGATAGCGACGGCAGCGCTGTTGACCTTGATGATATAGAGTTTGATGATTTACATGCCTACGACG ACGACGATCTCAAATAG
Upstream 100 bases:
>100_bases GCCAGCTTGAGTTGTGATTAAACGCTAGCGCTAATCTGCGAGACAATGCTATAATCCTTGCGACTGCCCATCGTTTTTGC AGTGGAATTTCGGAGGAGCT
Downstream 100 bases:
>100_bases AATGACGTTGCGCCCAGCAACTCTCGCCGATCGCGAGCCGATTGTAGCTTGGTGCAACACCCTCTGGAATGGTCAGCCCG ATTATATTGGCGATGTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSRLNHETNEWHCKVVLFGPPTRNAVKLAAQLVTAIPLAEREVTWDTPPAEEPTLVARYRPANAALGDIKPVYMLHTLRS AGSTAADRQHVLHNTDGVILLLDLESEDQSIFAERELERFLSTYGKTIASMPVILLGASPLDDGQQARLNANSLSYFAAE NATTLQRALHTLTSGLEEDSGLAGIGFDLDDFDSDGSAVDLDDIEFDDLHAYDDDDLK
Sequences:
>Translated_218_residues MSRLNHETNEWHCKVVLFGPPTRNAVKLAAQLVTAIPLAEREVTWDTPPAEEPTLVARYRPANAALGDIKPVYMLHTLRS AGSTAADRQHVLHNTDGVILLLDLESEDQSIFAERELERFLSTYGKTIASMPVILLGASPLDDGQQARLNANSLSYFAAE NATTLQRALHTLTSGLEEDSGLAGIGFDLDDFDSDGSAVDLDDIEFDDLHAYDDDDLK >Mature_217_residues SRLNHETNEWHCKVVLFGPPTRNAVKLAAQLVTAIPLAEREVTWDTPPAEEPTLVARYRPANAALGDIKPVYMLHTLRSA GSTAADRQHVLHNTDGVILLLDLESEDQSIFAERELERFLSTYGKTIASMPVILLGASPLDDGQQARLNANSLSYFAAEN ATTLQRALHTLTSGLEEDSGLAGIGFDLDDFDSDGSAVDLDDIEFDDLHAYDDDDLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23877; Mature: 23745
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLNHETNEWHCKVVLFGPPTRNAVKLAAQLVTAIPLAEREVTWDTPPAEEPTLVARYR CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEEEEC PANAALGDIKPVYMLHTLRSAGSTAADRQHVLHNTDGVILLLDLESEDQSIFAERELERF CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHH LSTYGKTIASMPVILLGASPLDDGQQARLNANSLSYFAAENATTLQRALHTLTSGLEEDS HHHHHHHHHHCCEEEEECCCCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCC GLAGIGFDLDDFDSDGSAVDLDDIEFDDLHAYDDDDLK CEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRLNHETNEWHCKVVLFGPPTRNAVKLAAQLVTAIPLAEREVTWDTPPAEEPTLVARYR CCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEEEEC PANAALGDIKPVYMLHTLRSAGSTAADRQHVLHNTDGVILLLDLESEDQSIFAERELERF CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHH LSTYGKTIASMPVILLGASPLDDGQQARLNANSLSYFAAENATTLQRALHTLTSGLEEDS HHHHHHHHHHCCEEEEECCCCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCC GLAGIGFDLDDFDSDGSAVDLDDIEFDDLHAYDDDDLK CEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA