| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900146
Identifier: 159900146
GI number: 159900146
Start: 4562074
End: 4562811
Strand: Direct
Name: 159900146
Synonym: Haur_3629
Alternate gene names: NA
Gene position: 4562074-4562811 (Clockwise)
Preceding gene: 159900144
Following gene: 159900147
Centisome position: 71.88
GC content: 53.12
Gene sequence:
>738_bases ATGAAATTGGTTAAACGCCTTGCGATTGGGCTAGTTTTGCTGTTAATCATAGGAGTTGTCGGCTTTGTGGTGTGGGCGAG TAATCCCGCTGCCGCCATGGCAACAGCCAACGAAGCCTTAGTTTCCGACCAAACCGTCACGGTGACAGAAACCGATTGGC TGATTTTTGAGCCAAGCGCAGCACCAACCACAGGCCTAATTTTCTATCCTGGGGCACGAGTTACGCCTGCAGCTTATGCC CCGCTGGCTCATGAATTGGCCAGCGCTGGCTACTTGGTTGTGATTGTGCCAATGCCGCTGAATATGGCAATTTTTGGCTC CGACCGCGCCGATGCGGTGCTGGCGGCTTATCCGCAGATTGAGCATTGGGCGCTTGGGGGGCATTCGTTGGGTGGTGCCA TGGCCGCGAAATACACCTATGAACATCCCGATACCATCGATGGTCTGATTCTGCTGGCGGCCTACCCGACGGCCTCGAAC AGTTTGGCCGAGCGTGAGCTAGCTAGCAGCATGATTTATGCAAGCAACGATGGATTGGCAACATTAGTTGATATTGAAGC AGCCCGACCACTGATGCCAAGCACCACTCGTTGGGTTGAGATTCAGGGTGGGAATCATGCCCAATTTGGCTGGTATGGTG AGCAATCGGGCGATTTGCCAGCCACCATTAGCCATGCAGAGCAACAACAGCAAACCCTAGATGCAGCGCTAGACGTATTG CAACAACTTGATCAATAA
Upstream 100 bases:
>100_bases ACTCTTAGGTTCTTTGCTCTATGTTCTTTGTTCTTGTGATTCATCCTGCATGCTGGGCGTTGCGTAGAATATAACTGAAA TACATGCTAGGAGTACGCTG
Downstream 100 bases:
>100_bases TGCTGTGATAGATTGATCAAGTTGGCTGATTACATGGATGAACGTTTTCGTTGGTGGCCGACCATTCGGCGCTATCGACT GATATTAATGCTTTTGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKLVKRLAIGLVLLLIIGVVGFVVWASNPAAAMATANEALVSDQTVTVTETDWLIFEPSAAPTTGLIFYPGARVTPAAYA PLAHELASAGYLVVIVPMPLNMAIFGSDRADAVLAAYPQIEHWALGGHSLGGAMAAKYTYEHPDTIDGLILLAAYPTASN SLAERELASSMIYASNDGLATLVDIEAARPLMPSTTRWVEIQGGNHAQFGWYGEQSGDLPATISHAEQQQQTLDAALDVL QQLDQ
Sequences:
>Translated_245_residues MKLVKRLAIGLVLLLIIGVVGFVVWASNPAAAMATANEALVSDQTVTVTETDWLIFEPSAAPTTGLIFYPGARVTPAAYA PLAHELASAGYLVVIVPMPLNMAIFGSDRADAVLAAYPQIEHWALGGHSLGGAMAAKYTYEHPDTIDGLILLAAYPTASN SLAERELASSMIYASNDGLATLVDIEAARPLMPSTTRWVEIQGGNHAQFGWYGEQSGDLPATISHAEQQQQTLDAALDVL QQLDQ >Mature_245_residues MKLVKRLAIGLVLLLIIGVVGFVVWASNPAAAMATANEALVSDQTVTVTETDWLIFEPSAAPTTGLIFYPGARVTPAAYA PLAHELASAGYLVVIVPMPLNMAIFGSDRADAVLAAYPQIEHWALGGHSLGGAMAAKYTYEHPDTIDGLILLAAYPTASN SLAERELASSMIYASNDGLATLVDIEAARPLMPSTTRWVEIQGGNHAQFGWYGEQSGDLPATISHAEQQQQTLDAALDVL QQLDQ
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25987; Mature: 25987
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVKRLAIGLVLLLIIGVVGFVVWASNPAAAMATANEALVSDQTVTVTETDWLIFEPSA CHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHCCCHHHCCCCEEEEEECCEEEECCCC APTTGLIFYPGARVTPAAYAPLAHELASAGYLVVIVPMPLNMAIFGSDRADAVLAAYPQI CCCCCEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCCCEEEEECCCC EHWALGGHSLGGAMAAKYTYEHPDTIDGLILLAAYPTASNSLAERELASSMIYASNDGLA EEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHEEEECCCCCE TLVDIEAARPLMPSTTRWVEIQGGNHAQFGWYGEQSGDLPATISHAEQQQQTLDAALDVL EEEEECCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHH QQLDQ HHHCC >Mature Secondary Structure MKLVKRLAIGLVLLLIIGVVGFVVWASNPAAAMATANEALVSDQTVTVTETDWLIFEPSA CHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHCCCHHHCCCCEEEEEECCEEEECCCC APTTGLIFYPGARVTPAAYAPLAHELASAGYLVVIVPMPLNMAIFGSDRADAVLAAYPQI CCCCCEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCCCEEEEECCCC EHWALGGHSLGGAMAAKYTYEHPDTIDGLILLAAYPTASNSLAERELASSMIYASNDGLA EEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHEEEECCCCCE TLVDIEAARPLMPSTTRWVEIQGGNHAQFGWYGEQSGDLPATISHAEQQQQTLDAALDVL EEEEECCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHH QQLDQ HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA