| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is catD [H]
Identifier: 159900122
GI number: 159900122
Start: 4534441
End: 4535295
Strand: Direct
Name: catD [H]
Synonym: Haur_3605
Alternate gene names: 159900122
Gene position: 4534441-4535295 (Clockwise)
Preceding gene: 159900121
Following gene: 159900123
Centisome position: 71.45
GC content: 51.58
Gene sequence:
>855_bases ATGCCCCAGGCAGCAATCAATGGCATCACGCTTAATTATGAAGTCGCTGGGCAAGGCGCACCCTTGCTCTTGATTATGGG ATTGGGCGGCACGACCGATGGCTGGCGCAAAGAATTGCCGTTTTTAACCAAACATTTTCAGGTGATCTATTACGATAATC GTGGGGTTGGTAAAACCACCGCTCCCACCGATTTCACCGCCTATAGCATGGAGCATTTTGCTGCCGATGCGATTGGCTTA TTGGATCATCTGGGGATTGAGCGGGCGCACGTTTGGGGCGTTTCGATGGGTGGAATGATCGCCCAACATGTGGCCTTGAA TTACCCTGAGCGGGTGCAAGGTTTGGTTTTGGGCTGTACGCTACCGCATTACGCCAACGATCCCGCCAATATTCCTGCCT TGCCCGATGAATTTCATGCTGAAGCTAGCAACCTTGCGCCCGAAGCCTGGGTTTTAGAGTTGATGCTGAGTGGCACGCAA AAAACTGCCCACGAAGTTATGCAAGATAGTGTACGCTTTAATTTTGCTCCAGCCTTTGTCGAAGCTCATCCCGAAGTGAT CGAGGAATATATTGAGGTGGGCATGCAAAATCATGGGCCAGCTCATGGCTTTATGGGCCAATGGAGCGCAATTATGAACC ACAGCACGATCGAGCGTCTGCCTAAACTCCAGCATCCTACGCTGGTGCAGCATGGCGATGCCGATGTTTTGGTGCCAATT GGCAACGGGCGGTTGCTGGCGCAGATCATTCCCAATGCTGAATTTCAATTAATTCCTGGCAGCGGCCATTGCTATTTTAT CGAGCAGCCCGAGCTAGCCAGTCAAGGTGTGCAGGCCTTTCTGCAAAGCCTCTAA
Upstream 100 bases:
>100_bases TGCGAGCTTTATGACCGCCGCTGAGTTTGGCTTGTTGGCATGGCTGCGGATCATTATGGAACGTTCAGTCGCTTAGTAGA TTTTTTGGAGGTACTTTGGC
Downstream 100 bases:
>100_bases GTTGGGTCGATGTTTCAGCAGGCTGATTCAACAGCCTGCTGTTTTTTTAGCCAAGGAAGCTGCATGCATCCAAAATATCA AGCCTGGTTCGCCGGAATTA
Product: alpha/beta hydrolase fold-domain containing protein
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MPQAAINGITLNYEVAGQGAPLLLIMGLGGTTDGWRKELPFLTKHFQVIYYDNRGVGKTTAPTDFTAYSMEHFAADAIGL LDHLGIERAHVWGVSMGGMIAQHVALNYPERVQGLVLGCTLPHYANDPANIPALPDEFHAEASNLAPEAWVLELMLSGTQ KTAHEVMQDSVRFNFAPAFVEAHPEVIEEYIEVGMQNHGPAHGFMGQWSAIMNHSTIERLPKLQHPTLVQHGDADVLVPI GNGRLLAQIIPNAEFQLIPGSGHCYFIEQPELASQGVQAFLQSL
Sequences:
>Translated_284_residues MPQAAINGITLNYEVAGQGAPLLLIMGLGGTTDGWRKELPFLTKHFQVIYYDNRGVGKTTAPTDFTAYSMEHFAADAIGL LDHLGIERAHVWGVSMGGMIAQHVALNYPERVQGLVLGCTLPHYANDPANIPALPDEFHAEASNLAPEAWVLELMLSGTQ KTAHEVMQDSVRFNFAPAFVEAHPEVIEEYIEVGMQNHGPAHGFMGQWSAIMNHSTIERLPKLQHPTLVQHGDADVLVPI GNGRLLAQIIPNAEFQLIPGSGHCYFIEQPELASQGVQAFLQSL >Mature_283_residues PQAAINGITLNYEVAGQGAPLLLIMGLGGTTDGWRKELPFLTKHFQVIYYDNRGVGKTTAPTDFTAYSMEHFAADAIGLL DHLGIERAHVWGVSMGGMIAQHVALNYPERVQGLVLGCTLPHYANDPANIPALPDEFHAEASNLAPEAWVLELMLSGTQK TAHEVMQDSVRFNFAPAFVEAHPEVIEEYIEVGMQNHGPAHGFMGQWSAIMNHSTIERLPKLQHPTLVQHGDADVLVPIG NGRLLAQIIPNAEFQLIPGSGHCYFIEQPELASQGVQAFLQSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI218777840, Length=284, Percent_Identity=23.5915492957746, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI13376164, Length=284, Percent_Identity=23.5915492957746, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 30989; Mature: 30858
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQAAINGITLNYEVAGQGAPLLLIMGLGGTTDGWRKELPFLTKHFQVIYYDNRGVGKTT CCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHCCHHEECEEEEEECCCCCCCCC APTDFTAYSMEHFAADAIGLLDHLGIERAHVWGVSMGGMIAQHVALNYPERVQGLVLGCT CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCHHHCEEEEEEE LPHYANDPANIPALPDEFHAEASNLAPEAWVLELMLSGTQKTAHEVMQDSVRFNFAPAFV CCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHH EAHPEVIEEYIEVGMQNHGPAHGFMGQWSAIMNHSTIERLPKLQHPTLVQHGDADVLVPI HCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEC GNGRLLAQIIPNAEFQLIPGSGHCYFIEQPELASQGVQAFLQSL CCCEEEEEECCCCCEEEECCCCCEEEEECCHHHHHHHHHHHHHC >Mature Secondary Structure PQAAINGITLNYEVAGQGAPLLLIMGLGGTTDGWRKELPFLTKHFQVIYYDNRGVGKTT CCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHCCHHEECEEEEEECCCCCCCCC APTDFTAYSMEHFAADAIGLLDHLGIERAHVWGVSMGGMIAQHVALNYPERVQGLVLGCT CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCHHHCEEEEEEE LPHYANDPANIPALPDEFHAEASNLAPEAWVLELMLSGTQKTAHEVMQDSVRFNFAPAFV CCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHH EAHPEVIEEYIEVGMQNHGPAHGFMGQWSAIMNHSTIERLPKLQHPTLVQHGDADVLVPI HCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEC GNGRLLAQIIPNAEFQLIPGSGHCYFIEQPELASQGVQAFLQSL CCCEEEEEECCCCCEEEECCCCCEEEEECCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]