Click here to switch to the map view.

The map label for this gene is 159900096

Identifier: 159900096

GI number: 159900096

Start: 4499827

End: 4501332

Strand: Direct

Name: 159900096

Synonym: Haur_3579

Alternate gene names: NA

Gene position: 4499827-4501332 (Clockwise)

Preceding gene: 159900095

Following gene: 159900097

Centisome position: 70.9

GC content: 49.54

Gene sequence:

>1506_bases
ATGCTGGCCAACACACCGCAAGAAGAGCCAACCAGCCAACCAGATGTTTTTAACAGCAAATGGATGAAATTTGCCTTTGC
TTTTTTAGCGATCGCTGGGGGCGCTGGGGTTGCCGCCGCCTTGGCATTTTTCGATAACCCCTTGAAATTAGTGCTGCTGT
TTGGTGGCGCTGGTGCAGCCATGGTCACAATGCGCAATAGCGAATGGGGCTTGCTGGCACTGGTGTTCATGAGCTACACC
CGTTTTTCCGATGTGATGGTGCGCAACGGAGCGCCCTCAACCGCCCAACCATTTTTAGCGTTGCTCTTTTTAATTATTTT
CTTGCGCTGGGCACTCTACAACCAAAAACCCGAGCCTTGGCTCAAGCCCGCCGCCTGGATCTTTGTCTATGGCATGGTTG
GGGTCGCCACATTTCTCTATGCTGATGATGTCATGCGAGTTAAGAATGGGGTCATCACCTACTTCAAAGATGCGATTATC
GTGATCGTGGTGGTGATGATGATGCGTTCGCCCAAGATGCTGCATCGTTCGATGTGGGCGCTCTTGTTCGCTGGCATTTT
TATGGCTTCGATTACCACCTGGCAGCAATTAACTGGTACGTTCGAGAACGATTATTTGGGCTTTGCCAAAGCTGGCAAAA
TGCAAATCGTCTCAGGCGTTGAGGATGATTATCGGATTGCTGGGCCAATCGGCGACCCTAATTTCTATTCACAAGTGCTC
TTGACCCTAATTCCACTGGGCATGGATCGCATGTGGAATGAGAAGAACAAAAAATTACGCTGGTTTGCAATTTGGCAATT
GAGCGTTTGTATGGCCTCAATTTTCTTCTCGTTCAGTCGTGGGGCATTTCTCTCGCTCTCGATTGCCAGCTTAATTATGT
TTGTGCGCCGACCACCCAAGCCGCTTTCGGTGATCATTATCATCGCTTTGGGTTTTGTAATCATCCCGACCTTGCCAGCT
TCGTATATCGCGCGGCTCGAAACGATTCCCGAGGCAATTCCCGGCTTAGCTCAAGAAGATGTGCGCAACGAGGCTTCGTT
CCGTGGCCGTTCGAGCGCCCAACAAGCGGGTTTACGCATGTTCTGGGCTAACCCAGTTTTTGGCTTAGGTGTGGGCAATT
TTGGCAATCACTATCAAGAATATGCCCGTGATCTAGGACTTGATAACAGCCGTTGGGACCAAGCGCCGCACAACATGTAC
CTTGAAATTCTGACCGAAAAAGGCTTATTTGGGCTTTCGGTCTTTAGCGCAATGATGTGGGTGCTGTTCCGCGATATGAA
CCGAGCACGTAAAAAGTTTCGCGAAATCAATATGGGCGATTTCGATGGTCTGATCTTTGGTTTCCAGGCTGGGTTGGTTG
GCTATATGTTTGCCGGGATCTTCCTGCAACTATCCTACCCACGCTTTTTCTGGATTTTGATCGCCATCGCCTATGCAATT
CCCAATGTTGCCAATAAAGCTTATGAAGAGTATCGCGAGGCGCTACCAAATGGCGAAACAGCCTGA

Upstream 100 bases:

>100_bases
GTGGCGAAAAGAATGTGCTCTTCTCAGCCGTTGAACAACCTGCCTAAATTAAACCAACCTGCACGGCATGCAATTCATGC
CGTGCAGCCATGAGGTCGTT

Downstream 100 bases:

>100_bases
AACGATTGTCCAGAGTGCGGCTCGTAATACATTATGGTCGTATGCCGCCACCTATGGCGGCAAAATTCTGATCTTTATCA
CCACGGTGATTCTGGCTTAT

Product: O-antigen polymerase

Products: NA

Alternate protein names: Wzy Family Polymerase; Polysaccharide Deacetylase

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MLANTPQEEPTSQPDVFNSKWMKFAFAFLAIAGGAGVAAALAFFDNPLKLVLLFGGAGAAMVTMRNSEWGLLALVFMSYT
RFSDVMVRNGAPSTAQPFLALLFLIIFLRWALYNQKPEPWLKPAAWIFVYGMVGVATFLYADDVMRVKNGVITYFKDAII
VIVVVMMMRSPKMLHRSMWALLFAGIFMASITTWQQLTGTFENDYLGFAKAGKMQIVSGVEDDYRIAGPIGDPNFYSQVL
LTLIPLGMDRMWNEKNKKLRWFAIWQLSVCMASIFFSFSRGAFLSLSIASLIMFVRRPPKPLSVIIIIALGFVIIPTLPA
SYIARLETIPEAIPGLAQEDVRNEASFRGRSSAQQAGLRMFWANPVFGLGVGNFGNHYQEYARDLGLDNSRWDQAPHNMY
LEILTEKGLFGLSVFSAMMWVLFRDMNRARKKFREINMGDFDGLIFGFQAGLVGYMFAGIFLQLSYPRFFWILIAIAYAI
PNVANKAYEEYREALPNGETA

Sequences:

>Translated_501_residues
MLANTPQEEPTSQPDVFNSKWMKFAFAFLAIAGGAGVAAALAFFDNPLKLVLLFGGAGAAMVTMRNSEWGLLALVFMSYT
RFSDVMVRNGAPSTAQPFLALLFLIIFLRWALYNQKPEPWLKPAAWIFVYGMVGVATFLYADDVMRVKNGVITYFKDAII
VIVVVMMMRSPKMLHRSMWALLFAGIFMASITTWQQLTGTFENDYLGFAKAGKMQIVSGVEDDYRIAGPIGDPNFYSQVL
LTLIPLGMDRMWNEKNKKLRWFAIWQLSVCMASIFFSFSRGAFLSLSIASLIMFVRRPPKPLSVIIIIALGFVIIPTLPA
SYIARLETIPEAIPGLAQEDVRNEASFRGRSSAQQAGLRMFWANPVFGLGVGNFGNHYQEYARDLGLDNSRWDQAPHNMY
LEILTEKGLFGLSVFSAMMWVLFRDMNRARKKFREINMGDFDGLIFGFQAGLVGYMFAGIFLQLSYPRFFWILIAIAYAI
PNVANKAYEEYREALPNGETA
>Mature_501_residues
MLANTPQEEPTSQPDVFNSKWMKFAFAFLAIAGGAGVAAALAFFDNPLKLVLLFGGAGAAMVTMRNSEWGLLALVFMSYT
RFSDVMVRNGAPSTAQPFLALLFLIIFLRWALYNQKPEPWLKPAAWIFVYGMVGVATFLYADDVMRVKNGVITYFKDAII
VIVVVMMMRSPKMLHRSMWALLFAGIFMASITTWQQLTGTFENDYLGFAKAGKMQIVSGVEDDYRIAGPIGDPNFYSQVL
LTLIPLGMDRMWNEKNKKLRWFAIWQLSVCMASIFFSFSRGAFLSLSIASLIMFVRRPPKPLSVIIIIALGFVIIPTLPA
SYIARLETIPEAIPGLAQEDVRNEASFRGRSSAQQAGLRMFWANPVFGLGVGNFGNHYQEYARDLGLDNSRWDQAPHNMY
LEILTEKGLFGLSVFSAMMWVLFRDMNRARKKFREINMGDFDGLIFGFQAGLVGYMFAGIFLQLSYPRFFWILIAIAYAI
PNVANKAYEEYREALPNGETA

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56352; Mature: 56352

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLANTPQEEPTSQPDVFNSKWMKFAFAFLAIAGGAGVAAALAFFDNPLKLVLLFGGAGAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCEE
MVTMRNSEWGLLALVFMSYTRFSDVMVRNGAPSTAQPFLALLFLIIFLRWALYNQKPEPW
EEEEECCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
LKPAAWIFVYGMVGVATFLYADDVMRVKNGVITYFKDAIIVIVVVMMMRSPKMLHRSMWA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LLFAGIFMASITTWQQLTGTFENDYLGFAKAGKMQIVSGVEDDYRIAGPIGDPNFYSQVL
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCEECCCCCCCEEECCCCCCHHHHHHH
LTLIPLGMDRMWNEKNKKLRWFAIWQLSVCMASIFFSFSRGAFLSLSIASLIMFVRRPPK
HHHHHCCHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
PLSVIIIIALGFVIIPTLPASYIARLETIPEAIPGLAQEDVRNEASFRGRSSAQQAGLRM
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHCCCEE
FWANPVFGLGVGNFGNHYQEYARDLGLDNSRWDQAPHNMYLEILTEKGLFGLSVFSAMMW
EECCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
VLFRDMNRARKKFREINMGDFDGLIFGFQAGLVGYMFAGIFLQLSYPRFFWILIAIAYAI
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
PNVANKAYEEYREALPNGETA
CHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLANTPQEEPTSQPDVFNSKWMKFAFAFLAIAGGAGVAAALAFFDNPLKLVLLFGGAGAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCEE
MVTMRNSEWGLLALVFMSYTRFSDVMVRNGAPSTAQPFLALLFLIIFLRWALYNQKPEPW
EEEEECCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
LKPAAWIFVYGMVGVATFLYADDVMRVKNGVITYFKDAIIVIVVVMMMRSPKMLHRSMWA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LLFAGIFMASITTWQQLTGTFENDYLGFAKAGKMQIVSGVEDDYRIAGPIGDPNFYSQVL
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCEECCCCCCCEEECCCCCCHHHHHHH
LTLIPLGMDRMWNEKNKKLRWFAIWQLSVCMASIFFSFSRGAFLSLSIASLIMFVRRPPK
HHHHHCCHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
PLSVIIIIALGFVIIPTLPASYIARLETIPEAIPGLAQEDVRNEASFRGRSSAQQAGLRM
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHCCCEE
FWANPVFGLGVGNFGNHYQEYARDLGLDNSRWDQAPHNMYLEILTEKGLFGLSVFSAMMW
EECCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
VLFRDMNRARKKFREINMGDFDGLIFGFQAGLVGYMFAGIFLQLSYPRFFWILIAIAYAI
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
PNVANKAYEEYREALPNGETA
CHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA