Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900071

Identifier: 159900071

GI number: 159900071

Start: 4470437

End: 4471396

Strand: Reverse

Name: 159900071

Synonym: Haur_3554

Alternate gene names: NA

Gene position: 4471396-4470437 (Counterclockwise)

Preceding gene: 159900072

Following gene: 159900070

Centisome position: 70.45

GC content: 51.77

Gene sequence:

>960_bases
ATGATCAAACGTGGCTTGATCTATTTGGCGTGGCTGGGCGTTGTGCCATGCAGTTTGTGGTCGCTTTTACGCTGGACTGC
GCTGGCAACTACACCGCAAGGTATGGTATTGCTGGTGTTTGATGCCTGGGTGTATGCCAGTTTATTGCCGATTGCGCTGC
TGGCGGTTAGTTTGCGTCGCAATTATTTGCTGGGCGTGCTCGGCTTGAATATGCTGGTAGTTTTGGGCTTATATGGCGGG
CGTTGGCTACCCCAATCAGCGAATTCGACCCCCCAAGATTTGCGGATTATGACCTGGAATGTGTTTTACAATACCCAAGA
TATTGCTGGCTTGGCGGCGACAATTCGTCAGCAACAGCCGGATATTGTAGTTTTGCAGGAATATAATTTTCAGCTTGACC
CGCAACTCCCCGAAGCCTTGGAAGATTTGTACCCTTATGCCGCGCTTGATCCCCATTCGGGCGCTGGTGGTTTGGCGACG
CTTAGCCGCTGGCCGCTGCGCGAGTTGGCTCCGGTTGCGCGTGGTGTTGATAGTTGTGGCTGCCAATATTTGGAGATTGC
CACTCCAAACGGCCCAACCCGCCTGATCAACACCCATCCGCATATTCCGCTGGCCAGTTTCAAGGGCATTTATACCAAAA
CCCAGCAAGACCCAACCTTCGATCATTTGCTGAAATTGATTGCTGACCAAAGCCAACCCTTAATTTTGGCAGGCGATTTG
AATACGACTGAACGCCAGCCCAATTATTTACGTTTACGTCAACAGCTTGGCGATGCCTACCAACAACAAGGCTGGGGTTT
GGGCTATACCTTTCCGAGCAATGGCGCTATTCCCAAAGCGGTGCGTTTGGATTATATTATGCCCAACGCCCATTGGCAGC
CCTTGCGGGCTTGGAATGGCACGGCTAATTTGTCGGATCACGGCTTTGTGGTCGCCGATTTGCAGCGTTTAGCCGAATAG

Upstream 100 bases:

>100_bases
TTTAGTTTGCAGCATGATGAATTTTTGGTTGGTCGTGATGATTAATTGATAATTTGACGATCAATGAACCTCAAGCTTGT
AGAGTAAGGGAGAATTCGTG

Downstream 100 bases:

>100_bases
TTTGAGGGTTAAGACGTATGACGGTTTATAAGTCTGCTGCTACAAAATATGCAGTTCCGTTTGTGGTTATTTTAGTTGTG
GCAACAGTTATCCTTGTCAG

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: Integral Membrane Protein; Endonuclease/Exonuclease/Phosphatase Family

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MIKRGLIYLAWLGVVPCSLWSLLRWTALATTPQGMVLLVFDAWVYASLLPIALLAVSLRRNYLLGVLGLNMLVVLGLYGG
RWLPQSANSTPQDLRIMTWNVFYNTQDIAGLAATIRQQQPDIVVLQEYNFQLDPQLPEALEDLYPYAALDPHSGAGGLAT
LSRWPLRELAPVARGVDSCGCQYLEIATPNGPTRLINTHPHIPLASFKGIYTKTQQDPTFDHLLKLIADQSQPLILAGDL
NTTERQPNYLRLRQQLGDAYQQQGWGLGYTFPSNGAIPKAVRLDYIMPNAHWQPLRAWNGTANLSDHGFVVADLQRLAE

Sequences:

>Translated_319_residues
MIKRGLIYLAWLGVVPCSLWSLLRWTALATTPQGMVLLVFDAWVYASLLPIALLAVSLRRNYLLGVLGLNMLVVLGLYGG
RWLPQSANSTPQDLRIMTWNVFYNTQDIAGLAATIRQQQPDIVVLQEYNFQLDPQLPEALEDLYPYAALDPHSGAGGLAT
LSRWPLRELAPVARGVDSCGCQYLEIATPNGPTRLINTHPHIPLASFKGIYTKTQQDPTFDHLLKLIADQSQPLILAGDL
NTTERQPNYLRLRQQLGDAYQQQGWGLGYTFPSNGAIPKAVRLDYIMPNAHWQPLRAWNGTANLSDHGFVVADLQRLAE
>Mature_319_residues
MIKRGLIYLAWLGVVPCSLWSLLRWTALATTPQGMVLLVFDAWVYASLLPIALLAVSLRRNYLLGVLGLNMLVVLGLYGG
RWLPQSANSTPQDLRIMTWNVFYNTQDIAGLAATIRQQQPDIVVLQEYNFQLDPQLPEALEDLYPYAALDPHSGAGGLAT
LSRWPLRELAPVARGVDSCGCQYLEIATPNGPTRLINTHPHIPLASFKGIYTKTQQDPTFDHLLKLIADQSQPLILAGDL
NTTERQPNYLRLRQQLGDAYQQQGWGLGYTFPSNGAIPKAVRLDYIMPNAHWQPLRAWNGTANLSDHGFVVADLQRLAE

Specific function: Unknown

COG id: COG3021

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35523; Mature: 35523

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRGLIYLAWLGVVPCSLWSLLRWTALATTPQGMVLLVFDAWVYASLLPIALLAVSLRR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
NYLLGVLGLNMLVVLGLYGGRWLPQSANSTPQDLRIMTWNVFYNTQDIAGLAATIRQQQP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHCCC
DIVVLQEYNFQLDPQLPEALEDLYPYAALDPHSGAGGLATLSRWPLRELAPVARGVDSCG
CEEEEEECCCEECCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCHHHCC
CQYLEIATPNGPTRLINTHPHIPLASFKGIYTKTQQDPTFDHLLKLIADQSQPLILAGDL
CEEEEEECCCCCEEEECCCCCCCHHHCCCCEECCCCCCCHHHHHHHHHCCCCCEEEECCC
NTTERQPNYLRLRQQLGDAYQQQGWGLGYTFPSNGAIPKAVRLDYIMPNAHWQPLRAWNG
CCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCHHHCCC
TANLSDHGFVVADLQRLAE
CCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MIKRGLIYLAWLGVVPCSLWSLLRWTALATTPQGMVLLVFDAWVYASLLPIALLAVSLRR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
NYLLGVLGLNMLVVLGLYGGRWLPQSANSTPQDLRIMTWNVFYNTQDIAGLAATIRQQQP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHCCC
DIVVLQEYNFQLDPQLPEALEDLYPYAALDPHSGAGGLATLSRWPLRELAPVARGVDSCG
CEEEEEECCCEECCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCHHHCC
CQYLEIATPNGPTRLINTHPHIPLASFKGIYTKTQQDPTFDHLLKLIADQSQPLILAGDL
CEEEEEECCCCCEEEECCCCCCCHHHCCCCEECCCCCCCHHHHHHHHHCCCCCEEEECCC
NTTERQPNYLRLRQQLGDAYQQQGWGLGYTFPSNGAIPKAVRLDYIMPNAHWQPLRAWNG
CCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCHHHCCC
TANLSDHGFVVADLQRLAE
CCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA