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The map label for this gene is scpA [H]

Identifier: 159900010

GI number: 159900010

Start: 4399402

End: 4400175

Strand: Reverse

Name: scpA [H]

Synonym: Haur_3493

Alternate gene names: 159900010

Gene position: 4400175-4399402 (Counterclockwise)

Preceding gene: 159900011

Following gene: 159900009

Centisome position: 69.33

GC content: 52.97

Gene sequence:

>774_bases
ATGCCCTTAGCAACCCATCACCCCTATAATCTGCAATTGCCCGAATTTGCTGGCCCTTTGGATTTGTTGTTGCGCTTGAT
TGAGCGTGAAGAATTGGCGATCACGGCAATTTCGTTGGCAGCGGTTGCCGATCAATATCTGGCCCATGTGCGAGCCATTC
CCGACCCCGACCCTTTGACCGTGGCCGATTTTCTTGCCTTGGCGGCCCAATTATTGTTGATTAAATCGCGGGCTTTGCTG
CCTCGACGCGAGCCACCACCCGCCCCGCCTGAAGAAGATGTGGCTGAGCAACTGGCCCAGCGTTTGCGCGAATATCAACA
ATTTAAACAAGCTGCAACCCAATTGCGCGAATGGGAAAGCGCTGGTTTGCGCGTGTGGGAGCGGGTTGCGCTGCCACCCC
AGCCCGATTTACCAGCGCCCCAAATTGCAACCCATAAATTAAGTGCCTTGGTTAATGCCCTCTCGCGGCGTTTGAGCCTG
ATCGAGCGTGAAACTCCACCAATTGCCATCCCCAAGGCCAAAGTTATTACAATTGCCGAAATGGCCGAGCTGATTGGCGA
ACGTTTGTTGCGCCAACGCTATGTCGCCTTCGACGATCTGCTGAGCCTCGCGACGACTCGTAGCGAAGTGATTGTGGCCC
TTTGGACGATTTTAGAGCTCGCCAAACGTGAAATTATTAATGTTGAACAGGATGATTTGTTTGAATTGATCAATCTCTCG
CGCGGGGAGCGCTTCGGCGAAACACTGACTGAACAGATGAAGGATGAGGGATGA

Upstream 100 bases:

>100_bases
GCTGGCGGTTGTTCATACGATAAACTATTACATCTCTCTTCTATAATGGGCGATATGCGATGATTTCATCCCTCATCCTT
CATCCCTCATCAATACGATT

Downstream 100 bases:

>100_bases
GGGTATACTATTCCTAATTCCCCGCAGCAATTGATTGAAGGAATGAAATCATAATGCACATCGAAATTCTCTACCGCGAC
GAGCAAATCCTGGTGATCAA

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MPLATHHPYNLQLPEFAGPLDLLLRLIEREELAITAISLAAVADQYLAHVRAIPDPDPLTVADFLALAAQLLLIKSRALL
PRREPPPAPPEEDVAEQLAQRLREYQQFKQAATQLREWESAGLRVWERVALPPQPDLPAPQIATHKLSALVNALSRRLSL
IERETPPIAIPKAKVITIAEMAELIGERLLRQRYVAFDDLLSLATTRSEVIVALWTILELAKREIINVEQDDLFELINLS
RGERFGETLTEQMKDEG

Sequences:

>Translated_257_residues
MPLATHHPYNLQLPEFAGPLDLLLRLIEREELAITAISLAAVADQYLAHVRAIPDPDPLTVADFLALAAQLLLIKSRALL
PRREPPPAPPEEDVAEQLAQRLREYQQFKQAATQLREWESAGLRVWERVALPPQPDLPAPQIATHKLSALVNALSRRLSL
IERETPPIAIPKAKVITIAEMAELIGERLLRQRYVAFDDLLSLATTRSEVIVALWTILELAKREIINVEQDDLFELINLS
RGERFGETLTEQMKDEG
>Mature_256_residues
PLATHHPYNLQLPEFAGPLDLLLRLIEREELAITAISLAAVADQYLAHVRAIPDPDPLTVADFLALAAQLLLIKSRALLP
RREPPPAPPEEDVAEQLAQRLREYQQFKQAATQLREWESAGLRVWERVALPPQPDLPAPQIATHKLSALVNALSRRLSLI
ERETPPIAIPKAKVITIAEMAELIGERLLRQRYVAFDDLLSLATTRSEVIVALWTILELAKREIINVEQDDLFELINLSR
GERFGETLTEQMKDEG

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 28924; Mature: 28793

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLATHHPYNLQLPEFAGPLDLLLRLIEREELAITAISLAAVADQYLAHVRAIPDPDPLT
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VADFLALAAQLLLIKSRALLPRREPPPAPPEEDVAEQLAQRLREYQQFKQAATQLREWES
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLRVWERVALPPQPDLPAPQIATHKLSALVNALSRRLSLIERETPPIAIPKAKVITIAE
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
MAELIGERLLRQRYVAFDDLLSLATTRSEVIVALWTILELAKREIINVEQDDLFELINLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RGERFGETLTEQMKDEG
CCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLATHHPYNLQLPEFAGPLDLLLRLIEREELAITAISLAAVADQYLAHVRAIPDPDPLT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VADFLALAAQLLLIKSRALLPRREPPPAPPEEDVAEQLAQRLREYQQFKQAATQLREWES
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLRVWERVALPPQPDLPAPQIATHKLSALVNALSRRLSLIERETPPIAIPKAKVITIAE
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
MAELIGERLLRQRYVAFDDLLSLATTRSEVIVALWTILELAKREIINVEQDDLFELINLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RGERFGETLTEQMKDEG
CCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA