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The map label for this gene is 159900007

Identifier: 159900007

GI number: 159900007

Start: 4396060

End: 4396509

Strand: Reverse

Name: 159900007

Synonym: Haur_3490

Alternate gene names: NA

Gene position: 4396509-4396060 (Counterclockwise)

Preceding gene: 159900008

Following gene: 159900003

Centisome position: 69.27

GC content: 53.56

Gene sequence:

>450_bases
ATGAGCGAACCAAAAATTCCTTTCAAGGCCAAAATGTGGTTTGCCTGGGGCCAAAGTTGTACCTATTGGGGCAATCGCAC
GCTTTCCAAGCAAATGTATCGCTGGGCGTTCAATGCCTATACCCGTGCTCAAACCTATGCACCGTGGTGGGGCATGCCCG
TCTTGCGGCGGGCGGTAATTCGTGGGCGTGAGCTTGATGATTATGCTGGAGCCGTGCGCGATTTTGGTGATCTGATCAAG
CTTGATCCTGCGTGGGCCGAGCCATATTTGCAACGTGGCATTTTGCATAGCTTTCATGGCTTGCATGCGGCGGCGCGGGC
AATTGCCGATTTTGACCAATTTTTGAAGTTGGCTCCAGCGACCCATAGTTGGCGCACTGATGCCGAGCGTTTGACCGAGC
GTTTACGCGACGAATTGCAAGAACGAGGCTGGAGCGAACAAACCGAGTAG

Upstream 100 bases:

>100_bases
TGGCGGGGGTTGGCTTGCACGTGCTGGAACAATGGAACATTGATGATAGTCGGCCAAATTGCCCGCCATGGGTTAAAACG
ATTGCGCGAAAGGAGCCTGC

Downstream 100 bases:

>100_bases
CTCCAGCCTCGTTCGGGAGTTTAACTTTGAGGAATAGTGGTTTTGAGCCAAGCCGCTAGGTTGCTGTAATCGCGATAGTG
TTGGGCTTGCCAACCATGGC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSEPKIPFKAKMWFAWGQSCTYWGNRTLSKQMYRWAFNAYTRAQTYAPWWGMPVLRRAVIRGRELDDYAGAVRDFGDLIK
LDPAWAEPYLQRGILHSFHGLHAAARAIADFDQFLKLAPATHSWRTDAERLTERLRDELQERGWSEQTE

Sequences:

>Translated_149_residues
MSEPKIPFKAKMWFAWGQSCTYWGNRTLSKQMYRWAFNAYTRAQTYAPWWGMPVLRRAVIRGRELDDYAGAVRDFGDLIK
LDPAWAEPYLQRGILHSFHGLHAAARAIADFDQFLKLAPATHSWRTDAERLTERLRDELQERGWSEQTE
>Mature_148_residues
SEPKIPFKAKMWFAWGQSCTYWGNRTLSKQMYRWAFNAYTRAQTYAPWWGMPVLRRAVIRGRELDDYAGAVRDFGDLIKL
DPAWAEPYLQRGILHSFHGLHAAARAIADFDQFLKLAPATHSWRTDAERLTERLRDELQERGWSEQTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17524; Mature: 17393

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPKIPFKAKMWFAWGQSCTYWGNRTLSKQMYRWAFNAYTRAQTYAPWWGMPVLRRAVI
CCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
RGRELDDYAGAVRDFGDLIKLDPAWAEPYLQRGILHSFHGLHAAARAIADFDQFLKLAPA
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
THSWRTDAERLTERLRDELQERGWSEQTE
CCCCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SEPKIPFKAKMWFAWGQSCTYWGNRTLSKQMYRWAFNAYTRAQTYAPWWGMPVLRRAVI
CCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
RGRELDDYAGAVRDFGDLIKLDPAWAEPYLQRGILHSFHGLHAAARAIADFDQFLKLAPA
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
THSWRTDAERLTERLRDELQERGWSEQTE
CCCCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA