| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is zraS [H]
Identifier: 159899976
GI number: 159899976
Start: 4351458
End: 4353092
Strand: Reverse
Name: zraS [H]
Synonym: Haur_3459
Alternate gene names: 159899976
Gene position: 4353092-4351458 (Counterclockwise)
Preceding gene: 159899977
Following gene: 159899975
Centisome position: 68.59
GC content: 49.91
Gene sequence:
>1635_bases ATGGCAAGTGGTCAAGAAACGATTCTAGTGATCGACGATAGCGAAGCAATTCGGGTCAAACTTCAGGCTCAATTGCGTTC GCTGGGCTATCAGGTCGTGTTGGCTGAAACTGGGCGAAATGGGCTAAACGCGATTACCCAACATCATCCGCACCTCATTT TGCTCGATTATCAGCTGCCTGATACCACTGGGTTGGATTTGCTGCGTAAGCTGCGCACCGATGGCAACACCGTGCCAATT TTGCTGATGACTGCCGAAGGTTCCGAACGCATCGCCGTAACGGCCTTCAAAATGGGCGTGCGCGATTATTTGATCAAGCC TTTTGAGCCGCAAGATGTTGCTCAGGCGATCGATCGGGCGCTGCGTGAGTGGCGTTTGCAACGTGAAAAAGAAATTTTGC TTGGTCAATTACAAGGCCAAGTGCGCCAATTAACGGTTTTGCATCGGGTTGGTAAGGCGGTAACTGCCCAACTTGATGCC AGCAATTTGCTTGAACGAATTGTTGAAGCCTCAGTTTTTCTTTCGAATGCCGATGAAGGTTTTGTGCAATTAATTGATGA TAATCAGTTGGTTGTGCGAGCCTCACACAATATTAACCCATTGCATTTGCGTGAGCTAAGCAAACATACCGATTATGAAT TGGCAACGCGCACAATTAAAACCAACAAACCAATTCGGATCAATTCCGAGCGCGATGGAATTCGGGTGCAAGCCAATTAT TTGGCCCAAGCTGTGCTCATGGTGCCGTTGTTGGTGGGGACTGAAGCCTTGGGCGTGCTGACCGTGGCTGCGACAACCCA TCGCCGCAATTTTGATGAAGGCGATGAGCGCTTGATGCAGATGCTGGCCGACTACGCCTCGATTGCCTTGCACAACGCCC GCACCTACAGCGCACTGCGCGAAACCCAAGGTCGCTTGGTTGAAGCTGAAAAATTATCGGGCATGGGGCGCATGGCGGCT TCGCTAGCCCACGAAATCAACAATCCACTGGCGATTATTCGCTCAGGCTTGGAGTTGGTGGCGCAACAACACACACCTGG CACGGCGCTTGGCGATTTGGTGCAAGGACTGGATGAAGAAGTGGCGCGGATTGCGCGGTTGCTCTATACCTTGGTGAATT TCTATCAGCCCAATAACGATGGTGTGCCGCCTGATCTCAATCATTTGATCATTTCACTGATGCACATCACCAAACCACAA CTTGATAAAGCCAATGTTAAACTGTATCAGGAGTTGGCGACCGATCTGCCAGCGCCAAACATTAGCAGCGATGCTTGTAA GCAAGTTTTGATCAATTTGGTGCGCAATGCGATTGATGCGATGCCCGATGGCGGCAAATTGACCATTCGCACGGCCCATC AAAAGGGTCAAATTTTTGTCAATGTTGAAGATAGCGGAATTGGGATTCCGCCCGAACATCGCGAACGTATTTTTGAGCCA TTCTTTAGCACTAAAGGTGTGACGGGAACGGGGCTTGGGCTTTCAGTTGTTTATGGTATTTTGCAACAAGTTGGCGGCGC AATTTCGGTAGAGAGCATCGTGGATAAAGGCTCGAACTTTACCTTGCGCATTCCGGTTGCAGCCCAACGCAGCCAATCGC CCGATCTTGATTCCGATGAATTGTTGATTGGTTAA
Upstream 100 bases:
>100_bases TTCTGCCTTTTGACTTTTCATTCGTCCTTGCGTTCTACGCTTCTCTGTCGTATGATTTTGGCGAGAATCTCCTTGTTGAG CATTGTAGAACGGCGAGCCT
Downstream 100 bases:
>100_bases TCCGATGAATGAGTTGCCATTACAGATCTTGGTGGTCGATGACGAGCCACGCTTAAGTGGTCAGTTGCGGTTGTTATTGG AAGGGCAAGGCTACAGCGTA
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 544; Mature: 543
Protein sequence:
>544_residues MASGQETILVIDDSEAIRVKLQAQLRSLGYQVVLAETGRNGLNAITQHHPHLILLDYQLPDTTGLDLLRKLRTDGNTVPI LLMTAEGSERIAVTAFKMGVRDYLIKPFEPQDVAQAIDRALREWRLQREKEILLGQLQGQVRQLTVLHRVGKAVTAQLDA SNLLERIVEASVFLSNADEGFVQLIDDNQLVVRASHNINPLHLRELSKHTDYELATRTIKTNKPIRINSERDGIRVQANY LAQAVLMVPLLVGTEALGVLTVAATTHRRNFDEGDERLMQMLADYASIALHNARTYSALRETQGRLVEAEKLSGMGRMAA SLAHEINNPLAIIRSGLELVAQQHTPGTALGDLVQGLDEEVARIARLLYTLVNFYQPNNDGVPPDLNHLIISLMHITKPQ LDKANVKLYQELATDLPAPNISSDACKQVLINLVRNAIDAMPDGGKLTIRTAHQKGQIFVNVEDSGIGIPPEHRERIFEP FFSTKGVTGTGLGLSVVYGILQQVGGAISVESIVDKGSNFTLRIPVAAQRSQSPDLDSDELLIG
Sequences:
>Translated_544_residues MASGQETILVIDDSEAIRVKLQAQLRSLGYQVVLAETGRNGLNAITQHHPHLILLDYQLPDTTGLDLLRKLRTDGNTVPI LLMTAEGSERIAVTAFKMGVRDYLIKPFEPQDVAQAIDRALREWRLQREKEILLGQLQGQVRQLTVLHRVGKAVTAQLDA SNLLERIVEASVFLSNADEGFVQLIDDNQLVVRASHNINPLHLRELSKHTDYELATRTIKTNKPIRINSERDGIRVQANY LAQAVLMVPLLVGTEALGVLTVAATTHRRNFDEGDERLMQMLADYASIALHNARTYSALRETQGRLVEAEKLSGMGRMAA SLAHEINNPLAIIRSGLELVAQQHTPGTALGDLVQGLDEEVARIARLLYTLVNFYQPNNDGVPPDLNHLIISLMHITKPQ LDKANVKLYQELATDLPAPNISSDACKQVLINLVRNAIDAMPDGGKLTIRTAHQKGQIFVNVEDSGIGIPPEHRERIFEP FFSTKGVTGTGLGLSVVYGILQQVGGAISVESIVDKGSNFTLRIPVAAQRSQSPDLDSDELLIG >Mature_543_residues ASGQETILVIDDSEAIRVKLQAQLRSLGYQVVLAETGRNGLNAITQHHPHLILLDYQLPDTTGLDLLRKLRTDGNTVPIL LMTAEGSERIAVTAFKMGVRDYLIKPFEPQDVAQAIDRALREWRLQREKEILLGQLQGQVRQLTVLHRVGKAVTAQLDAS NLLERIVEASVFLSNADEGFVQLIDDNQLVVRASHNINPLHLRELSKHTDYELATRTIKTNKPIRINSERDGIRVQANYL AQAVLMVPLLVGTEALGVLTVAATTHRRNFDEGDERLMQMLADYASIALHNARTYSALRETQGRLVEAEKLSGMGRMAAS LAHEINNPLAIIRSGLELVAQQHTPGTALGDLVQGLDEEVARIARLLYTLVNFYQPNNDGVPPDLNHLIISLMHITKPQL DKANVKLYQELATDLPAPNISSDACKQVLINLVRNAIDAMPDGGKLTIRTAHQKGQIFVNVEDSGIGIPPEHRERIFEPF FSTKGVTGTGLGLSVVYGILQQVGGAISVESIVDKGSNFTLRIPVAAQRSQSPDLDSDELLIG
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=229, Percent_Identity=34.4978165938865, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1788549, Length=239, Percent_Identity=32.6359832635983, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI145693157, Length=356, Percent_Identity=24.7191011235955, Blast_Score=82, Evalue=9e-17, Organism=Escherichia coli, GI87081816, Length=229, Percent_Identity=28.82096069869, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1790300, Length=241, Percent_Identity=29.4605809128631, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1788550, Length=122, Percent_Identity=31.1475409836066, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1790437, Length=114, Percent_Identity=36.8421052631579, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI48994928, Length=247, Percent_Identity=27.5303643724696, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1789809, Length=115, Percent_Identity=34.7826086956522, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1786599, Length=117, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1786600, Length=232, Percent_Identity=24.5689655172414, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790299, Length=194, Percent_Identity=27.8350515463918, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787375, Length=196, Percent_Identity=28.0612244897959, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87082128, Length=239, Percent_Identity=27.6150627615063, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786784, Length=101, Percent_Identity=37.6237623762376, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1786911, Length=101, Percent_Identity=37.6237623762376, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI1788394, Length=122, Percent_Identity=34.4262295081967, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1790860, Length=118, Percent_Identity=30.5084745762712, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1786783, Length=229, Percent_Identity=25.3275109170306, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1788191, Length=122, Percent_Identity=29.5081967213115, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1789808, Length=222, Percent_Identity=23.4234234234234, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1790552, Length=130, Percent_Identity=30, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1786912, Length=300, Percent_Identity=23, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1789402, Length=115, Percent_Identity=32.1739130434783, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1787487, Length=104, Percent_Identity=31.7307692307692, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1790861, Length=213, Percent_Identity=26.2910798122066, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1788905, Length=126, Percent_Identity=31.7460317460317, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 59845; Mature: 59713
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGQETILVIDDSEAIRVKLQAQLRSLGYQVVLAETGRNGLNAITQHHPHLILLDYQLP CCCCCCEEEEEECCCEEEEEHHHHHHHCCEEEEEEECCCCHHHHHHCCCCEEEEEEECCC DTTGLDLLRKLRTDGNTVPILLMTAEGSERIAVTAFKMGVRDYLIKPFEPQDVAQAIDRA CCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEHHHHCHHHHHCCCCCHHHHHHHHHHH LREWRLQREKEILLGQLQGQVRQLTVLHRVGKAVTAQLDASNLLERIVEASVFLSNADEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCCCC FVQLIDDNQLVVRASHNINPLHLRELSKHTDYELATRTIKTNKPIRINSERDGIRVQANY EEEEECCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHEEECCCCEEECCCCCCEEEEHHH LAQAVLMVPLLVGTEALGVLTVAATTHRRNFDEGDERLMQMLADYASIALHNARTYSALR HHHHHHHHHHHHCCHHHHHEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHH ETQGRLVEAEKLSGMGRMAASLAHEINNPLAIIRSGLELVAQQHTPGTALGDLVQGLDEE HHHCCEEEHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VARIARLLYTLVNFYQPNNDGVPPDLNHLIISLMHITKPQLDKANVKLYQELATDLPAPN HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC ISSDACKQVLINLVRNAIDAMPDGGKLTIRTAHQKGQIFVNVEDSGIGIPPEHRERIFEP CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHH FFSTKGVTGTGLGLSVVYGILQQVGGAISVESIVDKGSNFTLRIPVAAQRSQSPDLDSDE HHCCCCCCCCCHHHHHHHHHHHHHCCCEEHHHHHCCCCCEEEEEEEHCCCCCCCCCCCCC LLIG EECC >Mature Secondary Structure ASGQETILVIDDSEAIRVKLQAQLRSLGYQVVLAETGRNGLNAITQHHPHLILLDYQLP CCCCCEEEEEECCCEEEEEHHHHHHHCCEEEEEEECCCCHHHHHHCCCCEEEEEEECCC DTTGLDLLRKLRTDGNTVPILLMTAEGSERIAVTAFKMGVRDYLIKPFEPQDVAQAIDRA CCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEHHHHCHHHHHCCCCCHHHHHHHHHHH LREWRLQREKEILLGQLQGQVRQLTVLHRVGKAVTAQLDASNLLERIVEASVFLSNADEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCCCC FVQLIDDNQLVVRASHNINPLHLRELSKHTDYELATRTIKTNKPIRINSERDGIRVQANY EEEEECCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHEEECCCCEEECCCCCCEEEEHHH LAQAVLMVPLLVGTEALGVLTVAATTHRRNFDEGDERLMQMLADYASIALHNARTYSALR HHHHHHHHHHHHCCHHHHHEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHH ETQGRLVEAEKLSGMGRMAASLAHEINNPLAIIRSGLELVAQQHTPGTALGDLVQGLDEE HHHCCEEEHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VARIARLLYTLVNFYQPNNDGVPPDLNHLIISLMHITKPQLDKANVKLYQELATDLPAPN HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC ISSDACKQVLINLVRNAIDAMPDGGKLTIRTAHQKGQIFVNVEDSGIGIPPEHRERIFEP CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHH FFSTKGVTGTGLGLSVVYGILQQVGGAISVESIVDKGSNFTLRIPVAAQRSQSPDLDSDE HHCCCCCCCCCHHHHHHHHHHHHHCCCEEHHHHHCCCCCEEEEEEEHCCCCCCCCCCCCC LLIG EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]