Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899926

Identifier: 159899926

GI number: 159899926

Start: 4295411

End: 4296748

Strand: Reverse

Name: 159899926

Synonym: Haur_3409

Alternate gene names: NA

Gene position: 4296748-4295411 (Counterclockwise)

Preceding gene: 159899927

Following gene: 159899925

Centisome position: 67.7

GC content: 51.42

Gene sequence:

>1338_bases
ATGCTATCAGCGGAATTTAGCGCGAGTAACGACCTCATCCAAGCGATCGATCAACTGTTGCTGGCAGGCTTTACCAATCT
CAATCATAGCCATCAAATGAGTTTGCAGCGGGTGGCTCAAGTTTATCGCGATACGCCGTTTGAGCAGGCGATGCTCAGCG
CTGTGACTGATTTGAGCAATGGTGTGTTTCAACCAGCCGCGTTTATGTTGCTGGCGGTTGCCCGCGCATCGCTGCAAGCT
GCCCAGCATGATCAACTTTTGCAGCAAATTCGGGTGCAACTTGGTCGCCCAATCAATGATCAATCAACATCAAAAGCCGT
GGCGCTTGCCGCAACTCCGCCCTTGTTGGGTAGCGTGCAGCATTGGCTGACCGATTTAGCAGTAATGGGCTTTTCGCGAC
TGGAGCCAGCGATGATCAACGCCTTTACGCCAACCCTCGCCCAACTGCAAACTAACCCCGATTATCTGCGCACTTCGGCG
ATTCTCTCTGGTTGGCTGCATGAATTGCAACTTCAGCCTGAACAATTGCCTTTGTTTCGTTGGGGCGATTTGTGGACGCG
GGCCATGCTTTCGACCCTCAGCCTGAATTCAACCCCACCAACCCAACCTGTCAGTGGCACGCTGTACCCCTTGGGCATCG
AATGGCGACAACATTCCACGCTAGTTAGTTTGGTGGTCTATGCTGTGCTTGAGGCCGATTCCAAGGCTAGCTTGGCTACA
ATCAGCCAATCGGCCTATAAAGTTGCGGCAATTCAGCAGGATCAATTGTGGTTGCTGTTTCCTGAGTTGAGCCTGTTGTT
CGATAGCTTGAGCACAGCCAAAGCCTTAGTGTTGCGCGATGCAGCAAGCTTGCCAACTGGCCAATTGCTGTGGGATGCGC
AGACCGCCAGTTTGGGCGCTAAATATGATTTGCTTGATGTGGCCGAACGCTATTTTGGCCTGAATCCCAAACAATCAATT
GCCCAAGCTCAACTTGCCCCCCAACAACGCCACCCAGTCCATGTGGCCGAGCCAGTTGTTTTGAGCAACTATCAACTCAA
TCAAACTACCGAAGCTTGCACAATAACGACTGGTGAACACAGTTTCATGCTTGAGCTTGGGTTGATCAACGGCACTGAAA
TCGATTTGGCGGTGCTTGAATCGGCTCAACGCTTGTTTGGCTTGGTGCGCTACGATGCTGGCGAGTGGCTGCTGCGACCT
TTGGCAACCAGCCTGAAAAAAGGCAAGCCGCTATTTATTGGGCTAGAAAACGGCAAAGTTTTTAAGAAAGCGCCTAAAAA
TAATGCTGTTGGCATTCTCAAAGAGCGTGCTAGCCGCTTGCTCAGGGAGAAATCATGA

Upstream 100 bases:

>100_bases
GTGCAATTTTTAGCCGTTTTCTTGGCTCACTCCAATTGCTCGAAATTCCGCTCAGCCCAATGCCACTGCCCGAGATGGAT
TGGTTTGCAGGGGGCCTGTG

Downstream 100 bases:

>100_bases
ACCAATCCGAGCTATTAAATCGTCGCCAAGTGCTCTATTGGCGTATGCTCAGCACTATGTTTGGCTATGACCAGCAGGGC
GAAAATTTCGACAGCATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MLSAEFSASNDLIQAIDQLLLAGFTNLNHSHQMSLQRVAQVYRDTPFEQAMLSAVTDLSNGVFQPAAFMLLAVARASLQA
AQHDQLLQQIRVQLGRPINDQSTSKAVALAATPPLLGSVQHWLTDLAVMGFSRLEPAMINAFTPTLAQLQTNPDYLRTSA
ILSGWLHELQLQPEQLPLFRWGDLWTRAMLSTLSLNSTPPTQPVSGTLYPLGIEWRQHSTLVSLVVYAVLEADSKASLAT
ISQSAYKVAAIQQDQLWLLFPELSLLFDSLSTAKALVLRDAASLPTGQLLWDAQTASLGAKYDLLDVAERYFGLNPKQSI
AQAQLAPQQRHPVHVAEPVVLSNYQLNQTTEACTITTGEHSFMLELGLINGTEIDLAVLESAQRLFGLVRYDAGEWLLRP
LATSLKKGKPLFIGLENGKVFKKAPKNNAVGILKERASRLLREKS

Sequences:

>Translated_445_residues
MLSAEFSASNDLIQAIDQLLLAGFTNLNHSHQMSLQRVAQVYRDTPFEQAMLSAVTDLSNGVFQPAAFMLLAVARASLQA
AQHDQLLQQIRVQLGRPINDQSTSKAVALAATPPLLGSVQHWLTDLAVMGFSRLEPAMINAFTPTLAQLQTNPDYLRTSA
ILSGWLHELQLQPEQLPLFRWGDLWTRAMLSTLSLNSTPPTQPVSGTLYPLGIEWRQHSTLVSLVVYAVLEADSKASLAT
ISQSAYKVAAIQQDQLWLLFPELSLLFDSLSTAKALVLRDAASLPTGQLLWDAQTASLGAKYDLLDVAERYFGLNPKQSI
AQAQLAPQQRHPVHVAEPVVLSNYQLNQTTEACTITTGEHSFMLELGLINGTEIDLAVLESAQRLFGLVRYDAGEWLLRP
LATSLKKGKPLFIGLENGKVFKKAPKNNAVGILKERASRLLREKS
>Mature_445_residues
MLSAEFSASNDLIQAIDQLLLAGFTNLNHSHQMSLQRVAQVYRDTPFEQAMLSAVTDLSNGVFQPAAFMLLAVARASLQA
AQHDQLLQQIRVQLGRPINDQSTSKAVALAATPPLLGSVQHWLTDLAVMGFSRLEPAMINAFTPTLAQLQTNPDYLRTSA
ILSGWLHELQLQPEQLPLFRWGDLWTRAMLSTLSLNSTPPTQPVSGTLYPLGIEWRQHSTLVSLVVYAVLEADSKASLAT
ISQSAYKVAAIQQDQLWLLFPELSLLFDSLSTAKALVLRDAASLPTGQLLWDAQTASLGAKYDLLDVAERYFGLNPKQSI
AQAQLAPQQRHPVHVAEPVVLSNYQLNQTTEACTITTGEHSFMLELGLINGTEIDLAVLESAQRLFGLVRYDAGEWLLRP
LATSLKKGKPLFIGLENGKVFKKAPKNNAVGILKERASRLLREKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48895; Mature: 48895

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSAEFSASNDLIQAIDQLLLAGFTNLNHSHQMSLQRVAQVYRDTPFEQAMLSAVTDLSN
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
GVFQPAAFMLLAVARASLQAAQHDQLLQQIRVQLGRPINDQSTSKAVALAATPPLLGSVQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHH
HWLTDLAVMGFSRLEPAMINAFTPTLAQLQTNPDYLRTSAILSGWLHELQLQPEQLPLFR
HHHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHCCEEH
WGDLWTRAMLSTLSLNSTPPTQPVSGTLYPLGIEWRQHSTLVSLVVYAVLEADSKASLAT
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHH
ISQSAYKVAAIQQDQLWLLFPELSLLFDSLSTAKALVLRDAASLPTGQLLWDAQTASLGA
HHHHHHEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHCCC
KYDLLDVAERYFGLNPKQSIAQAQLAPQQRHPVHVAEPVVLSNYQLNQTTEACTITTGEH
CCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEECCCEEECCEECCCCCCEEEEEECCC
SFMLELGLINGTEIDLAVLESAQRLFGLVRYDAGEWLLRPLATSLKKGKPLFIGLENGKV
EEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCE
FKKAPKNNAVGILKERASRLLREKS
EECCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSAEFSASNDLIQAIDQLLLAGFTNLNHSHQMSLQRVAQVYRDTPFEQAMLSAVTDLSN
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
GVFQPAAFMLLAVARASLQAAQHDQLLQQIRVQLGRPINDQSTSKAVALAATPPLLGSVQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHH
HWLTDLAVMGFSRLEPAMINAFTPTLAQLQTNPDYLRTSAILSGWLHELQLQPEQLPLFR
HHHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHCCEEH
WGDLWTRAMLSTLSLNSTPPTQPVSGTLYPLGIEWRQHSTLVSLVVYAVLEADSKASLAT
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHH
ISQSAYKVAAIQQDQLWLLFPELSLLFDSLSTAKALVLRDAASLPTGQLLWDAQTASLGA
HHHHHHEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHCCC
KYDLLDVAERYFGLNPKQSIAQAQLAPQQRHPVHVAEPVVLSNYQLNQTTEACTITTGEH
CCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEECCCEEECCEECCCCCCEEEEEECCC
SFMLELGLINGTEIDLAVLESAQRLFGLVRYDAGEWLLRPLATSLKKGKPLFIGLENGKV
EEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCE
FKKAPKNNAVGILKERASRLLREKS
EECCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA