| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yehL [H]
Identifier: 159899924
GI number: 159899924
Start: 4292897
End: 4294015
Strand: Reverse
Name: yehL [H]
Synonym: Haur_3407
Alternate gene names: 159899924
Gene position: 4294015-4292897 (Counterclockwise)
Preceding gene: 159899925
Following gene: 159899923
Centisome position: 67.66
GC content: 52.28
Gene sequence:
>1119_bases ATGTCTGATACCGTTTTGCGCTTGCCCGCCGAACTCAAATATGCCGATGAATTGCGCTATTTAGCCGAGCGGGATAACGG TCAACGCCCTGCTCGCTGGCAACTTTCGCCCCAGATGGTGCGCACCTTCGTGCTTGGCAGTACGCCTGCTCAAAAGCTTG ATCGCGAGATTGCCCAAAAATGGTATGGCGACCCCAGCATTGCCGAGCGAGCGATTGTTACCTTGGCCTCGGATCGCGGT TTATTGTTGATTGGCGACCCTGGCACGGGCAAAAGCTGGTTGGCCGAATTGCTGGCGGCAGCGATTTGTGGCGATTCGAC CTACGTTGTGCAAGGCACGGCAGGCACAACCGAAGACCAAATTAAATATTCGTGGAATATTGCCATGGTGATTGCCGCTG GCCAATCGCGTGATTCGATGATTCCTTCGCCCATTATGACCAGTATGCAACTTGGCGCGATGGGTCGGTTTGAAGAATTA ACCCGTTGTACCAGCGATGTCCAAGATGCGCTGATCTCGATTTTGAGCGAAAAATATATTTCGATTCCTGAATTGCGCAA CGATAATGTGGTGTTTGCCAAGCAAGGCTTCAACATCATTGCCACTGCCAACAGCCGTGATCGCGGGGTTAACGACCTTT CGTCGGCGCTCAAACGGCGTTTTAATTTTGTGCATATTCCGGTTGTGACCAACAAAAAGCAAGAACGCGAAATTATTCTG TTTCGCACGACCGAGCTTTTGGAGCGCCAACAAGTGCGAATCGACGTTGCGCCAACCTTGCTTGATGTCTTGCTACAAAC TTTTGCCGATTTGCGCGAAGCCAGTGCCAGTGCTAGCTCCGACGATGCCAAACTTGAATCAGCGCTCTCGACTGCTGAAC AAATTGGCGTGCTGGAAGATGCTGTGCTCTATTCGACCTATTTTGGTGAGCAGCGCCTCACGCCCGAGATTCTTGGACGC TCGTTGGTTGGCACGTTGGTTCGTCGCCGCCCCGAAGATGTCGCCGTGATGAACAAATTTTGGCATAGCGTGGTGGCCAA ACACAGCGAGAAACACCAAGGCGAATGGCGTGATTTCATGGCTGGCGGTCAGGATGCAATGAAGGTCATCGAGGGGTAA
Upstream 100 bases:
>100_bases AAGCTCAAAGAAATGGGTCGGCCAATTTTTGCTGGCAGCCCTCGCAAGCTGATCGAACAAATTAAGCAATTTATTACCTT GTAATGAAGGAGTTGTCATA
Downstream 100 bases:
>100_bases ACCCATGCTTGATTCACTAACCCAACAATTAAAGGCCACAGCGGCAGCCTTCAGCGAAGATGCTGAGGCACTGCAACGCT TGCTCCAACGCATGGCCCAT
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MSDTVLRLPAELKYADELRYLAERDNGQRPARWQLSPQMVRTFVLGSTPAQKLDREIAQKWYGDPSIAERAIVTLASDRG LLLIGDPGTGKSWLAELLAAAICGDSTYVVQGTAGTTEDQIKYSWNIAMVIAAGQSRDSMIPSPIMTSMQLGAMGRFEEL TRCTSDVQDALISILSEKYISIPELRNDNVVFAKQGFNIIATANSRDRGVNDLSSALKRRFNFVHIPVVTNKKQEREIIL FRTTELLERQQVRIDVAPTLLDVLLQTFADLREASASASSDDAKLESALSTAEQIGVLEDAVLYSTYFGEQRLTPEILGR SLVGTLVRRRPEDVAVMNKFWHSVVAKHSEKHQGEWRDFMAGGQDAMKVIEG
Sequences:
>Translated_372_residues MSDTVLRLPAELKYADELRYLAERDNGQRPARWQLSPQMVRTFVLGSTPAQKLDREIAQKWYGDPSIAERAIVTLASDRG LLLIGDPGTGKSWLAELLAAAICGDSTYVVQGTAGTTEDQIKYSWNIAMVIAAGQSRDSMIPSPIMTSMQLGAMGRFEEL TRCTSDVQDALISILSEKYISIPELRNDNVVFAKQGFNIIATANSRDRGVNDLSSALKRRFNFVHIPVVTNKKQEREIIL FRTTELLERQQVRIDVAPTLLDVLLQTFADLREASASASSDDAKLESALSTAEQIGVLEDAVLYSTYFGEQRLTPEILGR SLVGTLVRRRPEDVAVMNKFWHSVVAKHSEKHQGEWRDFMAGGQDAMKVIEG >Mature_371_residues SDTVLRLPAELKYADELRYLAERDNGQRPARWQLSPQMVRTFVLGSTPAQKLDREIAQKWYGDPSIAERAIVTLASDRGL LLIGDPGTGKSWLAELLAAAICGDSTYVVQGTAGTTEDQIKYSWNIAMVIAAGQSRDSMIPSPIMTSMQLGAMGRFEELT RCTSDVQDALISILSEKYISIPELRNDNVVFAKQGFNIIATANSRDRGVNDLSSALKRRFNFVHIPVVTNKKQEREIILF RTTELLERQQVRIDVAPTLLDVLLQTFADLREASASASSDDAKLESALSTAEQIGVLEDAVLYSTYFGEQRLTPEILGRS LVGTLVRRRPEDVAVMNKFWHSVVAKHSEKHQGEWRDFMAGGQDAMKVIEG
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082049, Length=354, Percent_Identity=40.9604519774011, Blast_Score=263, Evalue=1e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011704 [H]
Pfam domain/function: PF07728 AAA_5 [H]
EC number: NA
Molecular weight: Translated: 41352; Mature: 41220
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTVLRLPAELKYADELRYLAERDNGQRPARWQLSPQMVRTFVLGSTPAQKLDREIAQK CCCCEEECCHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHH WYGDPSIAERAIVTLASDRGLLLIGDPGTGKSWLAELLAAAICGDSTYVVQGTAGTTEDQ HCCCHHHHHHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC IKYSWNIAMVIAAGQSRDSMIPSPIMTSMQLGAMGRFEELTRCTSDVQDALISILSEKYI EEEEEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC SIPELRNDNVVFAKQGFNIIATANSRDRGVNDLSSALKRRFNFVHIPVVTNKKQEREIIL CCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCCCEEEE FRTTELLERQQVRIDVAPTLLDVLLQTFADLREASASASSDDAKLESALSTAEQIGVLED EECHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AVLYSTYFGEQRLTPEILGRSLVGTLVRRRPEDVAVMNKFWHSVVAKHSEKHQGEWRDFM HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHCCCHHHHHH AGGQDAMKVIEG CCCHHHHHHHCC >Mature Secondary Structure SDTVLRLPAELKYADELRYLAERDNGQRPARWQLSPQMVRTFVLGSTPAQKLDREIAQK CCCEEECCHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHH WYGDPSIAERAIVTLASDRGLLLIGDPGTGKSWLAELLAAAICGDSTYVVQGTAGTTEDQ HCCCHHHHHHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC IKYSWNIAMVIAAGQSRDSMIPSPIMTSMQLGAMGRFEELTRCTSDVQDALISILSEKYI EEEEEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC SIPELRNDNVVFAKQGFNIIATANSRDRGVNDLSSALKRRFNFVHIPVVTNKKQEREIIL CCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCCCEEEE FRTTELLERQQVRIDVAPTLLDVLLQTFADLREASASASSDDAKLESALSTAEQIGVLED EECHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AVLYSTYFGEQRLTPEILGRSLVGTLVRRRPEDVAVMNKFWHSVVAKHSEKHQGEWRDFM HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHCCCHHHHHH AGGQDAMKVIEG CCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]