| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899877
Identifier: 159899877
GI number: 159899877
Start: 4237645
End: 4238364
Strand: Reverse
Name: 159899877
Synonym: Haur_3360
Alternate gene names: NA
Gene position: 4238364-4237645 (Counterclockwise)
Preceding gene: 159899879
Following gene: 159899876
Centisome position: 66.78
GC content: 49.72
Gene sequence:
>720_bases ATGGCAATTTTGCCAAAAATTCTGCGCCGTTATGCCAAAAATTCATCGCGAGTGTATCTTGAGCAGTTTGTGCAACAGGC TGCCCAAAGCCTGCAACCGGGCCAACGAATGCTCGATGCTGGGGCGGGCGATGGCGCATATCAGCGCTTTTTTAGCCATG TAACCTATGAGTCAGCCGATTTTTGCCAGGTCGATAAAGCCTATGCAGCGATGACCTATGTCTGTGATTTAGCGGCAGTG CCGGTTGAGTCCGAACGCTATGATTTGATTTTGCTGACTCAGGTTTTGGAGCATTTGCCCAATCCCCAACTGGTATTAAA AGAGATGCTGCGGCTGCTCAAGCCGAATGGCACGCTTTGGCTCTCAGCTCCTTTATTTTATGAAGAGCATGAAGTGCCTT ACGATTTCTATCGCTATACTCAGTTTGGCTTCAAGCATCAGCTGACGCAGGCGGGGTTTCAGGTTGAGCAAACGCAGTGG CTTGAAGGCTATTACGGCACATTAGCCTATCAGGCCGACTTAGCCGTGCGCAGTTTGCCGCTCAATCCGCGCTTGTATGG TGGTGGTTTTGCTGGTTTTGGCGGAAGTTTGGCCGCACTGCTGCTTCGGCCAATGCTGGTGGTTACCTCATTGTTATTTA GCCGCCTTGACCTTCAATATAAATACACTGCCGCCGGAATGTGCAAAAATTATGCGCTAATCGCTCGTAAAACTGGCTAA
Upstream 100 bases:
>100_bases ATTATTGATCGGTTTAAGTGGATTTGGGTTGGTTTGCTGATGGCTTAACAGCATGGTATGCTTGGCAGCGGTTCGTTAAC TATTGTTTTAGGAAGTTATT
Downstream 100 bases:
>100_bases ATGCCACTAATCCTTTTGGGTTAATCGGGCAGTTTAGCCCTTGTTTAGAGGGGTTAATTAGCAGTAATCAACAGGAGTAG TCACATTTTGGGAATCAAAG
Product: type 11 methyltransferase
Products: NA
Alternate protein names: Ubiquinone/Menaquinone Biosynthesis Methylase-Like Protein; Methyltransferase FkbM; Glycosyltransferase
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MAILPKILRRYAKNSSRVYLEQFVQQAAQSLQPGQRMLDAGAGDGAYQRFFSHVTYESADFCQVDKAYAAMTYVCDLAAV PVESERYDLILLTQVLEHLPNPQLVLKEMLRLLKPNGTLWLSAPLFYEEHEVPYDFYRYTQFGFKHQLTQAGFQVEQTQW LEGYYGTLAYQADLAVRSLPLNPRLYGGGFAGFGGSLAALLLRPMLVVTSLLFSRLDLQYKYTAAGMCKNYALIARKTG
Sequences:
>Translated_239_residues MAILPKILRRYAKNSSRVYLEQFVQQAAQSLQPGQRMLDAGAGDGAYQRFFSHVTYESADFCQVDKAYAAMTYVCDLAAV PVESERYDLILLTQVLEHLPNPQLVLKEMLRLLKPNGTLWLSAPLFYEEHEVPYDFYRYTQFGFKHQLTQAGFQVEQTQW LEGYYGTLAYQADLAVRSLPLNPRLYGGGFAGFGGSLAALLLRPMLVVTSLLFSRLDLQYKYTAAGMCKNYALIARKTG >Mature_238_residues AILPKILRRYAKNSSRVYLEQFVQQAAQSLQPGQRMLDAGAGDGAYQRFFSHVTYESADFCQVDKAYAAMTYVCDLAAVP VESERYDLILLTQVLEHLPNPQLVLKEMLRLLKPNGTLWLSAPLFYEEHEVPYDFYRYTQFGFKHQLTQAGFQVEQTQWL EGYYGTLAYQADLAVRSLPLNPRLYGGGFAGFGGSLAALLLRPMLVVTSLLFSRLDLQYKYTAAGMCKNYALIARKTG
Specific function: Unknown
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27056; Mature: 26924
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILPKILRRYAKNSSRVYLEQFVQQAAQSLQPGQRMLDAGAGDGAYQRFFSHVTYESAD CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCCCCCC FCQVDKAYAAMTYVCDLAAVPVESERYDLILLTQVLEHLPNPQLVLKEMLRLLKPNGTLW HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEE LSAPLFYEEHEVPYDFYRYTQFGFKHQLTQAGFQVEQTQWLEGYYGTLAYQADLAVRSLP EECCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEHHHHHHCCC LNPRLYGGGFAGFGGSLAALLLRPMLVVTSLLFSRLDLQYKYTAAGMCKNYALIARKTG CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCEEEEEECCC >Mature Secondary Structure AILPKILRRYAKNSSRVYLEQFVQQAAQSLQPGQRMLDAGAGDGAYQRFFSHVTYESAD CHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCCCCCC FCQVDKAYAAMTYVCDLAAVPVESERYDLILLTQVLEHLPNPQLVLKEMLRLLKPNGTLW HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEE LSAPLFYEEHEVPYDFYRYTQFGFKHQLTQAGFQVEQTQWLEGYYGTLAYQADLAVRSLP EECCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEHHHHHHCCC LNPRLYGGGFAGFGGSLAALLLRPMLVVTSLLFSRLDLQYKYTAAGMCKNYALIARKTG CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA