| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899791
Identifier: 159899791
GI number: 159899791
Start: 4135931
End: 4137694
Strand: Reverse
Name: 159899791
Synonym: Haur_3273
Alternate gene names: NA
Gene position: 4137694-4135931 (Counterclockwise)
Preceding gene: 159899792
Following gene: 159899789
Centisome position: 65.2
GC content: 48.64
Gene sequence:
>1764_bases ATGCGTCGAATCACATTTCGCTATTTGGCCTTGATTGGCCTGCTTTTACTTGGCAGTAGTTGGTTGCCCGCAGCTTCGGC TGAAACCTCGGTGGCAAACCTCAGCGACCTTGCGACTGGAGCAACCTCATCGATCAGCAATGAATCGATTAATCTAGCCT ATAACGGGTTAAGCTACTTTGTCGCTAACGATGGTAATAACGGTGTTGGTTTATGGCGCAGTGATGGGACGGCTGCTGGA ACCTTTATGCTGACCACCGCCGCACAAAACGCGATTAGCCCGCAATATCTTGTTGGCTATGGTGCATATGTCTATATTGC AGCCCATACCGAGACTGATGGCTACTCGATTTGGCAAACCGATGGTTCATCCAATAGCATTACCAAGGTTGTCAGCCTCG ATCCAAGCAACTACTCCACAGGCTATGTCAAAATTAGCCTGATGCAGGTTGTGCAAAATACGCTGTATTTCATTTTTTCC TATGAAGGGCAGATTGAAATCTGGAAACTTGATCAGGCCTTAGCACCAGTGCTGGTTAAAAAGGCGGTTGCCTTTAATTC TGCGTGGTCGGCGAGCAATATTGATCGCTTGGTTGAATACAATGGGGCAATCTATTTTGTTACCTCAACCATCACGATTA TTACCTATGGTGCTACCTCCGATTTATGGCGAACTGATGGAACGGCTGAGGGAACCTACAAAGTTCATTCAATCGATACC CGTAAATATGCTCAGGTTCTGGGACCCATTGTCGCTGGTGGCAAACTAATCTTCAATTCATTTCATGATGGGGTTGTGAC AAGCGATGGAACTCCAACGGGCATGGTGCGTTTTGAGAATCGCATTGATGTTGGCGAGGGTCCCATGCAACTTACCAGCG TCAATGGGATTGGCCTGATGACCTATTTTGGTGGTGAGCGCTTATGGAGCACTGATGGGACGGTTGCGGGAACCTACCCA ATTGATGTTAATCCAAATGGCCTTGATAATGTCAGTTTTGGCCCAGTGATTGGGAAGTATCTTTACTTCACCGCCGACCA TGCGAATTATGGCCGCGAGCTTTGGCGCACTGATGGCACAATCGCTGGGACGACCCTCGTGCACGATGGTATTCCAGGCG TAAATGCTAGCAACCCAAAAAACTTGGCAGCAGTTGGTAATCAATTGTACTTCAGTGCTGCGACTGCCCAAGGTGGCGTG CAGCCATGGAAATTGACTTGTGCTGGTGCAAACCCAACAATGCTTGGCCTAGTTGGTTCAAATACGGTTAATGCTGACCC TGGTTTATTTCTTGCCACTACTCAAGGCGTAGTGTTTGGGGCTACAACGCCATCCCTTGGTCACGAGCCTTGGCTGTACC GCGAAAGTGGCAATACATGGCTGAAGAGTAGTACCGTCGTCGGAACGGCCAGTGAGCAAGTTGGCGCAATTCCGGTGACA ATTGGTAATGATGGCACGCTTATGCAGCAAAGCATTACTGTAACGTTGACCCTCACCGATGGAGTCGAGTATCTTAGCGA TACGAGCGGAATTACCCCAACCATCCAAGGCTCGATGCTGACATGGCAACTGAACCAGATTCCTACGAACTGTAGCGAAC AAAGCTTTGTGGTCTATGTTGGCTTACCCGATGCCGAGGTTGGCGAACAACGACCATTTTCCGTGACGATCGGCGGTATG GTTGCGGGCGATATCAGCAATGATAATCAGTCTAATGGTCTGATTGTGGTTGGTAATCCACTGTTCTTACCAGCAGTTCA ATAA
Upstream 100 bases:
>100_bases TCTTACCAGCAGTTCAATAATATTGAAATTGGCTAAGCGCTGGCAGCATGGCTTAGCCCGTAATGAGCTATATCCAAATT AATTATCTGAGGAGAAAACA
Downstream 100 bases:
>100_bases GCTCATTTGTTGGTTTGTTTGAGATGTGCCGTTATTTTGACGGCACATTTCTATTTAAGCTGTGCTGCTGCCAATAAATC TGGCGCAATACTTGTGCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Hyalin Repeat-Containing Protein; Quinoprotein; Cycloinulo-Oligosaccharide Fructanotransferase; Cna B Domain-Containing Protein; Cadherin
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MRRITFRYLALIGLLLLGSSWLPAASAETSVANLSDLATGATSSISNESINLAYNGLSYFVANDGNNGVGLWRSDGTAAG TFMLTTAAQNAISPQYLVGYGAYVYIAAHTETDGYSIWQTDGSSNSITKVVSLDPSNYSTGYVKISLMQVVQNTLYFIFS YEGQIEIWKLDQALAPVLVKKAVAFNSAWSASNIDRLVEYNGAIYFVTSTITIITYGATSDLWRTDGTAEGTYKVHSIDT RKYAQVLGPIVAGGKLIFNSFHDGVVTSDGTPTGMVRFENRIDVGEGPMQLTSVNGIGLMTYFGGERLWSTDGTVAGTYP IDVNPNGLDNVSFGPVIGKYLYFTADHANYGRELWRTDGTIAGTTLVHDGIPGVNASNPKNLAAVGNQLYFSAATAQGGV QPWKLTCAGANPTMLGLVGSNTVNADPGLFLATTQGVVFGATTPSLGHEPWLYRESGNTWLKSSTVVGTASEQVGAIPVT IGNDGTLMQQSITVTLTLTDGVEYLSDTSGITPTIQGSMLTWQLNQIPTNCSEQSFVVYVGLPDAEVGEQRPFSVTIGGM VAGDISNDNQSNGLIVVGNPLFLPAVQ
Sequences:
>Translated_587_residues MRRITFRYLALIGLLLLGSSWLPAASAETSVANLSDLATGATSSISNESINLAYNGLSYFVANDGNNGVGLWRSDGTAAG TFMLTTAAQNAISPQYLVGYGAYVYIAAHTETDGYSIWQTDGSSNSITKVVSLDPSNYSTGYVKISLMQVVQNTLYFIFS YEGQIEIWKLDQALAPVLVKKAVAFNSAWSASNIDRLVEYNGAIYFVTSTITIITYGATSDLWRTDGTAEGTYKVHSIDT RKYAQVLGPIVAGGKLIFNSFHDGVVTSDGTPTGMVRFENRIDVGEGPMQLTSVNGIGLMTYFGGERLWSTDGTVAGTYP IDVNPNGLDNVSFGPVIGKYLYFTADHANYGRELWRTDGTIAGTTLVHDGIPGVNASNPKNLAAVGNQLYFSAATAQGGV QPWKLTCAGANPTMLGLVGSNTVNADPGLFLATTQGVVFGATTPSLGHEPWLYRESGNTWLKSSTVVGTASEQVGAIPVT IGNDGTLMQQSITVTLTLTDGVEYLSDTSGITPTIQGSMLTWQLNQIPTNCSEQSFVVYVGLPDAEVGEQRPFSVTIGGM VAGDISNDNQSNGLIVVGNPLFLPAVQ >Mature_587_residues MRRITFRYLALIGLLLLGSSWLPAASAETSVANLSDLATGATSSISNESINLAYNGLSYFVANDGNNGVGLWRSDGTAAG TFMLTTAAQNAISPQYLVGYGAYVYIAAHTETDGYSIWQTDGSSNSITKVVSLDPSNYSTGYVKISLMQVVQNTLYFIFS YEGQIEIWKLDQALAPVLVKKAVAFNSAWSASNIDRLVEYNGAIYFVTSTITIITYGATSDLWRTDGTAEGTYKVHSIDT RKYAQVLGPIVAGGKLIFNSFHDGVVTSDGTPTGMVRFENRIDVGEGPMQLTSVNGIGLMTYFGGERLWSTDGTVAGTYP IDVNPNGLDNVSFGPVIGKYLYFTADHANYGRELWRTDGTIAGTTLVHDGIPGVNASNPKNLAAVGNQLYFSAATAQGGV QPWKLTCAGANPTMLGLVGSNTVNADPGLFLATTQGVVFGATTPSLGHEPWLYRESGNTWLKSSTVVGTASEQVGAIPVT IGNDGTLMQQSITVTLTLTDGVEYLSDTSGITPTIQGSMLTWQLNQIPTNCSEQSFVVYVGLPDAEVGEQRPFSVTIGGM VAGDISNDNQSNGLIVVGNPLFLPAVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62272; Mature: 62272
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRITFRYLALIGLLLLGSSWLPAASAETSVANLSDLATGATSSISNESINLAYNGLSYF CCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECEEEE VANDGNNGVGLWRSDGTAAGTFMLTTAAQNAISPQYLVGYGAYVYIAAHTETDGYSIWQT EEECCCCCEEEEECCCCCCEEEEEEECHHCCCCCCEEEECCEEEEEEEECCCCCEEEEEE DGSSNSITKVVSLDPSNYSTGYVKISLMQVVQNTLYFIFSYEGQIEIWKLDQALAPVLVK CCCCCCEEEEEEECCCCCCCCEEEEEHHHHHHCCEEEEEEECCEEEEEECCHHHHHHHHH KAVAFNSAWSASNIDRLVEYNGAIYFVTSTITIITYGATSDLWRTDGTAEGTYKVHSIDT HHHHCCCCCCCCCCHHHHCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECH RKYAQVLGPIVAGGKLIFNSFHDGVVTSDGTPTGMVRFENRIDVGEGPMQLTSVNGIGLM HHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCEEEEECCCCCCCCCCEEEEEECCEEEE TYFGGERLWSTDGTVAGTYPIDVNPNGLDNVSFGPVIGKYLYFTADHANYGRELWRTDGT EEECCCEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHCCCCC IAGTTLVHDGIPGVNASNPKNLAAVGNQLYFSAATAQGGVQPWKLTCAGANPTMLGLVGS EEEEEEEECCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEEEEC NTVNADPGLFLATTQGVVFGATTPSLGHEPWLYRESGNTWLKSSTVVGTASEQVGAIPVT CCCCCCCCEEEEEECCEEEECCCCCCCCCCEEEEECCCEEEECCEEEEECCCCCCEEEEE IGNDGTLMQQSITVTLTLTDGVEYLSDTSGITPTIQGSMLTWQLNQIPTNCSEQSFVVYV ECCCCCEEEEEEEEEEEEECCHHHHCCCCCCCEEECCCEEEEEECCCCCCCCCCEEEEEE GLPDAEVGEQRPFSVTIGGMVAGDISNDNQSNGLIVVGNPLFLPAVQ ECCCCCCCCCCCEEEEECCEEEECCCCCCCCCCEEEECCCEEECCCC >Mature Secondary Structure MRRITFRYLALIGLLLLGSSWLPAASAETSVANLSDLATGATSSISNESINLAYNGLSYF CCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECEEEE VANDGNNGVGLWRSDGTAAGTFMLTTAAQNAISPQYLVGYGAYVYIAAHTETDGYSIWQT EEECCCCCEEEEECCCCCCEEEEEEECHHCCCCCCEEEECCEEEEEEEECCCCCEEEEEE DGSSNSITKVVSLDPSNYSTGYVKISLMQVVQNTLYFIFSYEGQIEIWKLDQALAPVLVK CCCCCCEEEEEEECCCCCCCCEEEEEHHHHHHCCEEEEEEECCEEEEEECCHHHHHHHHH KAVAFNSAWSASNIDRLVEYNGAIYFVTSTITIITYGATSDLWRTDGTAEGTYKVHSIDT HHHHCCCCCCCCCCHHHHCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECH RKYAQVLGPIVAGGKLIFNSFHDGVVTSDGTPTGMVRFENRIDVGEGPMQLTSVNGIGLM HHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCEEEEECCCCCCCCCCEEEEEECCEEEE TYFGGERLWSTDGTVAGTYPIDVNPNGLDNVSFGPVIGKYLYFTADHANYGRELWRTDGT EEECCCEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHCCCCC IAGTTLVHDGIPGVNASNPKNLAAVGNQLYFSAATAQGGVQPWKLTCAGANPTMLGLVGS EEEEEEEECCCCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEEEEC NTVNADPGLFLATTQGVVFGATTPSLGHEPWLYRESGNTWLKSSTVVGTASEQVGAIPVT CCCCCCCCEEEEEECCEEEECCCCCCCCCCEEEEECCCEEEECCEEEEECCCCCCEEEEE IGNDGTLMQQSITVTLTLTDGVEYLSDTSGITPTIQGSMLTWQLNQIPTNCSEQSFVVYV ECCCCCEEEEEEEEEEEEECCHHHHCCCCCCCEEECCCEEEEEECCCCCCCCCCEEEEEE GLPDAEVGEQRPFSVTIGGMVAGDISNDNQSNGLIVVGNPLFLPAVQ ECCCCCCCCCCCEEEEECCEEEECCCCCCCCCCEEEECCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA