| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899783
Identifier: 159899783
GI number: 159899783
Start: 4126663
End: 4128414
Strand: Reverse
Name: 159899783
Synonym: Haur_3265
Alternate gene names: NA
Gene position: 4128414-4126663 (Counterclockwise)
Preceding gene: 159899784
Following gene: 159899782
Centisome position: 65.05
GC content: 52.8
Gene sequence:
>1752_bases TTGAAGCGTCTGTTTGTTTCATTCGTCTTGATCTGCAGTCTTGTCATTATCTTCAGTGCTCCCAACCCATCATTTGGTCA AAGCCGAACTCCTGCGAAACCAGTTGATCGCGTTGATTTTGCTGCTCCAGCAGTAGCGGGCCAATTTGTGGTCAAATTCA AAGCCACAACCAGCAAAGCCAACCGCAGCTCGGCCCTCAAAGCCCTCGGCGCGGTACAAATCGATCGCATTGCAGCGCTT GATGCAGAAGTGATCGAAGTTGCGAGCCTCAAGAGCAACGATACCCTCGCAGGTCGCGAAGCTGTCTTGGCTGGCTTGAA GCAAAATCCCAATGTCGAATATGCCGAACCCAACTTTATTTATAATGTGAATTTTACGCCCAATGACCCAAGCCAAAGCT CACAATGGGCATGGGGTGTCATCCGTGCATATACCGGTTGGGATATAACCCAAGGCAGCAGCAGCGTGGTGATTGCAGTT GTTGATACAGGGGTTCAAGGCACCCACCCTGATCTTGATGCCAAGATGGTGGCTGGCTACGACTATATCGACAACGACTC AACGCCAACCGACGGCAATGGCCACGGTACCCACGTTGCAGGTACAAGCGCCGCTGAAACGAATAACAGCACTGGTGGTG CTGGCACATGTCCAAATTGTAAGGTGATGCCAGTGCGGGTATTGGGCAACGATGGTAGTGGGACGTTGGCTGGTGTGGCC AATGGGATCACCTACGCTGCCGACAATGGCGCAAAAGTCATCAATTTGAGCCTTGGTGGTGGTGGTTCGACCGCATTGCA AAATGCTGTTGACTACGCTTGGGGCCGTGGGGTGTTCTTGGCTTGTGCTGCTGGTAATAGCAACACCTCAAGCACCACCA GCTCGTATCCAGCTGCTTACACCAACTGTTTTGCGATCGCCTCAACCACCTCAAGCGATGCTCGTTCATCGTTCTCGAAC TACGGTTCGTGGGTTGAAGTGGCTGCCCCAGGTTCGAGCATCTACTCAACTTGGATCAACAGTGGCTACAACACGATCAA TGGTACTTCAATGGCTACCCCACACGTTGCTGGTTTGGCTGGCTTGTTGGCCTCACAAGGCTTGACCAATAGCCAAATTC GCGACCGCATCTGCTCGACCTCAGATCGCATCACGGGCACAGGCAGCACTTGGACTTGTGGTCGGATCAACGTCTACAAT GCTGTCAACAACGGTGGCTCAACCCCAACCCCAACGCCTCCAACCAGCACGCCAAATCCAACCACCCCAACCGTGGTTCC ACCAACCGCAACCCCACCTCCAGGCGGCGGTAGCATTGTCAATGGTGGCTTCGAAAGTGGCACAACTGGCTGGACCCAAG CCTCAAGCGGTGGTTATAACGTAATTGATACCACTCGCCCACGCACTGGTAGCTACAGCGTTTACATGGGTGGCTACAAC AATGCCAGCGAAGGGATCTACCAAACGTTGACCGTGCCAGCAGGCAAGTCATTGAGCTTCTACTGGTATCAAACCACTGC CGAAGGCAGCACGACAGCTTACGACTACCTGCGCGTTCGGGTCTACAACACCAGCGGAACCTTATTGGGAACCTTGGCTA CTCGCTCGAATGTCAACACCAAGAACGCTTGGGTGGCTGAAAGCTTGAGCTTGGCAGCCTATGCTGGTCAAACGGTTCGT ATCCGCTTTGAAACCACAACAGATAGCTCATTGATCACATCGTTCTTTGTTGACGATGTAAGCCTTCAATAA
Upstream 100 bases:
>100_bases ATTCCTTCGAAACAATGATGTGTACGTGCGGTAATCCAACCACTGTCGGTTTTGGGATTGCCCATGGTAAATTTGCAATC CACATATTGAGGAGGCACCC
Downstream 100 bases:
>100_bases GCTGCTCGTTCTTCCTTAGTTTGCAATCGAACAACGTCAGTCACACCCGTCAACAGCAATGTTGGCGGGTGTGGCGTTTT ACAAGCGCCTTGCGTTACGC
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 583; Mature: 583
Protein sequence:
>583_residues MKRLFVSFVLICSLVIIFSAPNPSFGQSRTPAKPVDRVDFAAPAVAGQFVVKFKATTSKANRSSALKALGAVQIDRIAAL DAEVIEVASLKSNDTLAGREAVLAGLKQNPNVEYAEPNFIYNVNFTPNDPSQSSQWAWGVIRAYTGWDITQGSSSVVIAV VDTGVQGTHPDLDAKMVAGYDYIDNDSTPTDGNGHGTHVAGTSAAETNNSTGGAGTCPNCKVMPVRVLGNDGSGTLAGVA NGITYAADNGAKVINLSLGGGGSTALQNAVDYAWGRGVFLACAAGNSNTSSTTSSYPAAYTNCFAIASTTSSDARSSFSN YGSWVEVAAPGSSIYSTWINSGYNTINGTSMATPHVAGLAGLLASQGLTNSQIRDRICSTSDRITGTGSTWTCGRINVYN AVNNGGSTPTPTPPTSTPNPTTPTVVPPTATPPPGGGSIVNGGFESGTTGWTQASSGGYNVIDTTRPRTGSYSVYMGGYN NASEGIYQTLTVPAGKSLSFYWYQTTAEGSTTAYDYLRVRVYNTSGTLLGTLATRSNVNTKNAWVAESLSLAAYAGQTVR IRFETTTDSSLITSFFVDDVSLQ
Sequences:
>Translated_583_residues MKRLFVSFVLICSLVIIFSAPNPSFGQSRTPAKPVDRVDFAAPAVAGQFVVKFKATTSKANRSSALKALGAVQIDRIAAL DAEVIEVASLKSNDTLAGREAVLAGLKQNPNVEYAEPNFIYNVNFTPNDPSQSSQWAWGVIRAYTGWDITQGSSSVVIAV VDTGVQGTHPDLDAKMVAGYDYIDNDSTPTDGNGHGTHVAGTSAAETNNSTGGAGTCPNCKVMPVRVLGNDGSGTLAGVA NGITYAADNGAKVINLSLGGGGSTALQNAVDYAWGRGVFLACAAGNSNTSSTTSSYPAAYTNCFAIASTTSSDARSSFSN YGSWVEVAAPGSSIYSTWINSGYNTINGTSMATPHVAGLAGLLASQGLTNSQIRDRICSTSDRITGTGSTWTCGRINVYN AVNNGGSTPTPTPPTSTPNPTTPTVVPPTATPPPGGGSIVNGGFESGTTGWTQASSGGYNVIDTTRPRTGSYSVYMGGYN NASEGIYQTLTVPAGKSLSFYWYQTTAEGSTTAYDYLRVRVYNTSGTLLGTLATRSNVNTKNAWVAESLSLAAYAGQTVR IRFETTTDSSLITSFFVDDVSLQ >Mature_583_residues MKRLFVSFVLICSLVIIFSAPNPSFGQSRTPAKPVDRVDFAAPAVAGQFVVKFKATTSKANRSSALKALGAVQIDRIAAL DAEVIEVASLKSNDTLAGREAVLAGLKQNPNVEYAEPNFIYNVNFTPNDPSQSSQWAWGVIRAYTGWDITQGSSSVVIAV VDTGVQGTHPDLDAKMVAGYDYIDNDSTPTDGNGHGTHVAGTSAAETNNSTGGAGTCPNCKVMPVRVLGNDGSGTLAGVA NGITYAADNGAKVINLSLGGGGSTALQNAVDYAWGRGVFLACAAGNSNTSSTTSSYPAAYTNCFAIASTTSSDARSSFSN YGSWVEVAAPGSSIYSTWINSGYNTINGTSMATPHVAGLAGLLASQGLTNSQIRDRICSTSDRITGTGSTWTCGRINVYN AVNNGGSTPTPTPPTSTPNPTTPTVVPPTATPPPGGGSIVNGGFESGTTGWTQASSGGYNVIDTTRPRTGSYSVYMGGYN NASEGIYQTLTVPAGKSLSFYWYQTTAEGSTTAYDYLRVRVYNTSGTLLGTLATRSNVNTKNAWVAESLSLAAYAGQTVR IRFETTTDSSLITSFFVDDVSLQ
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI4506775, Length=428, Percent_Identity=22.4299065420561, Blast_Score=72, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320775, Length=285, Percent_Identity=37.1929824561403, Blast_Score=142, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6324576, Length=291, Percent_Identity=31.6151202749141, Blast_Score=117, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6319893, Length=277, Percent_Identity=31.4079422382672, Blast_Score=109, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 60540; Mature: 60540
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS00136 SUBTILASE_ASP ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLFVSFVLICSLVIIFSAPNPSFGQSRTPAKPVDRVDFAAPAVAGQFVVKFKATTSKA CHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCC NRSSALKALGAVQIDRIAALDAEVIEVASLKSNDTLAGREAVLAGLKQNPNVEYAEPNFI CHHHHHHHHCCCEEHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEECCCCEE YNVNFTPNDPSQSSQWAWGVIRAYTGWDITQGSSSVVIAVVDTGVQGTHPDLDAKMVAGY EEEEECCCCCCCCCCCEEEEEEEECCCEEECCCCCEEEEEEECCCCCCCCCCCCEEEECC DYIDNDSTPTDGNGHGTHVAGTSAAETNNSTGGAGTCPNCKVMPVRVLGNDGSGTLAGVA EEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECC NGITYAADNGAKVINLSLGGGGSTALQNAVDYAWGRGVFLACAAGNSNTSSTTSSYPAAY CCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHH TNCFAIASTTSSDARSSFSNYGSWVEVAAPGSSIYSTWINSGYNTINGTSMATPHVAGLA HEEEEEEECCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHH GLLASQGLTNSQIRDRICSTSDRITGTGSTWTCGRINVYNAVNNGGSTPTPTPPTSTPNP HHHHHCCCCHHHHHHHHHCCCCCEEECCCEEECCEEEEEEEECCCCCCCCCCCCCCCCCC TTPTVVPPTATPPPGGGSIVNGGFESGTTGWTQASSGGYNVIDTTRPRTGSYSVYMGGYN CCCEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCC NASEGIYQTLTVPAGKSLSFYWYQTTAEGSTTAYDYLRVRVYNTSGTLLGTLATRSNVNT CCCCCEEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCC KNAWVAESLSLAAYAGQTVRIRFETTTDSSLITSFFVDDVSLQ CCCCHHHHCEEEEECCCEEEEEEECCCCCHHHHHHHHCCCCCC >Mature Secondary Structure MKRLFVSFVLICSLVIIFSAPNPSFGQSRTPAKPVDRVDFAAPAVAGQFVVKFKATTSKA CHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCC NRSSALKALGAVQIDRIAALDAEVIEVASLKSNDTLAGREAVLAGLKQNPNVEYAEPNFI CHHHHHHHHCCCEEHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEECCCCEE YNVNFTPNDPSQSSQWAWGVIRAYTGWDITQGSSSVVIAVVDTGVQGTHPDLDAKMVAGY EEEEECCCCCCCCCCCEEEEEEEECCCEEECCCCCEEEEEEECCCCCCCCCCCCEEEECC DYIDNDSTPTDGNGHGTHVAGTSAAETNNSTGGAGTCPNCKVMPVRVLGNDGSGTLAGVA EEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECC NGITYAADNGAKVINLSLGGGGSTALQNAVDYAWGRGVFLACAAGNSNTSSTTSSYPAAY CCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHH TNCFAIASTTSSDARSSFSNYGSWVEVAAPGSSIYSTWINSGYNTINGTSMATPHVAGLA HEEEEEEECCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHH GLLASQGLTNSQIRDRICSTSDRITGTGSTWTCGRINVYNAVNNGGSTPTPTPPTSTPNP HHHHHCCCCHHHHHHHHHCCCCCEEECCCEEECCEEEEEEEECCCCCCCCCCCCCCCCCC TTPTVVPPTATPPPGGGSIVNGGFESGTTGWTQASSGGYNVIDTTRPRTGSYSVYMGGYN CCCEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCC NASEGIYQTLTVPAGKSLSFYWYQTTAEGSTTAYDYLRVRVYNTSGTLLGTLATRSNVNT CCCCCEEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCC KNAWVAESLSLAAYAGQTVRIRFETTTDSSLITSFFVDDVSLQ CCCCHHHHCEEEEECCCEEEEEEECCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]