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The map label for this gene is xynC [H]

Identifier: 159899779

GI number: 159899779

Start: 4123555

End: 4124154

Strand: Reverse

Name: xynC [H]

Synonym: Haur_3261

Alternate gene names: 159899779

Gene position: 4124154-4123555 (Counterclockwise)

Preceding gene: 159899782

Following gene: 159899778

Centisome position: 64.98

GC content: 50.17

Gene sequence:

>600_bases
TTGGATTATACAAATATTCGGCAATATATTGCTGCGACGCGCTTAATTGTGGTAATGCCGCATTGTGGGCGCTCATTTTA
TGCCAACGGCCTTGGTGGCCAGCAGATTGAGGAGTTTCTCGCCGCTGAGTTGCCTCAATTGATTGATGCTCAGTATACGA
CAATCAGGCAACGTGAGGGCCGTGCAATTGGCGGCGTTTCAATGGGTGGCTATGGAGCGCTGCGCTTGGGATTGCGCTAT
CCGCAGCATTGGAGCGCCGTTTTTAGCCATAGTGGGGCAGTTGATGCCCCGCGCTGGATCGACGATCCCTCGAATATGGT
GATTTTCGGACCAGTCGATAGCCCCATTCGCCAAGAATATAGCCTCTTTCGGATGCTTGAACAATTGGTCGTGCCGATTC
CGGCGATGCATTTTGATTGTGGAATTGACGATTTTTTGGTTGAGGAGAATCGCTTGTTTCATCATGCGCTGCGCCAACAG
CATATTCCGCATATCTATCGCGAACGTCCAGGCGGCCATACGTGGCGTTATTGTGATGAAAATTTAGCGGCTAGTCTGAG
TTGGGTTTGCCAACAACTCGATCTAGCAAATCAAGCCTAA

Upstream 100 bases:

>100_bases
GCCGATCGCAGTGCTTGTACCGCCCGACCATTCAGCCGACGGGCCTGCCTGTCCGGTCGTAACCTTGCTCCACGGGTTGT
CAGATAGTTATATGTGCTGG

Downstream 100 bases:

>100_bases
ATCTACTTGTAATGATTCATAGCATTAGCAAGTGGTTCTAACCATCCTGTACGGATCAGGTACATCGTCGGTGAATCCAT
CCACATCGTCGGTATGGTCA

Product: putative esterase

Products: NA

Alternate protein names: Acetylxylosidase [H]

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MDYTNIRQYIAATRLIVVMPHCGRSFYANGLGGQQIEEFLAAELPQLIDAQYTTIRQREGRAIGGVSMGGYGALRLGLRY
PQHWSAVFSHSGAVDAPRWIDDPSNMVIFGPVDSPIRQEYSLFRMLEQLVVPIPAMHFDCGIDDFLVEENRLFHHALRQQ
HIPHIYRERPGGHTWRYCDENLAASLSWVCQQLDLANQA

Sequences:

>Translated_199_residues
MDYTNIRQYIAATRLIVVMPHCGRSFYANGLGGQQIEEFLAAELPQLIDAQYTTIRQREGRAIGGVSMGGYGALRLGLRY
PQHWSAVFSHSGAVDAPRWIDDPSNMVIFGPVDSPIRQEYSLFRMLEQLVVPIPAMHFDCGIDDFLVEENRLFHHALRQQ
HIPHIYRERPGGHTWRYCDENLAASLSWVCQQLDLANQA
>Mature_199_residues
MDYTNIRQYIAATRLIVVMPHCGRSFYANGLGGQQIEEFLAAELPQLIDAQYTTIRQREGRAIGGVSMGGYGALRLGLRY
PQHWSAVFSHSGAVDAPRWIDDPSNMVIFGPVDSPIRQEYSLFRMLEQLVVPIPAMHFDCGIDDFLVEENRLFHHALRQQ
HIPHIYRERPGGHTWRYCDENLAASLSWVCQQLDLANQA

Specific function: Unknown

COG id: COG0627

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000801 [H]

Pfam domain/function: PF00756 Esterase [H]

EC number: NA

Molecular weight: Translated: 22655; Mature: 22655

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYTNIRQYIAATRLIVVMPHCGRSFYANGLGGQQIEEFLAAELPQLIDAQYTTIRQREG
CCHHHHHHHHHHHHHEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RAIGGVSMGGYGALRLGLRYPQHWSAVFSHSGAVDAPRWIDDPSNMVIFGPVDSPIRQEY
CEECCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHH
SLFRMLEQLVVPIPAMHFDCGIDDFLVEENRLFHHALRQQHIPHIYRERPGGHTWRYCDE
HHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHH
NLAASLSWVCQQLDLANQA
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDYTNIRQYIAATRLIVVMPHCGRSFYANGLGGQQIEEFLAAELPQLIDAQYTTIRQREG
CCHHHHHHHHHHHHHEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RAIGGVSMGGYGALRLGLRYPQHWSAVFSHSGAVDAPRWIDDPSNMVIFGPVDSPIRQEY
CEECCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHH
SLFRMLEQLVVPIPAMHFDCGIDDFLVEENRLFHHALRQQHIPHIYRERPGGHTWRYCDE
HHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHH
NLAASLSWVCQQLDLANQA
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2111111 [H]