| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899678
Identifier: 159899678
GI number: 159899678
Start: 3989927
End: 3990361
Strand: Reverse
Name: 159899678
Synonym: Haur_3160
Alternate gene names: NA
Gene position: 3990361-3989927 (Counterclockwise)
Preceding gene: 159899682
Following gene: 159899676
Centisome position: 62.87
GC content: 52.41
Gene sequence:
>435_bases ATGAGTTTCACCGACAAAACCCTCGTCTGTGTCGATTGCGGGAATGACTTCGTTTTTACTGCTGGTGAACAAGAGTTTTA CGCACAAAAAGGCTTTACCAACGAACCACGTCGCTGTACTCAATGTCGTCAAAGCAAAAAACAACAGCGGAGCGAGCCAA GTAGCCGCTCATCATTTAGCCGAGATAGCAGTTTTGGTGGTGGTCGCGAGCGCAGCCGCGAGTATGGCGGTCGCGATAGT TTTGGTGGTGGTGGGCGTTCTAGCTTCGGTGGTGGCAATCGCCGCGATGCTGCTGGCCAAGCTTCACGCGAAATGTACGA TACGGTGTGTGCTGAGTGTGGGCGTACCACGACAGTGCCTTTCAAGCCAACTCAAGGCCGTCCGGTCTATTGCCGCGATT GTTTTCAAAAGCAACGAACTTCTTCACGTTGGTAG
Upstream 100 bases:
>100_bases CTGCTGCCCCACACGCAATCGGCTTCCTCGCTTGAGTTTTGCGTTGACCCGAACCCTTTCACCCCGAAATCTGGTCTTAA CCTTTTTTGGAAGGAATCCT
Downstream 100 bases:
>100_bases GGTCGGGTAGCGTAGTATAAATCTTGGTGGGGCAGCCGTTCAGTCGCCAATTGTGGCGGCTGAATTGTTTTAACCACAAT CTTGTATTCTTCACAGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSFTDKTLVCVDCGNDFVFTAGEQEFYAQKGFTNEPRRCTQCRQSKKQQRSEPSSRSSFSRDSSFGGGRERSREYGGRDS FGGGGRSSFGGGNRRDAAGQASREMYDTVCAECGRTTTVPFKPTQGRPVYCRDCFQKQRTSSRW
Sequences:
>Translated_144_residues MSFTDKTLVCVDCGNDFVFTAGEQEFYAQKGFTNEPRRCTQCRQSKKQQRSEPSSRSSFSRDSSFGGGRERSREYGGRDS FGGGGRSSFGGGNRRDAAGQASREMYDTVCAECGRTTTVPFKPTQGRPVYCRDCFQKQRTSSRW >Mature_143_residues SFTDKTLVCVDCGNDFVFTAGEQEFYAQKGFTNEPRRCTQCRQSKKQQRSEPSSRSSFSRDSSFGGGRERSREYGGRDSF GGGGRSSFGGGNRRDAAGQASREMYDTVCAECGRTTTVPFKPTQGRPVYCRDCFQKQRTSSRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16117; Mature: 15986
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTDKTLVCVDCGNDFVFTAGEQEFYAQKGFTNEPRRCTQCRQSKKQQRSEPSSRSSFS CCCCCCEEEEEECCCCEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCC RDSSFGGGRERSREYGGRDSFGGGGRSSFGGGNRRDAAGQASREMYDTVCAECGRTTTVP CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC FKPTQGRPVYCRDCFQKQRTSSRW CCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure SFTDKTLVCVDCGNDFVFTAGEQEFYAQKGFTNEPRRCTQCRQSKKQQRSEPSSRSSFS CCCCCEEEEEECCCCEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCC RDSSFGGGRERSREYGGRDSFGGGGRSSFGGGNRRDAAGQASREMYDTVCAECGRTTTVP CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC FKPTQGRPVYCRDCFQKQRTSSRW CCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA