| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is arsR [C]
Identifier: 159899513
GI number: 159899513
Start: 3781641
End: 3781937
Strand: Reverse
Name: arsR [C]
Synonym: Haur_2994
Alternate gene names: 159899513
Gene position: 3781937-3781641 (Counterclockwise)
Preceding gene: 159899514
Following gene: 159899512
Centisome position: 59.59
GC content: 50.84
Gene sequence:
>297_bases ATGACAGCGGCACTCCCAACTGAAATTCAGGCTTTTCTGCGGGCATTGGGCAACGAAACCCGCCAAACGATTTTGTTTTT GTTTGCCAACCATCAGCAACTCACGGTCGGCGAAATTGCCGAACTTGCCCAAATTGGCCAATCAACCGCCTCGGAACACC TGACCATGCTCAAACGGGCGGGCTTGTTGATTTCGACCCGCCAAGGCAAAGAGGTGATTTACCAAGCCGATACTCAGCGG ATGGTCGCCTATGCCGAGGAATTAGTGGTCTACTTAAAAACCTGTACCTACGAATAA
Upstream 100 bases:
>100_bases TGCTGCCCCTCTGGCCTTGGGATTTTTGGCTTAATCTGGAGCTTTACTTTTGATCAAAATTAGAGTATCATATCGGATAT TACCGAAATGAAGGTTGCGC
Downstream 100 bases:
>100_bases TTATTTTTTTATCAAACATATCGTTATATTCCGAAATGACGATATATTACAAGGAGCTAGCAATGCAAGCAATCGTTATT TTGGGTGGTTATGGCGTGGT
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MTAALPTEIQAFLRALGNETRQTILFLFANHQQLTVGEIAELAQIGQSTASEHLTMLKRAGLLISTRQGKEVIYQADTQR MVAYAEELVVYLKTCTYE
Sequences:
>Translated_98_residues MTAALPTEIQAFLRALGNETRQTILFLFANHQQLTVGEIAELAQIGQSTASEHLTMLKRAGLLISTRQGKEVIYQADTQR MVAYAEELVVYLKTCTYE >Mature_97_residues TAALPTEIQAFLRALGNETRQTILFLFANHQQLTVGEIAELAQIGQSTASEHLTMLKRAGLLISTRQGKEVIYQADTQRM VAYAEELVVYLKTCTYE
Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10962; Mature: 10831
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAALPTEIQAFLRALGNETRQTILFLFANHQQLTVGEIAELAQIGQSTASEHLTMLKRA CCCCCHHHHHHHHHHHCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GLLISTRQGKEVIYQADTQRMVAYAEELVVYLKTCTYE CCEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TAALPTEIQAFLRALGNETRQTILFLFANHQQLTVGEIAELAQIGQSTASEHLTMLKRA CCCCHHHHHHHHHHHCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GLLISTRQGKEVIYQADTQRMVAYAEELVVYLKTCTYE CCEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA