| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899499
Identifier: 159899499
GI number: 159899499
Start: 3760289
End: 3762613
Strand: Reverse
Name: 159899499
Synonym: Haur_2980
Alternate gene names: NA
Gene position: 3762613-3760289 (Counterclockwise)
Preceding gene: 159899500
Following gene: 159899498
Centisome position: 59.29
GC content: 52.09
Gene sequence:
>2325_bases ATGATGAGCCGACGTGCTGGAATGTTAATTATTGCCATTCTCAGTTTGGCGCTGCTGGTTGGCTTGATTGGCTATGCCTT GTTGGTGCAGCCAGTTGTCGCCCAACTTTCACCAACGCCACCAACCCTCTTTACCCAGTTGCAATACCCTTTCAATCAGA GTTTGATTCCAGTGGGCAAAGTGCTGACGGTGCATTCGCGCTCGTGGGGCAGCCAGCCGATTGAGAACGTCGAATTATGG GCTGATGGTCAGCCATGGGCGCTGCAAGCAGCCAATAATGCAACGCTATACGAAGGCTTATTTGCTTGGCAATCTCTTGG CTTGGGCGACCACAGTTTGGTTGCTCGCACCAACGATACCAGCAAAATTCCCTCAACTTCGGCGATTGTGCGCTTGAATG CTGTGATGCCATATGAGCCTGTTGCGACCTTCCAAGTGCAACAGTCAGCAGGTGAAAGCCTGGAAAGCCTGAGCAAAGCC TTTGACGTTGCGCCCCAAACTCTGCTGAAGCTCAACCCACAGCTTGGCAATTTGCCCTTGAACCAGCCCTTGGGCAGCGA TCAATCGATTACGATTCAGTTGGCTGGTCAATTTACCCCCATCAGCACTACCACCAGCCTGAGCGCGACTCAAACGCCAC TTCCGGCTGATGTTGCCAATTTGCCGTTGGCTACACCCTACGACCCCAATGCAATCTGGTTTGATTTGCAGCGCCGTTTT GGCACAGCCAATGTGCCGTTAGCTCCTGAGGCGCTGGTTGGCAGCAGCAATTGCCAAACCCAGTTGGTGTTTACGCCCAC ATCAGATGATGCTGATGGCTTTTTTATCTATCGGGCTGGGCCAACGCAAAACCATTTTGAGTTGGTGGCAACCGTTGCCG CCAATGGTTCTGGCCCACAGCTTTGGCAAGAACCAGCCGATTTTGGCCAAACGCTCTATTATGTGGTGGCGTTTAATCCA GCTGGGGCAGCGGCTAGCCCAGTGGTGGCACTAGAGAATGCTGATTCGGCTTGTGCCACGTTGCAAGTGCCTCAATTTGC CAGTTTGCTGCTCACGCCAAAAATAGCCGTCAGCGATGTTTATTGTTATAGCTCGTTAGCAAACGGCCCATGGCAACGAG TGCCCAATCAAGGCTTTTTGCTGCCAATTGCTGGCGGCTACGATTTAGCCAGCGCTTTACCACTAACCGCGATCAGCGCC AGCCAAACTTGGAATTTGGAATGCTGGGGCTGGAATGGCACGCAGCCACAATTATTGGGCAACACCAGCACCACATTAAG TCTTGGGCAGGAGCAAATAATTGCCCTCGATGCCGATTTATTCAGTTTGCAAGGCCAATTGAACACTAGCACCCAAATTC AGCAAGTGCCTACGCTCAGCACAATTGCGCCGCCAACCAACCTTCGCTTAACCACCGATCTTGAGGAGTGTGTGCAAGCA GCGCCGCAAGCTGATGATTTTTGGCGGACGGCTTGTAGCACCAATCTGGCGGCGGGAGCGACCGTTCTAACCTGGCAATG GAGCGAACAGGCCTGTTTTCCAAGCGCTGACGGCCAAGATTGTAGTGCCAACGCCAATCTTGAAGGCTTTCAAATTAACG ATCGCTTGGCTGGAACGCCGCTCGAATTAACCCGCGTTAATCCTGAACAACGCTTGGTGTTTTTGGCTCCACGTACCATG CCCAGCCCAACCGATGAATGTTTGAGTGTGCAAGCTTTTCGTGGTTTGGCCGTTTCGCTGGATAGTGAAGTGCTCTGTTT GCCAGCGCTTAAATTGGCAGCAGGTAGCTATACCCTCGCCCCAAGTTTGTTTAATCTGAATGCAGGCGTGGCTCAGCAAA CGGTTGGTGATGGCTGCCCAGCCTTGCCGATCAACCAAAGCCAATCAACCAGCCTGAATTATCCCTATGTCAGTAGTTTG TTGCTACTTCAGCGCAATGCTGTGGCCGAAACTGCCTGTCGGCGCTACACGGCCAGCTGGTTTGATGGCAGTGTGAGTTT TATTTTGCCGCGACTCGATCAATCAGTTGGTGGCTTAGAATTAAGTTTTAGTGTCGCAAGTCAACCTGAGCCAGCCAACG AAGCCTGCCCCGCCAGCGCCAGCCTGCAAATCGGGAGCGCTAGCCAAACAATTGATTTAGCAACTTGGCCCACGAATGGC TTGGTTACAGTTGCTGTTGATCAAGCCTTGCTCGAACAAATTGGGCAATCGAATGACCCCAAATTGAACTTTACACTTCA AGCCGAGCGCCAACTTGCCAATCGCAACCAACGTTGCAGTAGCGAGCTAGGCGATTTTTCATTGAAACTAACGGTGCAAC CATGA
Upstream 100 bases:
>100_bases CATCGGTGATCCGACGCTGCGCAACTTCACGATCTGACCAGCGTCTTTACGTATAACCGTTTGGGGTGCAGCTATGGCTG GGCTTCAACGGGAGGTAGTT
Downstream 100 bases:
>100_bases AACGATGGCTTGGAATTTTGTTAATTGGCCTCTTGGGTGCTTGCCAACAGCAACCAGCAGCCGCACCAAGTCAAGCCCAA ATTATGCCTCAAGTGTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 774; Mature: 774
Protein sequence:
>774_residues MMSRRAGMLIIAILSLALLVGLIGYALLVQPVVAQLSPTPPTLFTQLQYPFNQSLIPVGKVLTVHSRSWGSQPIENVELW ADGQPWALQAANNATLYEGLFAWQSLGLGDHSLVARTNDTSKIPSTSAIVRLNAVMPYEPVATFQVQQSAGESLESLSKA FDVAPQTLLKLNPQLGNLPLNQPLGSDQSITIQLAGQFTPISTTTSLSATQTPLPADVANLPLATPYDPNAIWFDLQRRF GTANVPLAPEALVGSSNCQTQLVFTPTSDDADGFFIYRAGPTQNHFELVATVAANGSGPQLWQEPADFGQTLYYVVAFNP AGAAASPVVALENADSACATLQVPQFASLLLTPKIAVSDVYCYSSLANGPWQRVPNQGFLLPIAGGYDLASALPLTAISA SQTWNLECWGWNGTQPQLLGNTSTTLSLGQEQIIALDADLFSLQGQLNTSTQIQQVPTLSTIAPPTNLRLTTDLEECVQA APQADDFWRTACSTNLAAGATVLTWQWSEQACFPSADGQDCSANANLEGFQINDRLAGTPLELTRVNPEQRLVFLAPRTM PSPTDECLSVQAFRGLAVSLDSEVLCLPALKLAAGSYTLAPSLFNLNAGVAQQTVGDGCPALPINQSQSTSLNYPYVSSL LLLQRNAVAETACRRYTASWFDGSVSFILPRLDQSVGGLELSFSVASQPEPANEACPASASLQIGSASQTIDLATWPTNG LVTVAVDQALLEQIGQSNDPKLNFTLQAERQLANRNQRCSSELGDFSLKLTVQP
Sequences:
>Translated_774_residues MMSRRAGMLIIAILSLALLVGLIGYALLVQPVVAQLSPTPPTLFTQLQYPFNQSLIPVGKVLTVHSRSWGSQPIENVELW ADGQPWALQAANNATLYEGLFAWQSLGLGDHSLVARTNDTSKIPSTSAIVRLNAVMPYEPVATFQVQQSAGESLESLSKA FDVAPQTLLKLNPQLGNLPLNQPLGSDQSITIQLAGQFTPISTTTSLSATQTPLPADVANLPLATPYDPNAIWFDLQRRF GTANVPLAPEALVGSSNCQTQLVFTPTSDDADGFFIYRAGPTQNHFELVATVAANGSGPQLWQEPADFGQTLYYVVAFNP AGAAASPVVALENADSACATLQVPQFASLLLTPKIAVSDVYCYSSLANGPWQRVPNQGFLLPIAGGYDLASALPLTAISA SQTWNLECWGWNGTQPQLLGNTSTTLSLGQEQIIALDADLFSLQGQLNTSTQIQQVPTLSTIAPPTNLRLTTDLEECVQA APQADDFWRTACSTNLAAGATVLTWQWSEQACFPSADGQDCSANANLEGFQINDRLAGTPLELTRVNPEQRLVFLAPRTM PSPTDECLSVQAFRGLAVSLDSEVLCLPALKLAAGSYTLAPSLFNLNAGVAQQTVGDGCPALPINQSQSTSLNYPYVSSL LLLQRNAVAETACRRYTASWFDGSVSFILPRLDQSVGGLELSFSVASQPEPANEACPASASLQIGSASQTIDLATWPTNG LVTVAVDQALLEQIGQSNDPKLNFTLQAERQLANRNQRCSSELGDFSLKLTVQP >Mature_774_residues MMSRRAGMLIIAILSLALLVGLIGYALLVQPVVAQLSPTPPTLFTQLQYPFNQSLIPVGKVLTVHSRSWGSQPIENVELW ADGQPWALQAANNATLYEGLFAWQSLGLGDHSLVARTNDTSKIPSTSAIVRLNAVMPYEPVATFQVQQSAGESLESLSKA FDVAPQTLLKLNPQLGNLPLNQPLGSDQSITIQLAGQFTPISTTTSLSATQTPLPADVANLPLATPYDPNAIWFDLQRRF GTANVPLAPEALVGSSNCQTQLVFTPTSDDADGFFIYRAGPTQNHFELVATVAANGSGPQLWQEPADFGQTLYYVVAFNP AGAAASPVVALENADSACATLQVPQFASLLLTPKIAVSDVYCYSSLANGPWQRVPNQGFLLPIAGGYDLASALPLTAISA SQTWNLECWGWNGTQPQLLGNTSTTLSLGQEQIIALDADLFSLQGQLNTSTQIQQVPTLSTIAPPTNLRLTTDLEECVQA APQADDFWRTACSTNLAAGATVLTWQWSEQACFPSADGQDCSANANLEGFQINDRLAGTPLELTRVNPEQRLVFLAPRTM PSPTDECLSVQAFRGLAVSLDSEVLCLPALKLAAGSYTLAPSLFNLNAGVAQQTVGDGCPALPINQSQSTSLNYPYVSSL LLLQRNAVAETACRRYTASWFDGSVSFILPRLDQSVGGLELSFSVASQPEPANEACPASASLQIGSASQTIDLATWPTNG LVTVAVDQALLEQIGQSNDPKLNFTLQAERQLANRNQRCSSELGDFSLKLTVQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82554; Mature: 82554
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSRRAGMLIIAILSLALLVGLIGYALLVQPVVAQLSPTPPTLFTQLQYPFNQSLIPVGK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCCCCCCE VLTVHSRSWGSQPIENVELWADGQPWALQAANNATLYEGLFAWQSLGLGDHSLVARTNDT EEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCC SKIPSTSAIVRLNAVMPYEPVATFQVQQSAGESLESLSKAFDVAPQTLLKLNPQLGNLPL CCCCCCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHEECCCCCCCCC NQPLGSDQSITIQLAGQFTPISTTTSLSATQTPLPADVANLPLATPYDPNAIWFDLQRRF CCCCCCCCEEEEEEECCEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEHHHC GTANVPLAPEALVGSSNCQTQLVFTPTSDDADGFFIYRAGPTQNHFELVATVAANGSGPQ CCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCH LWQEPADFGQTLYYVVAFNPAGAAASPVVALENADSACATLQVPQFASLLLTPKIAVSDV HHCCHHHCCCEEEEEEEECCCCCCCCCEEEEECCCCCEEEEECCHHHHHHCCCCHHHHHH YCYSSLANGPWQRVPNQGFLLPIAGGYDLASALPLTAISASQTWNLECWGWNGTQPQLLG HHHHHHCCCCHHHCCCCCEEEEECCCCCHHHCCCEEEEECCCEEEEEEECCCCCCCCEEC NTSTTLSLGQEQIIALDADLFSLQGQLNTSTQIQQVPTLSTIAPPTNLRLTTDLEECVQA CCCCEEECCCCEEEEEECHHEEECCCCCCCCHHHHCCCCHHCCCCCCEEEECCHHHHHHH APQADDFWRTACSTNLAAGATVLTWQWSEQACFPSADGQDCSANANLEGFQINDRLAGTP CCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC LELTRVNPEQRLVFLAPRTMPSPTDECLSVQAFRGLAVSLDSEVLCLPALKLAAGSYTLA EEEEEECHHHEEEEEECCCCCCCHHHHHHHHHHCCEEEECCCCEEEEHHHHHCCCCEEEC PSLFNLNAGVAQQTVGDGCPALPINQSQSTSLNYPYVSSLLLLQRNAVAETACRRYTASW CCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FDGSVSFILPRLDQSVGGLELSFSVASQPEPANEACPASASLQIGSASQTIDLATWPTNG CCCCCEEEEEHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCC LVTVAVDQALLEQIGQSNDPKLNFTLQAERQLANRNQRCSSELGDFSLKLTVQP EEEEEHHHHHHHHHCCCCCCEEEEEEEHHHHHHCCCHHHHHCCCCEEEEEEECC >Mature Secondary Structure MMSRRAGMLIIAILSLALLVGLIGYALLVQPVVAQLSPTPPTLFTQLQYPFNQSLIPVGK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCCCCCCE VLTVHSRSWGSQPIENVELWADGQPWALQAANNATLYEGLFAWQSLGLGDHSLVARTNDT EEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCC SKIPSTSAIVRLNAVMPYEPVATFQVQQSAGESLESLSKAFDVAPQTLLKLNPQLGNLPL CCCCCCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHEECCCCCCCCC NQPLGSDQSITIQLAGQFTPISTTTSLSATQTPLPADVANLPLATPYDPNAIWFDLQRRF CCCCCCCCEEEEEEECCEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEHHHC GTANVPLAPEALVGSSNCQTQLVFTPTSDDADGFFIYRAGPTQNHFELVATVAANGSGPQ CCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCH LWQEPADFGQTLYYVVAFNPAGAAASPVVALENADSACATLQVPQFASLLLTPKIAVSDV HHCCHHHCCCEEEEEEEECCCCCCCCCEEEEECCCCCEEEEECCHHHHHHCCCCHHHHHH YCYSSLANGPWQRVPNQGFLLPIAGGYDLASALPLTAISASQTWNLECWGWNGTQPQLLG HHHHHHCCCCHHHCCCCCEEEEECCCCCHHHCCCEEEEECCCEEEEEEECCCCCCCCEEC NTSTTLSLGQEQIIALDADLFSLQGQLNTSTQIQQVPTLSTIAPPTNLRLTTDLEECVQA CCCCEEECCCCEEEEEECHHEEECCCCCCCCHHHHCCCCHHCCCCCCEEEECCHHHHHHH APQADDFWRTACSTNLAAGATVLTWQWSEQACFPSADGQDCSANANLEGFQINDRLAGTP CCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC LELTRVNPEQRLVFLAPRTMPSPTDECLSVQAFRGLAVSLDSEVLCLPALKLAAGSYTLA EEEEEECHHHEEEEEECCCCCCCHHHHHHHHHHCCEEEECCCCEEEEHHHHHCCCCEEEC PSLFNLNAGVAQQTVGDGCPALPINQSQSTSLNYPYVSSLLLLQRNAVAETACRRYTASW CCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FDGSVSFILPRLDQSVGGLELSFSVASQPEPANEACPASASLQIGSASQTIDLATWPTNG CCCCCEEEEEHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCC LVTVAVDQALLEQIGQSNDPKLNFTLQAERQLANRNQRCSSELGDFSLKLTVQP EEEEEHHHHHHHHHCCCCCCEEEEEEEHHHHHHCCCHHHHHCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA