Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899499

Identifier: 159899499

GI number: 159899499

Start: 3760289

End: 3762613

Strand: Reverse

Name: 159899499

Synonym: Haur_2980

Alternate gene names: NA

Gene position: 3762613-3760289 (Counterclockwise)

Preceding gene: 159899500

Following gene: 159899498

Centisome position: 59.29

GC content: 52.09

Gene sequence:

>2325_bases
ATGATGAGCCGACGTGCTGGAATGTTAATTATTGCCATTCTCAGTTTGGCGCTGCTGGTTGGCTTGATTGGCTATGCCTT
GTTGGTGCAGCCAGTTGTCGCCCAACTTTCACCAACGCCACCAACCCTCTTTACCCAGTTGCAATACCCTTTCAATCAGA
GTTTGATTCCAGTGGGCAAAGTGCTGACGGTGCATTCGCGCTCGTGGGGCAGCCAGCCGATTGAGAACGTCGAATTATGG
GCTGATGGTCAGCCATGGGCGCTGCAAGCAGCCAATAATGCAACGCTATACGAAGGCTTATTTGCTTGGCAATCTCTTGG
CTTGGGCGACCACAGTTTGGTTGCTCGCACCAACGATACCAGCAAAATTCCCTCAACTTCGGCGATTGTGCGCTTGAATG
CTGTGATGCCATATGAGCCTGTTGCGACCTTCCAAGTGCAACAGTCAGCAGGTGAAAGCCTGGAAAGCCTGAGCAAAGCC
TTTGACGTTGCGCCCCAAACTCTGCTGAAGCTCAACCCACAGCTTGGCAATTTGCCCTTGAACCAGCCCTTGGGCAGCGA
TCAATCGATTACGATTCAGTTGGCTGGTCAATTTACCCCCATCAGCACTACCACCAGCCTGAGCGCGACTCAAACGCCAC
TTCCGGCTGATGTTGCCAATTTGCCGTTGGCTACACCCTACGACCCCAATGCAATCTGGTTTGATTTGCAGCGCCGTTTT
GGCACAGCCAATGTGCCGTTAGCTCCTGAGGCGCTGGTTGGCAGCAGCAATTGCCAAACCCAGTTGGTGTTTACGCCCAC
ATCAGATGATGCTGATGGCTTTTTTATCTATCGGGCTGGGCCAACGCAAAACCATTTTGAGTTGGTGGCAACCGTTGCCG
CCAATGGTTCTGGCCCACAGCTTTGGCAAGAACCAGCCGATTTTGGCCAAACGCTCTATTATGTGGTGGCGTTTAATCCA
GCTGGGGCAGCGGCTAGCCCAGTGGTGGCACTAGAGAATGCTGATTCGGCTTGTGCCACGTTGCAAGTGCCTCAATTTGC
CAGTTTGCTGCTCACGCCAAAAATAGCCGTCAGCGATGTTTATTGTTATAGCTCGTTAGCAAACGGCCCATGGCAACGAG
TGCCCAATCAAGGCTTTTTGCTGCCAATTGCTGGCGGCTACGATTTAGCCAGCGCTTTACCACTAACCGCGATCAGCGCC
AGCCAAACTTGGAATTTGGAATGCTGGGGCTGGAATGGCACGCAGCCACAATTATTGGGCAACACCAGCACCACATTAAG
TCTTGGGCAGGAGCAAATAATTGCCCTCGATGCCGATTTATTCAGTTTGCAAGGCCAATTGAACACTAGCACCCAAATTC
AGCAAGTGCCTACGCTCAGCACAATTGCGCCGCCAACCAACCTTCGCTTAACCACCGATCTTGAGGAGTGTGTGCAAGCA
GCGCCGCAAGCTGATGATTTTTGGCGGACGGCTTGTAGCACCAATCTGGCGGCGGGAGCGACCGTTCTAACCTGGCAATG
GAGCGAACAGGCCTGTTTTCCAAGCGCTGACGGCCAAGATTGTAGTGCCAACGCCAATCTTGAAGGCTTTCAAATTAACG
ATCGCTTGGCTGGAACGCCGCTCGAATTAACCCGCGTTAATCCTGAACAACGCTTGGTGTTTTTGGCTCCACGTACCATG
CCCAGCCCAACCGATGAATGTTTGAGTGTGCAAGCTTTTCGTGGTTTGGCCGTTTCGCTGGATAGTGAAGTGCTCTGTTT
GCCAGCGCTTAAATTGGCAGCAGGTAGCTATACCCTCGCCCCAAGTTTGTTTAATCTGAATGCAGGCGTGGCTCAGCAAA
CGGTTGGTGATGGCTGCCCAGCCTTGCCGATCAACCAAAGCCAATCAACCAGCCTGAATTATCCCTATGTCAGTAGTTTG
TTGCTACTTCAGCGCAATGCTGTGGCCGAAACTGCCTGTCGGCGCTACACGGCCAGCTGGTTTGATGGCAGTGTGAGTTT
TATTTTGCCGCGACTCGATCAATCAGTTGGTGGCTTAGAATTAAGTTTTAGTGTCGCAAGTCAACCTGAGCCAGCCAACG
AAGCCTGCCCCGCCAGCGCCAGCCTGCAAATCGGGAGCGCTAGCCAAACAATTGATTTAGCAACTTGGCCCACGAATGGC
TTGGTTACAGTTGCTGTTGATCAAGCCTTGCTCGAACAAATTGGGCAATCGAATGACCCCAAATTGAACTTTACACTTCA
AGCCGAGCGCCAACTTGCCAATCGCAACCAACGTTGCAGTAGCGAGCTAGGCGATTTTTCATTGAAACTAACGGTGCAAC
CATGA

Upstream 100 bases:

>100_bases
CATCGGTGATCCGACGCTGCGCAACTTCACGATCTGACCAGCGTCTTTACGTATAACCGTTTGGGGTGCAGCTATGGCTG
GGCTTCAACGGGAGGTAGTT

Downstream 100 bases:

>100_bases
AACGATGGCTTGGAATTTTGTTAATTGGCCTCTTGGGTGCTTGCCAACAGCAACCAGCAGCCGCACCAAGTCAAGCCCAA
ATTATGCCTCAAGTGTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 774; Mature: 774

Protein sequence:

>774_residues
MMSRRAGMLIIAILSLALLVGLIGYALLVQPVVAQLSPTPPTLFTQLQYPFNQSLIPVGKVLTVHSRSWGSQPIENVELW
ADGQPWALQAANNATLYEGLFAWQSLGLGDHSLVARTNDTSKIPSTSAIVRLNAVMPYEPVATFQVQQSAGESLESLSKA
FDVAPQTLLKLNPQLGNLPLNQPLGSDQSITIQLAGQFTPISTTTSLSATQTPLPADVANLPLATPYDPNAIWFDLQRRF
GTANVPLAPEALVGSSNCQTQLVFTPTSDDADGFFIYRAGPTQNHFELVATVAANGSGPQLWQEPADFGQTLYYVVAFNP
AGAAASPVVALENADSACATLQVPQFASLLLTPKIAVSDVYCYSSLANGPWQRVPNQGFLLPIAGGYDLASALPLTAISA
SQTWNLECWGWNGTQPQLLGNTSTTLSLGQEQIIALDADLFSLQGQLNTSTQIQQVPTLSTIAPPTNLRLTTDLEECVQA
APQADDFWRTACSTNLAAGATVLTWQWSEQACFPSADGQDCSANANLEGFQINDRLAGTPLELTRVNPEQRLVFLAPRTM
PSPTDECLSVQAFRGLAVSLDSEVLCLPALKLAAGSYTLAPSLFNLNAGVAQQTVGDGCPALPINQSQSTSLNYPYVSSL
LLLQRNAVAETACRRYTASWFDGSVSFILPRLDQSVGGLELSFSVASQPEPANEACPASASLQIGSASQTIDLATWPTNG
LVTVAVDQALLEQIGQSNDPKLNFTLQAERQLANRNQRCSSELGDFSLKLTVQP

Sequences:

>Translated_774_residues
MMSRRAGMLIIAILSLALLVGLIGYALLVQPVVAQLSPTPPTLFTQLQYPFNQSLIPVGKVLTVHSRSWGSQPIENVELW
ADGQPWALQAANNATLYEGLFAWQSLGLGDHSLVARTNDTSKIPSTSAIVRLNAVMPYEPVATFQVQQSAGESLESLSKA
FDVAPQTLLKLNPQLGNLPLNQPLGSDQSITIQLAGQFTPISTTTSLSATQTPLPADVANLPLATPYDPNAIWFDLQRRF
GTANVPLAPEALVGSSNCQTQLVFTPTSDDADGFFIYRAGPTQNHFELVATVAANGSGPQLWQEPADFGQTLYYVVAFNP
AGAAASPVVALENADSACATLQVPQFASLLLTPKIAVSDVYCYSSLANGPWQRVPNQGFLLPIAGGYDLASALPLTAISA
SQTWNLECWGWNGTQPQLLGNTSTTLSLGQEQIIALDADLFSLQGQLNTSTQIQQVPTLSTIAPPTNLRLTTDLEECVQA
APQADDFWRTACSTNLAAGATVLTWQWSEQACFPSADGQDCSANANLEGFQINDRLAGTPLELTRVNPEQRLVFLAPRTM
PSPTDECLSVQAFRGLAVSLDSEVLCLPALKLAAGSYTLAPSLFNLNAGVAQQTVGDGCPALPINQSQSTSLNYPYVSSL
LLLQRNAVAETACRRYTASWFDGSVSFILPRLDQSVGGLELSFSVASQPEPANEACPASASLQIGSASQTIDLATWPTNG
LVTVAVDQALLEQIGQSNDPKLNFTLQAERQLANRNQRCSSELGDFSLKLTVQP
>Mature_774_residues
MMSRRAGMLIIAILSLALLVGLIGYALLVQPVVAQLSPTPPTLFTQLQYPFNQSLIPVGKVLTVHSRSWGSQPIENVELW
ADGQPWALQAANNATLYEGLFAWQSLGLGDHSLVARTNDTSKIPSTSAIVRLNAVMPYEPVATFQVQQSAGESLESLSKA
FDVAPQTLLKLNPQLGNLPLNQPLGSDQSITIQLAGQFTPISTTTSLSATQTPLPADVANLPLATPYDPNAIWFDLQRRF
GTANVPLAPEALVGSSNCQTQLVFTPTSDDADGFFIYRAGPTQNHFELVATVAANGSGPQLWQEPADFGQTLYYVVAFNP
AGAAASPVVALENADSACATLQVPQFASLLLTPKIAVSDVYCYSSLANGPWQRVPNQGFLLPIAGGYDLASALPLTAISA
SQTWNLECWGWNGTQPQLLGNTSTTLSLGQEQIIALDADLFSLQGQLNTSTQIQQVPTLSTIAPPTNLRLTTDLEECVQA
APQADDFWRTACSTNLAAGATVLTWQWSEQACFPSADGQDCSANANLEGFQINDRLAGTPLELTRVNPEQRLVFLAPRTM
PSPTDECLSVQAFRGLAVSLDSEVLCLPALKLAAGSYTLAPSLFNLNAGVAQQTVGDGCPALPINQSQSTSLNYPYVSSL
LLLQRNAVAETACRRYTASWFDGSVSFILPRLDQSVGGLELSFSVASQPEPANEACPASASLQIGSASQTIDLATWPTNG
LVTVAVDQALLEQIGQSNDPKLNFTLQAERQLANRNQRCSSELGDFSLKLTVQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82554; Mature: 82554

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSRRAGMLIIAILSLALLVGLIGYALLVQPVVAQLSPTPPTLFTQLQYPFNQSLIPVGK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCCCCCCE
VLTVHSRSWGSQPIENVELWADGQPWALQAANNATLYEGLFAWQSLGLGDHSLVARTNDT
EEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCC
SKIPSTSAIVRLNAVMPYEPVATFQVQQSAGESLESLSKAFDVAPQTLLKLNPQLGNLPL
CCCCCCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHEECCCCCCCCC
NQPLGSDQSITIQLAGQFTPISTTTSLSATQTPLPADVANLPLATPYDPNAIWFDLQRRF
CCCCCCCCEEEEEEECCEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEHHHC
GTANVPLAPEALVGSSNCQTQLVFTPTSDDADGFFIYRAGPTQNHFELVATVAANGSGPQ
CCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCH
LWQEPADFGQTLYYVVAFNPAGAAASPVVALENADSACATLQVPQFASLLLTPKIAVSDV
HHCCHHHCCCEEEEEEEECCCCCCCCCEEEEECCCCCEEEEECCHHHHHHCCCCHHHHHH
YCYSSLANGPWQRVPNQGFLLPIAGGYDLASALPLTAISASQTWNLECWGWNGTQPQLLG
HHHHHHCCCCHHHCCCCCEEEEECCCCCHHHCCCEEEEECCCEEEEEEECCCCCCCCEEC
NTSTTLSLGQEQIIALDADLFSLQGQLNTSTQIQQVPTLSTIAPPTNLRLTTDLEECVQA
CCCCEEECCCCEEEEEECHHEEECCCCCCCCHHHHCCCCHHCCCCCCEEEECCHHHHHHH
APQADDFWRTACSTNLAAGATVLTWQWSEQACFPSADGQDCSANANLEGFQINDRLAGTP
CCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
LELTRVNPEQRLVFLAPRTMPSPTDECLSVQAFRGLAVSLDSEVLCLPALKLAAGSYTLA
EEEEEECHHHEEEEEECCCCCCCHHHHHHHHHHCCEEEECCCCEEEEHHHHHCCCCEEEC
PSLFNLNAGVAQQTVGDGCPALPINQSQSTSLNYPYVSSLLLLQRNAVAETACRRYTASW
CCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FDGSVSFILPRLDQSVGGLELSFSVASQPEPANEACPASASLQIGSASQTIDLATWPTNG
CCCCCEEEEEHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCC
LVTVAVDQALLEQIGQSNDPKLNFTLQAERQLANRNQRCSSELGDFSLKLTVQP
EEEEEHHHHHHHHHCCCCCCEEEEEEEHHHHHHCCCHHHHHCCCCEEEEEEECC
>Mature Secondary Structure
MMSRRAGMLIIAILSLALLVGLIGYALLVQPVVAQLSPTPPTLFTQLQYPFNQSLIPVGK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCCCCCCE
VLTVHSRSWGSQPIENVELWADGQPWALQAANNATLYEGLFAWQSLGLGDHSLVARTNDT
EEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCC
SKIPSTSAIVRLNAVMPYEPVATFQVQQSAGESLESLSKAFDVAPQTLLKLNPQLGNLPL
CCCCCCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHEECCCCCCCCC
NQPLGSDQSITIQLAGQFTPISTTTSLSATQTPLPADVANLPLATPYDPNAIWFDLQRRF
CCCCCCCCEEEEEEECCEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEHHHC
GTANVPLAPEALVGSSNCQTQLVFTPTSDDADGFFIYRAGPTQNHFELVATVAANGSGPQ
CCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCH
LWQEPADFGQTLYYVVAFNPAGAAASPVVALENADSACATLQVPQFASLLLTPKIAVSDV
HHCCHHHCCCEEEEEEEECCCCCCCCCEEEEECCCCCEEEEECCHHHHHHCCCCHHHHHH
YCYSSLANGPWQRVPNQGFLLPIAGGYDLASALPLTAISASQTWNLECWGWNGTQPQLLG
HHHHHHCCCCHHHCCCCCEEEEECCCCCHHHCCCEEEEECCCEEEEEEECCCCCCCCEEC
NTSTTLSLGQEQIIALDADLFSLQGQLNTSTQIQQVPTLSTIAPPTNLRLTTDLEECVQA
CCCCEEECCCCEEEEEECHHEEECCCCCCCCHHHHCCCCHHCCCCCCEEEECCHHHHHHH
APQADDFWRTACSTNLAAGATVLTWQWSEQACFPSADGQDCSANANLEGFQINDRLAGTP
CCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
LELTRVNPEQRLVFLAPRTMPSPTDECLSVQAFRGLAVSLDSEVLCLPALKLAAGSYTLA
EEEEEECHHHEEEEEECCCCCCCHHHHHHHHHHCCEEEECCCCEEEEHHHHHCCCCEEEC
PSLFNLNAGVAQQTVGDGCPALPINQSQSTSLNYPYVSSLLLLQRNAVAETACRRYTASW
CCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FDGSVSFILPRLDQSVGGLELSFSVASQPEPANEACPASASLQIGSASQTIDLATWPTNG
CCCCCEEEEEHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCC
LVTVAVDQALLEQIGQSNDPKLNFTLQAERQLANRNQRCSSELGDFSLKLTVQP
EEEEEHHHHHHHHHCCCCCCEEEEEEEHHHHHHCCCHHHHHCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA