| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899371
Identifier: 159899371
GI number: 159899371
Start: 3619904
End: 3620509
Strand: Reverse
Name: 159899371
Synonym: Haur_2852
Alternate gene names: NA
Gene position: 3620509-3619904 (Counterclockwise)
Preceding gene: 159899374
Following gene: 159899370
Centisome position: 57.05
GC content: 52.81
Gene sequence:
>606_bases ATGGGTTACGGCTATGGCTATGCACCACCACCGCCACCACGCCGCCGCGGTTGTCTGTTTGGTTGTTTGACCACCCTGAC GATTTTTGTATTTTTGGCCTTGGGTGGCCTGTTGGGAGTTTATTTTTATTTACGGCCAATGCTCAGCGAACAAGCAGGCA ATACCTTGGGCGGCCAACTCGAACAGCAAATTGATCGCAAGCTCGATGAGCAACTTGGCGGCCCCAATAGCGAAATTCCG GCTGGTTTTCAAGGCGTAGTTCAAGTGACCGATACTGAAATCAACCAGTATATTCAGGCTAATCCCAATGAAATTAGCCC CTTGGATAGTGCGACGGTGCGTTTTACGCCAGGTCGTTTGGGCGCGACCGTTGGTGCCTATGGCATGACTGGGAGTGCCA GCGCTGGGGTGCAGGTAACCGCCGATGGCCGAATTGATGTGGTTGATGCCCAAATTGATGGCGCTCTGGGCTTTTTCCTT GATGCTGAGCAATTGGCGCAAACGCTTGAAACCAAACTCAACAGCCAATTAACCGCCAATGGCCAACGAATTACCGCAAT CGAAGTCGGCGAAGGCGTGCTCACCGCCACCGTCGAAGCCCAATAA
Upstream 100 bases:
>100_bases TAATTTGGAAATTAGGTGGAACCACGAGGTTTATGTTTGCCTTCGTCCTATGTGTGATGGACGGGGCTTTTTTGTTTAAC AGCACCACAGGAGGTTTTGT
Downstream 100 bases:
>100_bases CAGAGCATAGAACAAAGAGCATAGAACATAGGTTAGCCTATTTTGCCTTTTGATTTTTGCCTTCTGACTTATAAGAAGGG GGGTGATCGTTCTGGACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MGYGYGYAPPPPPRRRGCLFGCLTTLTIFVFLALGGLLGVYFYLRPMLSEQAGNTLGGQLEQQIDRKLDEQLGGPNSEIP AGFQGVVQVTDTEINQYIQANPNEISPLDSATVRFTPGRLGATVGAYGMTGSASAGVQVTADGRIDVVDAQIDGALGFFL DAEQLAQTLETKLNSQLTANGQRITAIEVGEGVLTATVEAQ
Sequences:
>Translated_201_residues MGYGYGYAPPPPPRRRGCLFGCLTTLTIFVFLALGGLLGVYFYLRPMLSEQAGNTLGGQLEQQIDRKLDEQLGGPNSEIP AGFQGVVQVTDTEINQYIQANPNEISPLDSATVRFTPGRLGATVGAYGMTGSASAGVQVTADGRIDVVDAQIDGALGFFL DAEQLAQTLETKLNSQLTANGQRITAIEVGEGVLTATVEAQ >Mature_200_residues GYGYGYAPPPPPRRRGCLFGCLTTLTIFVFLALGGLLGVYFYLRPMLSEQAGNTLGGQLEQQIDRKLDEQLGGPNSEIPA GFQGVVQVTDTEINQYIQANPNEISPLDSATVRFTPGRLGATVGAYGMTGSASAGVQVTADGRIDVVDAQIDGALGFFLD AEQLAQTLETKLNSQLTANGQRITAIEVGEGVLTATVEAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21201; Mature: 21070
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYGYGYAPPPPPRRRGCLFGCLTTLTIFVFLALGGLLGVYFYLRPMLSEQAGNTLGGQL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH EQQIDRKLDEQLGGPNSEIPAGFQGVVQVTDTEINQYIQANPNEISPLDSATVRFTPGRL HHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCEEEECCCHH GATVGAYGMTGSASAGVQVTADGRIDVVDAQIDGALGFFLDAEQLAQTLETKLNSQLTAN CCHHCCCCCCCCCCCCEEEEECCCEEEEEEEECCHHHHEECHHHHHHHHHHHHCCCEECC GQRITAIEVGEGVLTATVEAQ CCEEEEEEECCCEEEEEEECC >Mature Secondary Structure GYGYGYAPPPPPRRRGCLFGCLTTLTIFVFLALGGLLGVYFYLRPMLSEQAGNTLGGQL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH EQQIDRKLDEQLGGPNSEIPAGFQGVVQVTDTEINQYIQANPNEISPLDSATVRFTPGRL HHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCEEEECCCHH GATVGAYGMTGSASAGVQVTADGRIDVVDAQIDGALGFFLDAEQLAQTLETKLNSQLTAN CCHHCCCCCCCCCCCCEEEEECCCEEEEEEEECCHHHHEECHHHHHHHHHHHHCCCEECC GQRITAIEVGEGVLTATVEAQ CCEEEEEEECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA