| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899183
Identifier: 159899183
GI number: 159899183
Start: 3418202
End: 3419299
Strand: Reverse
Name: 159899183
Synonym: Haur_2664
Alternate gene names: NA
Gene position: 3419299-3418202 (Counterclockwise)
Preceding gene: 159899184
Following gene: 159899174
Centisome position: 53.88
GC content: 52.73
Gene sequence:
>1098_bases ATGAAAAAATATCTGCTTATGCTAATAATGGTCGCTGGATTGCTTGGCATTCCAGCGACCACGCTTGTTGCTCAAACCCC AACCATTGCGCCAACGCCTAGCCCGAGCACTGTTCCAGTTGTCGATTTGACCTTTGGAACTTCGTTGCAGGGGCGGGCGA TTACGGGTACGCGCTTTGGCAATGGCCCACGCAAGCTGTTTGTCGTCTCGAATACCCACGGCGGCCCCGAAGCCAATACC TATCAACTAGCCTTGGCGTTGCTTGAGCATTTTCGCCAAAACCCGCAACAAGTGCCTGCTGATGTGAGCCTCTACATTAT TCCGACGGTCAATCCTGATGGCTTGGCGATTGGCACGCGTTTCAATAGCCGCAGCGTTGATCTCAACCGCAATATGGATA CCAATTTCGATGCCTGCCCCGAAAACGACTGGAATCAAACCGTCGAGGGAGCGTATGGCATCGTTTCCGATACTGGCGGG GCATTCGTCGAATCGGAGTTGGAAAGCCAATTAGTACGTGATTTGGTGCTCGATGCTTCGGCGGTAGTTTGGGTGCATAG CGATGGTGGCGATGTGTTTCCAGCTTTTTGTGAACATGGGCCATCAATCGCCTTAGCTCAAGCCTATGCCGAAGCTAGCG GCTATCGCTACGATCGTTATTGGCGTAACTATATGATCACTGGCGGCATGCACGATTGGGCGGGTGCACTTGGCATTGCC TCGATTACCCCAGAATTATCAACGGGCGAATTGCCTGATTTCGACGAGAATTTGCGGGCAGTGCAAGCAGTCATGGGGCG TTCTGAGGAGCTATTGCCGTTGGTAACGACGACAGTGGAAGTAACCACCAACATCACCATGCCCACCTTATTATGGCGCT ATTGGCGTGCCCACGGTGGCCCTGATTTCTTTGGCCTACCGATTTCGCCTGTGGTTGAGTATCAAGGGCGGCCAACCGTC TTTTTTGCCGAGCAATATTTGAGTTTAGTGCCCGATGGGGCTGATCGCATGCAGCCTGCGCTACGTGGCGAAGGTGGTTT GGCGCTTTGGCAAGCCTATTTGCTCGATCAACAATCAACCAGCTATCAAGTGCGCTAA
Upstream 100 bases:
>100_bases CGCCAGAACCACAGCCGCCGCAACAGCCGGAGCCAACGCCTGAGCCACAACCAGAGCCAACGCCAGGTGGCGAGATTGTA GTACCAACGCCAAATCCCTA
Downstream 100 bases:
>100_bases GCGTGGCCAAACGATGATCGCGGCAATTATTAACGCCCCGATTGCCGCGATCAACACTGCACCAGCGGCTACATCCTTGG CGCGGCCAGCTAGTGGGTGA
Product: peptidase M14 carboxypeptidase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MKKYLLMLIMVAGLLGIPATTLVAQTPTIAPTPSPSTVPVVDLTFGTSLQGRAITGTRFGNGPRKLFVVSNTHGGPEANT YQLALALLEHFRQNPQQVPADVSLYIIPTVNPDGLAIGTRFNSRSVDLNRNMDTNFDACPENDWNQTVEGAYGIVSDTGG AFVESELESQLVRDLVLDASAVVWVHSDGGDVFPAFCEHGPSIALAQAYAEASGYRYDRYWRNYMITGGMHDWAGALGIA SITPELSTGELPDFDENLRAVQAVMGRSEELLPLVTTTVEVTTNITMPTLLWRYWRAHGGPDFFGLPISPVVEYQGRPTV FFAEQYLSLVPDGADRMQPALRGEGGLALWQAYLLDQQSTSYQVR
Sequences:
>Translated_365_residues MKKYLLMLIMVAGLLGIPATTLVAQTPTIAPTPSPSTVPVVDLTFGTSLQGRAITGTRFGNGPRKLFVVSNTHGGPEANT YQLALALLEHFRQNPQQVPADVSLYIIPTVNPDGLAIGTRFNSRSVDLNRNMDTNFDACPENDWNQTVEGAYGIVSDTGG AFVESELESQLVRDLVLDASAVVWVHSDGGDVFPAFCEHGPSIALAQAYAEASGYRYDRYWRNYMITGGMHDWAGALGIA SITPELSTGELPDFDENLRAVQAVMGRSEELLPLVTTTVEVTTNITMPTLLWRYWRAHGGPDFFGLPISPVVEYQGRPTV FFAEQYLSLVPDGADRMQPALRGEGGLALWQAYLLDQQSTSYQVR >Mature_365_residues MKKYLLMLIMVAGLLGIPATTLVAQTPTIAPTPSPSTVPVVDLTFGTSLQGRAITGTRFGNGPRKLFVVSNTHGGPEANT YQLALALLEHFRQNPQQVPADVSLYIIPTVNPDGLAIGTRFNSRSVDLNRNMDTNFDACPENDWNQTVEGAYGIVSDTGG AFVESELESQLVRDLVLDASAVVWVHSDGGDVFPAFCEHGPSIALAQAYAEASGYRYDRYWRNYMITGGMHDWAGALGIA SITPELSTGELPDFDENLRAVQAVMGRSEELLPLVTTTVEVTTNITMPTLLWRYWRAHGGPDFFGLPISPVVEYQGRPTV FFAEQYLSLVPDGADRMQPALRGEGGLALWQAYLLDQQSTSYQVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39834; Mature: 39834
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYLLMLIMVAGLLGIPATTLVAQTPTIAPTPSPSTVPVVDLTFGTSLQGRAITGTRFG CHHHHHHHHHHHHHHCCCHHHHEECCCCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCC NGPRKLFVVSNTHGGPEANTYQLALALLEHFRQNPQQVPADVSLYIIPTVNPDGLAIGTR CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEE FNSRSVDLNRNMDTNFDACPENDWNQTVEGAYGIVSDTGGAFVESELESQLVRDLVLDAS CCCCCEECCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCE AVVWVHSDGGDVFPAFCEHGPSIALAQAYAEASGYRYDRYWRNYMITGGMHDWAGALGIA EEEEEECCCCCCCHHHHCCCCCCHHHHHHHHHCCCCHHHHHCCEEEECCCHHHHHHCCHH SITPELSTGELPDFDENLRAVQAVMGRSEELLPLVTTTVEVTTNITMPTLLWRYWRAHGG HCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHCCC PDFFGLPISPVVEYQGRPTVFFAEQYLSLVPDGADRMQPALRGEGGLALWQAYLLDQQST CCEECCCCCHHHHCCCCCCEEEHHHHHHHCCCCHHHHCHHHCCCCCHHHHHHHHHCCCCC SYQVR CEECC >Mature Secondary Structure MKKYLLMLIMVAGLLGIPATTLVAQTPTIAPTPSPSTVPVVDLTFGTSLQGRAITGTRFG CHHHHHHHHHHHHHHCCCHHHHEECCCCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCC NGPRKLFVVSNTHGGPEANTYQLALALLEHFRQNPQQVPADVSLYIIPTVNPDGLAIGTR CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEE FNSRSVDLNRNMDTNFDACPENDWNQTVEGAYGIVSDTGGAFVESELESQLVRDLVLDAS CCCCCEECCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCE AVVWVHSDGGDVFPAFCEHGPSIALAQAYAEASGYRYDRYWRNYMITGGMHDWAGALGIA EEEEEECCCCCCCHHHHCCCCCCHHHHHHHHHCCCCHHHHHCCEEEECCCHHHHHHCCHH SITPELSTGELPDFDENLRAVQAVMGRSEELLPLVTTTVEVTTNITMPTLLWRYWRAHGG HCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHCCC PDFFGLPISPVVEYQGRPTVFFAEQYLSLVPDGADRMQPALRGEGGLALWQAYLLDQQST CCEECCCCCHHHHCCCCCCEEEHHHHHHHCCCCHHHHCHHHCCCCCHHHHHHHHHCCCCC SYQVR CEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA