| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899068
Identifier: 159899068
GI number: 159899068
Start: 3276091
End: 3277719
Strand: Reverse
Name: 159899068
Synonym: Haur_2549
Alternate gene names: NA
Gene position: 3277719-3276091 (Counterclockwise)
Preceding gene: 159899074
Following gene: 159899067
Centisome position: 51.65
GC content: 46.22
Gene sequence:
>1629_bases ATGGCACATGCAACACGGATTGGGCTAGTAACCAGTGGCTCGTTATTGGAAGGCTTAACTGCCCGTTTAGATGAACGCTA CGAAATTGAGCGTTTGCGCGTTGGTCAATTTATGGTGGTGCAAGGCCGCCAAAACCGCTTTTTTTCAATGTTGACCGATG TGCAACTGGCCGCTACCAGCCTTTCGATTTTGGCCGATCCGCCAGATGATGAGCACCCGTTGTTGCGTGAGATTTTGGCT GGGCGTAACACCTATGGCACATTTAAATTAACCCCTCAATTGATGTTGCCCGAAGATTCACTCGAAACACCTCGCCCAGT TAAGACTATTCCTGCCCATTTTGCGCCAATTTACGAGGCCAGCGAAGATGATTTTGGCTTGGTGTTTGGGGCTGAGGGCG ATGGTAAGTTTCAAATGGGCACGCCGCTGGATATGGATGTACCAGTCTGTATCGATCTTGAGCGCTTTGTTGAGCGCTCG AATGGTGTGTTTGGTAAATCGGGCACAGGTAAATCATTCTTAACGCGTTTATTATTATGCGGCGTGATTAAACATAATGC TGCGAGTAATTTGATTTTTGATATGCACTCCGAATATGGTTGGAGCGGCACAACCGAGGATAAGATTCAAGAAGTTAAGG GCTTAGCGCAGCTTTTTCCTGGCCAAGTCTATATCTACACGCTTGATCCTGAGTCGTCGCGGCGGCGCGGAGTAAAATAC GATGGTGATATTACGATTGGCCTGAATGAAATTCGGGTTGATGATATTTTATTATTGCAAGATGCGCTTAATCTCAATCC GACTGCGGCAGAATCGGCCTTTATTTGTGCTCAGCGTTTTGGCGACGATTGGATTCAAAAACTGCGTGAATTAGATACCG AACAACTCAAAGAGTTTGTCGAATCGACAGGCGCAAATATGTCGTCGATGTCAGCACTTTCGCGCAAACTAGCTCAGCTT GAGCAACTCAAATTTGTCACTCGCAAATCGAGCCAATCATCAATTCGTCAAATTATTGATGCCTTGTTGGCTGGTAAAAA TGTAGTGGTAGAGTTTGGTCAATATCGCAGTGAATTGGCCTATATGTTGGTTTCAAATATTCTGACGCGCCTGATTTATG ATGAATGGGTACGGCGTACCGAAACCTTTCTAGCCACAAAAAAATCGAGCGATAAACCGCCGCAACTGATGATTACGATT GAAGAAGCGCATAATTTTCTTACGCCCAGCCTGGCCAAACAAACCATTTTTGGCAAAATTGCCCGCGAATTACGCAAATA TTCGGTCACGTTGTTGGTGGTTGATCAACGGCCATCGTCGATTGATAACGAAGTGATGAGCCAACTTGGCTCGCGGATTA CTGCTTTGCTTAACGATGATCGTGATATTGATGCGGTATTTATGGGTGTTGGTGGCTCGAAAGGCTTGAAAACCGTGTTG GCCTCGCTTGATTCGCGCCAGCAAGCCATGATGTTGGGCCATGCCGTGCCGATGCCAGTGGTGATGCGTACCCGAGCCTA TGATAAAGCTTTTTATGAAGCGATGATGCAGGGTAATCGACGACGGCCTAAGCCTATTCCAATTACCGATGACGATGCTA ATGATGATTTATTTGGATCAAGGCAATAA
Upstream 100 bases:
>100_bases TGTGTCCTTCGTGGATCAAAACCTGACCAGCAAACCTGCATTGTTGCAGTCGCGCAGATGTGCTAAAATGAGGTACCGAG TTTGTACGGAGTTTTTGAGT
Downstream 100 bases:
>100_bases ACCATTCTTCCTAAACGTGATCAGTCAAAAGATGGAGATTGCTAGTTAAAAAGTACTTCGAGAGGGTTGACGATCAACTA GGAACAATGCTATAGTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Domain Protein; Nucleoside Triphosphate Hydrolase; Universally Conserved Protein
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MAHATRIGLVTSGSLLEGLTARLDERYEIERLRVGQFMVVQGRQNRFFSMLTDVQLAATSLSILADPPDDEHPLLREILA GRNTYGTFKLTPQLMLPEDSLETPRPVKTIPAHFAPIYEASEDDFGLVFGAEGDGKFQMGTPLDMDVPVCIDLERFVERS NGVFGKSGTGKSFLTRLLLCGVIKHNAASNLIFDMHSEYGWSGTTEDKIQEVKGLAQLFPGQVYIYTLDPESSRRRGVKY DGDITIGLNEIRVDDILLLQDALNLNPTAAESAFICAQRFGDDWIQKLRELDTEQLKEFVESTGANMSSMSALSRKLAQL EQLKFVTRKSSQSSIRQIIDALLAGKNVVVEFGQYRSELAYMLVSNILTRLIYDEWVRRTETFLATKKSSDKPPQLMITI EEAHNFLTPSLAKQTIFGKIARELRKYSVTLLVVDQRPSSIDNEVMSQLGSRITALLNDDRDIDAVFMGVGGSKGLKTVL ASLDSRQQAMMLGHAVPMPVVMRTRAYDKAFYEAMMQGNRRRPKPIPITDDDANDDLFGSRQ
Sequences:
>Translated_542_residues MAHATRIGLVTSGSLLEGLTARLDERYEIERLRVGQFMVVQGRQNRFFSMLTDVQLAATSLSILADPPDDEHPLLREILA GRNTYGTFKLTPQLMLPEDSLETPRPVKTIPAHFAPIYEASEDDFGLVFGAEGDGKFQMGTPLDMDVPVCIDLERFVERS NGVFGKSGTGKSFLTRLLLCGVIKHNAASNLIFDMHSEYGWSGTTEDKIQEVKGLAQLFPGQVYIYTLDPESSRRRGVKY DGDITIGLNEIRVDDILLLQDALNLNPTAAESAFICAQRFGDDWIQKLRELDTEQLKEFVESTGANMSSMSALSRKLAQL EQLKFVTRKSSQSSIRQIIDALLAGKNVVVEFGQYRSELAYMLVSNILTRLIYDEWVRRTETFLATKKSSDKPPQLMITI EEAHNFLTPSLAKQTIFGKIARELRKYSVTLLVVDQRPSSIDNEVMSQLGSRITALLNDDRDIDAVFMGVGGSKGLKTVL ASLDSRQQAMMLGHAVPMPVVMRTRAYDKAFYEAMMQGNRRRPKPIPITDDDANDDLFGSRQ >Mature_541_residues AHATRIGLVTSGSLLEGLTARLDERYEIERLRVGQFMVVQGRQNRFFSMLTDVQLAATSLSILADPPDDEHPLLREILAG RNTYGTFKLTPQLMLPEDSLETPRPVKTIPAHFAPIYEASEDDFGLVFGAEGDGKFQMGTPLDMDVPVCIDLERFVERSN GVFGKSGTGKSFLTRLLLCGVIKHNAASNLIFDMHSEYGWSGTTEDKIQEVKGLAQLFPGQVYIYTLDPESSRRRGVKYD GDITIGLNEIRVDDILLLQDALNLNPTAAESAFICAQRFGDDWIQKLRELDTEQLKEFVESTGANMSSMSALSRKLAQLE QLKFVTRKSSQSSIRQIIDALLAGKNVVVEFGQYRSELAYMLVSNILTRLIYDEWVRRTETFLATKKSSDKPPQLMITIE EAHNFLTPSLAKQTIFGKIARELRKYSVTLLVVDQRPSSIDNEVMSQLGSRITALLNDDRDIDAVFMGVGGSKGLKTVLA SLDSRQQAMMLGHAVPMPVVMRTRAYDKAFYEAMMQGNRRRPKPIPITDDDANDDLFGSRQ
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60612; Mature: 60481
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHATRIGLVTSGSLLEGLTARLDERYEIERLRVGQFMVVQGRQNRFFSMLTDVQLAATS CCCCEEEEEEECCHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHH LSILADPPDDEHPLLREILAGRNTYGTFKLTPQLMLPEDSLETPRPVKTIPAHFAPIYEA HEEEECCCCCCCHHHHHHHCCCCCCCEEEECCEEECCCCCCCCCCCCHHCCCHHHHCCCC SEDDFGLVFGAEGDGKFQMGTPLDMDVPVCIDLERFVERSNGVFGKSGTGKSFLTRLLLC CCCCCEEEEECCCCCCEECCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCHHHHHHHHHH GVIKHNAASNLIFDMHSEYGWSGTTEDKIQEVKGLAQLFPGQVYIYTLDPESSRRRGVKY HHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHHHCCCCC DGDITIGLNEIRVDDILLLQDALNLNPTAAESAFICAQRFGDDWIQKLRELDTEQLKEFV CCCEEEEECCEEHHHHHEEHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHH ESTGANMSSMSALSRKLAQLEQLKFVTRKSSQSSIRQIIDALLAGKNVVVEFGQYRSELA HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHEEHHHHHHHHHH YMLVSNILTRLIYDEWVRRTETFLATKKSSDKPPQLMITIEEAHNFLTPSLAKQTIFGKI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHH ARELRKYSVTLLVVDQRPSSIDNEVMSQLGSRITALLNDDRDIDAVFMGVGGSKGLKTVL HHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH ASLDSRQQAMMLGHAVPMPVVMRTRAYDKAFYEAMMQGNRRRPKPIPITDDDANDDLFGS HHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC RQ CC >Mature Secondary Structure AHATRIGLVTSGSLLEGLTARLDERYEIERLRVGQFMVVQGRQNRFFSMLTDVQLAATS CCCEEEEEEECCHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHH LSILADPPDDEHPLLREILAGRNTYGTFKLTPQLMLPEDSLETPRPVKTIPAHFAPIYEA HEEEECCCCCCCHHHHHHHCCCCCCCEEEECCEEECCCCCCCCCCCCHHCCCHHHHCCCC SEDDFGLVFGAEGDGKFQMGTPLDMDVPVCIDLERFVERSNGVFGKSGTGKSFLTRLLLC CCCCCEEEEECCCCCCEECCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCHHHHHHHHHH GVIKHNAASNLIFDMHSEYGWSGTTEDKIQEVKGLAQLFPGQVYIYTLDPESSRRRGVKY HHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHHHCCCCC DGDITIGLNEIRVDDILLLQDALNLNPTAAESAFICAQRFGDDWIQKLRELDTEQLKEFV CCCEEEEECCEEHHHHHEEHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHH ESTGANMSSMSALSRKLAQLEQLKFVTRKSSQSSIRQIIDALLAGKNVVVEFGQYRSELA HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHEEHHHHHHHHHH YMLVSNILTRLIYDEWVRRTETFLATKKSSDKPPQLMITIEEAHNFLTPSLAKQTIFGKI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHH ARELRKYSVTLLVVDQRPSSIDNEVMSQLGSRITALLNDDRDIDAVFMGVGGSKGLKTVL HHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH ASLDSRQQAMMLGHAVPMPVVMRTRAYDKAFYEAMMQGNRRRPKPIPITDDDANDDLFGS HHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC RQ CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA