Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159899053

Identifier: 159899053

GI number: 159899053

Start: 3240282

End: 3240839

Strand: Reverse

Name: 159899053

Synonym: Haur_2534

Alternate gene names: NA

Gene position: 3240839-3240282 (Counterclockwise)

Preceding gene: 159899054

Following gene: 159899051

Centisome position: 51.06

GC content: 45.52

Gene sequence:

>558_bases
ATGTTTGATCCACGAAGAGCACGAGGAACACGAAGGGCGAAACCGCGAAGGCCACGAAGAACGCGAAATAGGGTAATAGG
CTATGGGCTATCGCAAATTTCTTATCGAATTCGCGAGTTGTCGATGAGTTTGCACATTGGCTTGTATGGCAGTCATGACA
CTGAATTAATCGAAGCTGTGCAAAGCGTGTGCACGCTCTTAGGTGGTGATTTAGTGCTGCTTGATGCGGTTCCTGCTGAT
TCTGAGCCTAAATCTGTGCAAGTATTAATTTGGTATATGGGGCAGCACCCCATTAAACTATCAATTGAGCAACAGCAATG
GTTAAATATCTATATTCTGAGACAACGCCGCATAACAAAAGCACTTGTGAACGATCTCGTTTTTGATGGAACCGTCATCT
TTGAACAGTATATGATTTTTCCGTTCGATCCTGAAGAATTTGCGATGCGAATTATTAACGGCTCGCTGCGACGTGGTTAT
CAGCTTGATTATCGGCTTGATTATCGCTTGCGGACGTTTGCAGATGCGTGTGAGGTGAGGGCGAAGCGCTCCAGCTAA

Upstream 100 bases:

>100_bases
GCTCACGTTGGGACGAGCTGCGTGGCGGCTCGTTGCTAACCAAATTGATCAATAGCGACCGCGATTTAGATATTTTTGTG
CTCGCCGATGCACCGCAGTA

Downstream 100 bases:

>100_bases
GTGCTCATAAGGTTGGCAGTAAATTTTTTTTCCTCACCCCCTAGCTCCCTCTCCCGCACGCGAGGCGAGGGGAACCACCA
ATCTAGAAGCCCCTCGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MFDPRRARGTRRAKPRRPRRTRNRVIGYGLSQISYRIRELSMSLHIGLYGSHDTELIEAVQSVCTLLGGDLVLLDAVPAD
SEPKSVQVLIWYMGQHPIKLSIEQQQWLNIYILRQRRITKALVNDLVFDGTVIFEQYMIFPFDPEEFAMRIINGSLRRGY
QLDYRLDYRLRTFADACEVRAKRSS

Sequences:

>Translated_185_residues
MFDPRRARGTRRAKPRRPRRTRNRVIGYGLSQISYRIRELSMSLHIGLYGSHDTELIEAVQSVCTLLGGDLVLLDAVPAD
SEPKSVQVLIWYMGQHPIKLSIEQQQWLNIYILRQRRITKALVNDLVFDGTVIFEQYMIFPFDPEEFAMRIINGSLRRGY
QLDYRLDYRLRTFADACEVRAKRSS
>Mature_185_residues
MFDPRRARGTRRAKPRRPRRTRNRVIGYGLSQISYRIRELSMSLHIGLYGSHDTELIEAVQSVCTLLGGDLVLLDAVPAD
SEPKSVQVLIWYMGQHPIKLSIEQQQWLNIYILRQRRITKALVNDLVFDGTVIFEQYMIFPFDPEEFAMRIINGSLRRGY
QLDYRLDYRLRTFADACEVRAKRSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21637; Mature: 21637

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDPRRARGTRRAKPRRPRRTRNRVIGYGLSQISYRIRELSMSLHIGLYGSHDTELIEAV
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHEEEEEEEECCCHHHHHHHH
QSVCTLLGGDLVLLDAVPADSEPKSVQVLIWYMGQHPIKLSIEQQQWLNIYILRQRRITK
HHHHHHHCCCEEEEECCCCCCCCCEEEEEEEEECCCCEEEEECHHHHEEEEEEHHHHHHH
ALVNDLVFDGTVIFEQYMIFPFDPEEFAMRIINGSLRRGYQLDYRLDYRLRTFADACEVR
HHHHHHHHCCCEEEEHEEECCCCHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHH
AKRSS
HCCCC
>Mature Secondary Structure
MFDPRRARGTRRAKPRRPRRTRNRVIGYGLSQISYRIRELSMSLHIGLYGSHDTELIEAV
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHEEEEEEEECCCHHHHHHHH
QSVCTLLGGDLVLLDAVPADSEPKSVQVLIWYMGQHPIKLSIEQQQWLNIYILRQRRITK
HHHHHHHCCCEEEEECCCCCCCCCEEEEEEEEECCCCEEEEECHHHHEEEEEEHHHHHHH
ALVNDLVFDGTVIFEQYMIFPFDPEEFAMRIINGSLRRGYQLDYRLDYRLRTFADACEVR
HHHHHHHHCCCEEEEHEEECCCCHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHH
AKRSS
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA