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The map label for this gene is nifU [H]

Identifier: 159899050

GI number: 159899050

Start: 3235193

End: 3235639

Strand: Reverse

Name: nifU [H]

Synonym: Haur_2531

Alternate gene names: 159899050

Gene position: 3235639-3235193 (Counterclockwise)

Preceding gene: 159899051

Following gene: 159899049

Centisome position: 50.98

GC content: 52.8

Gene sequence:

>447_bases
GTGGATCGCCAAGAAGCTATCGAGTTTTTGCTCGAACATTATGAACAACCGCGCCATCGCGGCGAATTGGCCGATCCGGA
TGTGACCATGCCTGGTGGTAATCCTGGTTGCGGCGATGTCGTAACAATCTATCTTAAGGTCGATGCCGCTAACGATGCAA
TTCAAGATCTGGCTTTTGTTGGCGAGGGCTGCACGATCAGCCAAGCCGCCGCCTCGATTTTGCTCGAACAAATGCAGGGC
CAAGCATTGGCAGCGATTGAAGCCTTGGATTTTAATTGGATGATCGATGAGTTGGGCCGTGAGGTGGTGCAATCGCGCCC
GCGTTGCGCAACCTTGGCTTTGGGCACACTCAAGGCAGCGATCAAAAAATATCGTAACGATCAGATTCGGGCTGAGCTTG
GCGAAAACGCCCCGACCCAGACCGCGCCTGAAACATTCTCAAATTAA

Upstream 100 bases:

>100_bases
ACCACTCGTTGCGGGTGGTGTTTTGCTATTTAGCTAGCCAATTTTGCAGGAGAATCGTGTACAATAGAAATAGAAATCAG
CACCAGTTATGGAGGCGAAT

Downstream 100 bases:

>100_bases
TCACGCCAATTGGTGTGGACGATAGGAAGGAAACTCAATGCTTAGTGATGATATGGTTCGTTCAGCGCTCAAAAACGTCG
TTGACCCCGAAATTGGGGTG

Product: NifU family SUF system FeS assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MDRQEAIEFLLEHYEQPRHRGELADPDVTMPGGNPGCGDVVTIYLKVDAANDAIQDLAFVGEGCTISQAAASILLEQMQG
QALAAIEALDFNWMIDELGREVVQSRPRCATLALGTLKAAIKKYRNDQIRAELGENAPTQTAPETFSN

Sequences:

>Translated_148_residues
MDRQEAIEFLLEHYEQPRHRGELADPDVTMPGGNPGCGDVVTIYLKVDAANDAIQDLAFVGEGCTISQAAASILLEQMQG
QALAAIEALDFNWMIDELGREVVQSRPRCATLALGTLKAAIKKYRNDQIRAELGENAPTQTAPETFSN
>Mature_148_residues
MDRQEAIEFLLEHYEQPRHRGELADPDVTMPGGNPGCGDVVTIYLKVDAANDAIQDLAFVGEGCTISQAAASILLEQMQG
QALAAIEALDFNWMIDELGREVVQSRPRCATLALGTLKAAIKKYRNDQIRAELGENAPTQTAPETFSN

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Escherichia coli, GI1788878, Length=124, Percent_Identity=32.258064516129, Blast_Score=61, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6325122, Length=137, Percent_Identity=31.3868613138686, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 16131; Mature: 16131

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRQEAIEFLLEHYEQPRHRGELADPDVTMPGGNPGCGDVVTIYLKVDAANDAIQDLAFV
CCHHHHHHHHHHHHHCHHHCCCCCCCCEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHH
GEGCTISQAAASILLEQMQGQALAAIEALDFNWMIDELGREVVQSRPRCATLALGTLKAA
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IKKYRNDQIRAELGENAPTQTAPETFSN
HHHHCCHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDRQEAIEFLLEHYEQPRHRGELADPDVTMPGGNPGCGDVVTIYLKVDAANDAIQDLAFV
CCHHHHHHHHHHHHHCHHHCCCCCCCCEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHH
GEGCTISQAAASILLEQMQGQALAAIEALDFNWMIDELGREVVQSRPRCATLALGTLKAA
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IKKYRNDQIRAELGENAPTQTAPETFSN
HHHHCCHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]